BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0321.p (296 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004753277.1| chloramphenicol-sensitive protein [Collimona... 338 8e-91 ref|ZP_06841485.1| RarD protein, DMT superfamily transporter [Bu... 335 4e-90 ref|YP_555250.1| RarD protein [Burkholderia xenovorans LB400] >g... 335 7e-90 ref|YP_001860289.1| transporter DMT superfamily protein [Burkhol... 333 1e-89 ref|YP_001890702.1| RarD protein, DMT superfamily transporter [B... 332 5e-89 >ref|YP_004753277.1| chloramphenicol-sensitive protein [Collimonas fungivorans Ter331] gb|AEK62454.1| Chloramphenicol-sensitive protein [Collimonas fungivorans Ter331] Length = 304 Score = 338 bits (866), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 186/296 (62%), Positives = 232/296 (78%) Query: 1 MNHSETARGIALSVTASLLFALLSAYTSWLTPLDGLDIFAWRILWTLPPALLLIVWRKHG 60 MN E RGI+LS+ AS+LFAL+S YT L PLDGLDIFAWR++WTLP AL L+V R+ Sbjct: 1 MNQHEIGRGISLSIGASMLFALMSGYTRLLAPLDGLDIFAWRVVWTLPAALALLVLRQRL 60 Query: 61 AQLRDAVVALLRSPLQALLFVAMTAMLGVQLWLFLWAPVNGRALEVSLGYFLLPLAMVLI 120 Q R + L R PL + + + A+LGVQLW+FLWAP++GRALEVSLGYFLLPL MVL+ Sbjct: 61 PQARALLCRLAREPLTCVALLVVVALLGVQLWIFLWAPLHGRALEVSLGYFLLPLTMVLV 120 Query: 121 GRFYYHERLDVWQRIAVVCAIIGVLHELWMTRAFSWPTLLVALGYPPYFMMRRRLKLDSM 180 GRFYYHERLD++Q +AV CA+IGVLHELW+TR+F+WPTL+VALGYPPYF++RR++ D + Sbjct: 121 GRFYYHERLDLFQWLAVACAVIGVLHELWLTRSFAWPTLVVALGYPPYFILRRKINADPV 180 Query: 181 VIFIMEIFLLTPVALYTLAISPNLAGVWQRPDMYLMLLPGLGLLSTVALDCYLRASRLLP 240 V F +E+ LL PVA+ L + + V RPDM+L LLPGLG+LSTVAL Y ASRLLP Sbjct: 181 VAFALEMALLLPVAVVMLYARDSWSVVAHRPDMWLFLLPGLGMLSTVALGAYQGASRLLP 240 Query: 241 MGLFGILGYVEPVLLVVVAIILLDETVSAAQLWTYIPIWMSVGFTAIHSVRLMQRR 296 M LFGILGYVEPVLLV VAI+ L E+++ QL TYIPIW +V TA+HSVRL+++ Sbjct: 241 MALFGILGYVEPVLLVGVAIVFLGESMAPGQLATYIPIWCAVLLTALHSVRLLRKE 296 >ref|ZP_06841485.1| RarD protein, DMT superfamily transporter [Burkholderia sp. Ch1-1] gb|EFG71011.1| RarD protein, DMT superfamily transporter [Burkholderia sp. Ch1-1] Length = 298 Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 185/294 (62%), Positives = 223/294 (75%) Query: 1 MNHSETARGIALSVTASLLFALLSAYTSWLTPLDGLDIFAWRILWTLPPALLLIVWRKHG 60 MN + RGIALSV AS +FALLSAY + L PL GLDIFAWRI+WT+P ALLLI RK Sbjct: 1 MNQYDPKRGIALSVGASAMFALLSAYATLLAPLSGLDIFAWRIVWTVPGALLLIALRKRL 60 Query: 61 