BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0315.p (252 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_02487615.1| putative MmgE/PrpD family protein [Burkholder... 190 2e-46 ref|ZP_04520755.1| MmgE/PrpD family protein [Burkholderia pseudo... 189 4e-46 ref|ZP_01765718.1| conserved hypothetical protein [Burkholderia ... 186 3e-45 ref|YP_003740142.1| MmgE/PrpD family protein [Erwinia billingiae... 173 3e-41 gb|AEM42806.1| MmgE/PrpD family protein [Ketogulonigenium vulgar... 169 2e-40 >ref|ZP_02487615.1| putative MmgE/PrpD family protein [Burkholderia pseudomallei 7894] ref|ZP_02493147.1| putative MmgE/PrpD family protein [Burkholderia pseudomallei NCTC 13177] ref|ZP_02511777.1| putative MmgE/PrpD family protein [Burkholderia pseudomallei BCC215] ref|ZP_03450676.1| MmgE/PrpD family protein [Burkholderia pseudomallei 576] gb|EEC38488.1| MmgE/PrpD family protein [Burkholderia pseudomallei 576] Length = 465 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 105/237 (44%), Positives = 147/237 (62%), Gaps = 1/237 (0%) Query: 15 RAHTAITDVVGCLLGGRDDVAVVNAGRFLRAAESAGRAGVITQQATVGAPWAALVNGCAA 74 RA A +D + C++ G D +R AG A + A V APWAA+VNG AA Sbjct: 25 RAEHAFSDTIACMVAGSADAVSHKVSDAVRRW-GAGSATIFGSDAKVAAPWAAMVNGTAA 83 Query: 75 HALDFDDNFFPPVTHASASLVPALFALAEETGADAAAIVHAYIVGLEVEAQIGKRMNPSH 134 H L+ DDN++P +THASA LVPAL AL EE AD A++ A+IVGLE+ A +G+ +N SH Sbjct: 84 HVLEIDDNYYPALTHASAILVPALIALGEEIHADGHALLDAFIVGLEMHAFLGRGVNRSH 143 Query: 135 YASGWHATSTIGAIGVAAACAVLLRLSEKGVLHAISIGSSLAGGSKRQFGSMVKPMHAGF 194 Y +GWH T+T+G IG AAACA L+ L ++ ++ A+S+ +S+A G+K QFG+ K G Sbjct: 144 YFAGWHPTATLGCIGTAAACARLMGLDKESIVAAMSLATSMASGNKAQFGTEAKSFQCGM 203 Query: 195 AAMHGVLAARLAASGITGVEEMLQGKWSLSELYAGGTQDGDSAASLFPHAPLAIDEY 251 A + ++AARLAA+G+TG E+L+ LY G G A PLA++E+ Sbjct: 204 GASNSIVAARLAAAGLTGNPEVLEDPQGFLALYGGSAPRGWDAPLHKLGGPLALEEF 260 >ref|ZP_04520755.1| MmgE/PrpD family protein [Burkholderia pseudomallei MSHR346] gb|EEP49669.1| MmgE/PrpD family protein [Burkholderia pseudomallei MSHR346] Length = 465 Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 104/237 (43%), Positives = 146/237 (61%), Gaps = 1/237 (0%) Query: 15 RAHTAITDVVGCLLGGRDDVAVVNAGRFLRAAESAGRAGVITQQATVGAPWAALVNGCAA 74 RA A +D + C++ G D +R AG + A V APWAA+VNG AA Sbjct: 25 RAEHAFSDTIACMVAGSADAVSHKVSDAVRRW-GAGSTTIFGSDAKVAAPWAAMVNGTAA 83 Query: 75 HALDFDDNFFPPVTHASASLVPALFALAEETGADAAAIVHAYIVGLEVEAQIGKRMNPSH 134 H L+ DDN++P +THASA LVPAL AL EE