BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0317.p         (126 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004754642.1| acetylornithine deacetylase [Collimonas fung...   124   5e-27
ref|ZP_08272558.1| Acetylornithine deacetylase [Oxalobacteraceae...   121   4e-26
ref|YP_549342.1| acetylornithine deacetylase [Polaromonas sp. JS...   120   7e-26
ref|YP_003776602.1| acetylornithine deacetylase [Herbaspirillum ...   119   1e-25
emb|CCA85192.1| N-acetylornithine deacetylase [Ralstonia syzygii...   104   4e-21

>ref|YP_004754642.1| acetylornithine deacetylase [Collimonas fungivorans Ter331]
 gb|AAT42421.1| acetylornithine deacetylase [Collimonas fungivorans Ter331]
 gb|AEK63819.1| Acetylornithine deacetylase [Collimonas fungivorans Ter331]
          Length = 395

 Score =  124 bits (311), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 58/82 (70%), Positives = 63/82 (76%)

Query: 3  LNELIGFKTVSRDSNLGLIEWARDYLQALGASVRLTYDRSTKKANLFATYGEGPGFGTVF 62
          +  LI F+TVSRDSNLGLIEW RDYL  LG   RLTYD S KKANLFAT GEGP  G + 
Sbjct: 16 IERLIAFQTVSRDSNLGLIEWTRDYLAGLGVKSRLTYDASGKKANLFATLGEGPKPGLIL 75

Query: 63 SGHTDVVPADGQNWDSDPFIAT 84
          SGHTDVVP +GQ WD+DPF AT
Sbjct: 76 SGHTDVVPVEGQVWDTDPFQAT 97


>ref|ZP_08272558.1| Acetylornithine deacetylase [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF33983.1| Acetylornithine deacetylase [Oxalobacteraceae bacterium IMCC9480]
          Length = 393

 Score =  121 bits (303), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 57/84 (67%), Positives = 63/84 (75%)

Query: 3  LNELIGFKTVSRDSNLGLIEWARDYLQALGASVRLTYDRSTKKANLFATYGEGPGFGTVF 62
          +  L+GF TVSRDSNLGLIEW RDYL  +G + RLTYD + KKANLFAT G G   G V 
Sbjct: 16 IERLVGFPTVSRDSNLGLIEWVRDYLAGMGVTSRLTYDSTGKKANLFATAGGGSRAGLVL 75

Query: 63 SGHTDVVPADGQNWDSDPFIATRV 86
          SGHTDVVP DGQ WD+DPF AT V
Sbjct: 76 SGHTDVVPVDGQAWDTDPFKATVV 99


>ref|YP_549342.1| acetylornithine deacetylase [Polaromonas sp. JS666]
 gb|ABE44444.1| acetylornithine deacetylase / acetylornithine deacetylase ArgE,
           Metallo peptidase, MEROPS family M20A [Polaromonas sp.
           JS666]
          Length = 403

 Score =  120 bits (301), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 58/84 (69%), Positives = 62/84 (73%)

Query: 3   LNELIGFKTVSRDSNLGLIEWARDYLQALGASVRLTYDRSTKKANLFATYGEGPGFGTVF 62
           +  LI F TVSRDSNLGLIEW RDYL  +G   RLTYD + KKANLFAT GEG   G V 
Sbjct: 22  IERLIAFPTVSRDSNLGLIEWTRDYLAQMGVKSRLTYDSTGKKANLFATLGEGRRPGLVL 81

Query: 63  SGHTDVVPADGQNWDSDPFIATRV 86
           SGHTDVVP DGQ WD+DPF AT V
Sbjct: 82  SGHTDVVPVDGQAWDTDPFKATVV 105


>ref|YP_003776602.1| acetylornithine deacetylase [Herbaspirillum seropedicae SmR1]
 gb|ADJ64694.1| acetylornithine deacetylase protein [Herbaspirillum seropedicae
           SmR1]
          Length = 400

 Score =  119 bits (298), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 59/83 (71%), Positives = 66/83 (79%), Gaps = 2/83 (2%)

Query: 3   LNELIGFKTVSRDSNLGLIEWARDYLQALGASVRLTYDRSTKKANLFATYGE-GPG-FGT 60
           L  LIGF TVSR+SNLGLIEW RD+L+  GA  RLTYD   +KANLFAT G+ GPG FGT
Sbjct: 20  LTTLIGFNTVSRESNLGLIEWVRDHLERHGAVTRLTYDAERRKANLFATLGDAGPGRFGT 79

Query: 61  VFSGHTDVVPADGQNWDSDPFIA 83
           VFSGHTDVVP  GQ WD+DPF+A
Sbjct: 80  VFSGHTDVVPVTGQKWDTDPFVA 102


>emb|CCA85192.1| N-acetylornithine deacetylase [Ralstonia syzygii R24]
          Length = 399

 Score =  104 bits (260), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 52/81 (64%), Positives = 58/81 (71%)

Query: 3   LNELIGFKTVSRDSNLGLIEWARDYLQALGASVRLTYDRSTKKANLFATYGEGPGFGTVF 62
           +  L+ F TVSR SNLGLIEW RD L+A GA+ RLTYD +  KANLFAT   G   G V 
Sbjct: 20  IRTLVAFDTVSRHSNLGLIEWVRDRLRAQGAACRLTYDAAGCKANLFATLSPGRKPGLVL 79

Query: 63  SGHTDVVPADGQNWDSDPFIA 83
           SGHTDVVP DGQ WD+DPF A
Sbjct: 80  SGHTDVVPVDGQPWDTDPFDA 100