AQLRDAVVALLRSPLQALLFVAMTAMLGVQLWLFLWAPVNGRALEVSLGYFLLPLAMVLI 120 LR + ++ P A+LG QLW+FLWAP++GR LEVSLGYFLLPL MVL+ Sbjct: 61 PILRQLLYRMVTEPRLGAAMTVSAALLGAQLWVFLWAPLHGRMLEVSLGYFLLPLVMVLV 120 Query: 121 GRFYYHERLDVWQRIAVVCAIIGVLHELWMTRAFSWPTLLVALGYPPYFMMRRRLKLDSM 180 GRFYYHERLD Q +AV CA GV HELWMT AFSWPTLLVALGYPPYF++RR++ DS+ Sbjct: 121 GRFYYHERLDGLQWLAVACAAAGVGHELWMTGAFSWPTLLVALGYPPYFVLRRKINQDSL 180 Query: 181 VIFIMEIFLLTPVALYTLAISPNLAGVWQRPDMYLMLLPGLGLLSTVALDCYLRASRLLP 240 +F +E+ LL PVA+ S +LA + R DM+ +LLPGLG LST+AL YL+ASRLLP Sbjct: 181 AMFTVEMMLLLPVAIVLAFSSDSLALIVGRADMWCLLLPGLGALSTIALASYLKASRLLP 240 Query: 241 MGLFGILGYVEPVLLVVVAIILLDETVSAAQLWTYIPIWMSVGFTAIHSVRLMQ 294 + LFGILGYVEPVLLV+V+I LL ET+ AAQL TYIPIW++V TA+HSVRL++ Sbjct: 241 VALFGILGYVEPVLLVLVSITLLGETLGAAQLATYIPIWIAVALTALHSVRLVR 294 >ref|YP_555250.1| RarD protein [Burkholderia xenovorans LB400] gb|ABE35900.1| RarD protein [Burkholderia xenovorans LB400] Length = 298 Score = 335 bits (858), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 184/294 (62%), Positives = 222/294 (75%) Query: 1 MNHSETARGIALSVTASLLFALLSAYTSWLTPLDGLDIFAWRILWTLPPALLLIVWRKHG 60 MN + RGIALSV AS +FALLSAY + L PL GLDIFAWRI+WT+P ALLLI RK Sbjct: 1 MNQYDPKRGIALSVGASAMFALLSAYATLLAPLSGLDIFAWRIVWTVPGALLLIALRKRL 60 Query: 61 AQLRDAVVALLRSPLQALLFVAMTAMLGVQLWLFLWAPVNGRALEVSLGYFLLPLAMVLI 120 LR + ++ P A+LG QLW+FLWAP++GR LEVSLGYFLLPL MVL+ Sbjct: 61 PILRQLLYRMVTEPTLGAAMTVSAALLGAQLWVFLWAPLHGRMLEVSLGYFLLPLVMVLV 120 Query: 121 GRFYYHERLDVWQRIAVVCAIIGVLHELWMTRAFSWPTLLVALGYPPYFMMRRRLKLDSM 180 GRFYYHERLD Q +AV CA GV HELWMT AFSWPTLLVALGYPPYF++RR++ DS+ Sbjct: 121 GRFYYHERLDGLQWLAVACAAAGVGHELWMTGAFSWPTLLVALGYPPYFVLRRKINQDSL 180 Query: 181 VIFIMEIFLLTPVALYTLAISPNLAGVWQRPDMYLMLLPGLGLLSTVALDCYLRASRLLP 240 +F +E+ LL PVA+ S +LA + R DM+ +LLPGLG LST+AL YL+ASRLLP Sbjct: 181 AMFTVEMMLLLPVAIVMALGSDSLALIAGRADMWCLLLPGLGALSTIALASYLKASRLLP 240 Query: 241 MGLFGILGYVEPVLLVVVAIILLDETVSAAQLWTYIPIWMSVGFTAIHSVRLMQ 294 + LFGILGYVEPVLLV+V+I LL ET+ AAQL TYIPIW++V TA+H VRL++ Sbjct: 241 VALFGILGYVEPVLLVLVSITLLGETLGAAQLATYIPIWIAVALTALHGVRLVR 294 >ref|YP_001860289.1| transporter DMT superfamily protein [Burkholderia phymatum STM815] gb|ACC73243.1| RarD protein, DMT superfamily transporter [Burkholderia phymatum STM815] Length = 296 Score = 333 bits (855), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 184/296 (62%), Positives = 224/296 (75%) Query: 1 MNHSETARGIALSVTASLLFALLSAYTSWLTPLDGLDIFAWRILWTLPPALLLIVWRKHG 60 MN RGIALSV+AS LFALLS Y LTPL GLDIFAWR++WT+P A LI R Sbjct: 1 MNAYRPGRGIALSVSASTLFALLSVYAKLLTPLTGLDIFAWRVIWTVPGAFTLIALRSRL 60 Query: 61 AQLRDAVVALLRSPLQALLFVAMTAMLGVQLWLFLWAPVNGRALEVSLGYFLLPLAMVLI 120 QL+ + +R P ALL VA +LG QLW+FLWAP++GR LEVSLGYFLLPL MVL+ Sbjct: 61 PQLQMLLQRAIREPRTALLLVASAILLGAQLWVFLWAPLHGRMLEVSLGYFLLPLTMVLL 120 Query: 121 GRFYYHERLDVWQRIAVVCAIIGVLHELWMTRAFSWPTLLVALGYPPYFMMRRRLKLDSM 180 GRFYYHERL+ Q +AV CA +GVLHELW+TRAFSWPTLLVA+GYPPYF++RR++ DS+ Sbjct: 121 GRFYYHERLEPLQWLAVGCAAVGVLHELWVTRAFSWPTLLVAIGYPPYFVLRRKINADSL 180 Query: 181 VIFIMEIFLLTPVALYTLAISPNLAGVWQRPDMYLMLLPGLGLLSTVALDCYLRASRLLP 240 F +E+ L+ P AL + A + R DM+L+LLPGLG LSTVAL YL+ASRLLP Sbjct: 181 TAFALEMSLMLPFALAMAFSGGSFALLSGRVDMWLLLLPGLGALSTVALATYLKASRLLP 240 Query: 241 MGLFGILGYVEPVLLVVVAIILLDETVSAAQLWTYIPIWMSVGFTAIHSVRLMQRR 296 M LFGILGYVEPVLLV+V++ LL ET++A QL TY+PIW++VG TA+HS RL+ R Sbjct: 241 MALFGILGYVEPVLLVIVSVTLLGETLTAQQLGTYVPIWIAVGLTALHSARLLAPR 296 >ref|YP_001890702.1| RarD protein, DMT superfamily transporter [Burkholderia phytofirmans PsJN] gb|ACD21331.1| RarD protein, DMT superfamily transporter [Burkholderia phytofirmans PsJN] Length = 298 Score = 332 bits (850), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 172/294 (58%), Positives = 222/294 (75%) Query: 1 MNHSETARGIALSVTASLLFALLSAYTSWLTPLDGLDIFAWRILWTLPPALLLIVWRKHG 60 MN + RGIALSV A+ FALLSAY + L PL GLDIFAWR++WT+P ALLL+ RK Sbjct: 1 MNQYDLRRGIALSVCATTTFALLSAYATLLAPLSGLDIFAWRVIWTVPGALLLVALRKRL 60 Query: 61 AQLRDAVVALLRSPLQALLFVAMTAMLGVQLWLFLWAPVNGRALEVSLGYFLLPLAMVLI 120 LR + ++ P + + A+LGVQLW+FLWAP++GR LEVSLGYFL+PL MVL+ Sbjct: 61 PILRRLLYRMVTEPKLGMAMIVSAALLGVQLWVFLWAPLHGRMLEVSLGYFLMPLTMVLV 120 Query: 121 GRFYYHERLDVWQRIAVVCAIIGVLHELWMTRAFSWPTLLVALGYPPYFMMRRRLKLDSM 180 GRFYYHERLD Q +AV CA GV HELW+T AFSWPTLLV+LGYPPYF++RR++ DS+ Sbjct: 121 GRFYYHERLDGLQWLAVACAATGVGHELWVTGAFSWPTLLVSLGYPPYFVLRRKINHDSL 180 Query: 181 VIFIMEIFLLTPVALYTLAISPNLAGVWQRPDMYLMLLPGLGLLSTVALDCYLRASRLLP 240 +F +E+ LL P A+ + +LA + P + +LLPGLG LST+AL YL+ASRLLP Sbjct: 181 AMFTVEMALLLPPAIALVFNGGSLAMIAGHPGRWWLLLPGLGALSTIALASYLKASRLLP 240 Query: 241 MGLFGILGYVEPVLLVVVAIILLDETVSAAQLWTYIPIWMSVGFTAIHSVRLMQ 294 + LFGILGYVEPVLLV+++I +L ET+S +QL TY+PIW++V TA+HSVRL++ Sbjct: 241 VALFGILGYVEPVLLVLISITVLGETLSVSQLATYVPIWIAVALTALHSVRLVR 294