AD A++ A+IVGLE+ A +G+ +N SH Sbjct: 84 HVLEIDDNYYPALTHASAILVPALIALGEEIHADGHALLDAFIVGLEMHAFLGRGVNRSH 143 Query: 135 YASGWHATSTIGAIGVAAACAVLLRLSEKGVLHAISIGSSLAGGSKRQFGSMVKPMHAGF 194 Y +GWH T+T+G IG AAACA L+ L ++ ++ A+S+ +S+A G+K QFG+ K G Sbjct: 144 YFAGWHPTATLGCIGTAAACARLMGLDKESIVAAMSLATSMASGNKAQFGTEAKSFQCGM 203 Query: 195 AAMHGVLAARLAASGITGVEEMLQGKWSLSELYAGGTQDGDSAASLFPHAPLAIDEY 251 A + ++AARLAA+G+TG E+L+ LY G G A PLA++E+ Sbjct: 204 GASNSIVAARLAAAGLTGNPEVLEDPQGFLALYGGSAPRGWDAPLHKLGGPLALEEF 260 >ref|ZP_01765718.1| conserved hypothetical protein [Burkholderia pseudomallei 305] gb|EBA49505.1| conserved hypothetical protein [Burkholderia pseudomallei 305] Length = 465 Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 100/220 (45%), Positives = 139/220 (63%), Gaps = 1/220 (0%) Query: 15 RAHTAITDVVGCLLGGRDDVAVVNAGRFLRAAESAGRAGVITQQATVGAPWAALVNGCAA 74 RA A +D + C++ G D +R AG A + A V APWAA+VNG AA Sbjct: 25 RAEHAFSDTIACMVAGSADAVSHKVSDAVRRW-GAGSATIFGSDAKVAAPWAAMVNGTAA 83 Query: 75 HALDFDDNFFPPVTHASASLVPALFALAEETGADAAAIVHAYIVGLEVEAQIGKRMNPSH 134 H L+ DDN++P +THASA LVPAL AL EE AD A++ A+IVGLE+ A +G+ +N SH Sbjct: 84 HVLEIDDNYYPALTHASAILVPALIALGEEIHADGHALLDAFIVGLEMHAFLGRGVNRSH 143 Query: 135 YASGWHATSTIGAIGVAAACAVLLRLSEKGVLHAISIGSSLAGGSKRQFGSMVKPMHAGF 194 Y +GWH T+T+G IG AAACA L+ L ++ ++ A+S+ +S+A G+K QFG+ K G Sbjct: 144 YFAGWHPTATLGCIGTAAACARLMGLDKESIVAAMSLATSMASGNKAQFGTEAKSFQCGM 203 Query: 195 AAMHGVLAARLAASGITGVEEMLQGKWSLSELYAGGTQDG 234 A + ++AARLAA+G+TG E+L+ LY G G Sbjct: 204 GASNSIVAARLAAAGLTGNPEVLEDPQGFLALYGGSAPRG 243 >ref|YP_003740142.1| MmgE/PrpD family protein [Erwinia billingiae Eb661] emb|CAX58283.1| MmgE/PrpD family protein [Erwinia billingiae Eb661] Length = 436 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 101/218 (46%), Positives = 141/218 (64%), Gaps = 12/218 (5%) Query: 12 AHPRAHTAITDVVGCLLGGRDDVAVVNAGRFLRAAESAGRAGVITQQATVGAPWAALVNG 71 AH A AI+D +GCL GR+D + + +R A S G T A + AL+N Sbjct: 22 AHRLAKEAISDTLGCLYAGREDYSTLA----VRQAWS----GYQTPPAAI----VALINA 69 Query: 72 CAAHALDFDDNFFPPVTHASASLVPALFALAEETGADAAAIVHAYIVGLEVEAQIGKRMN 131 +AHA+D+DDNF P ++HASA LVPAL A+A + A+ A+V+AY++GL+ +A +G ++ Sbjct: 70 TSAHAIDYDDNFGPGMSHASAVLVPALLAVALQEEANGEALVNAYLIGLQAQAFVGDMVS 129 Query: 132 PSHYASGWHATSTIGAIGVAAACAVLLRLSEKGVLHAISIGSSLAGGSKRQFGSMVKPMH 191 SHY +GWH TSTIG IG AA A L L + G+ A+SI SLA G K QFG+ +KP H Sbjct: 130 SSHYTAGWHGTSTIGCIGTAAGVAWLKGLDQAGIGRALSIAVSLASGVKGQFGTPLKPFH 189 Query: 192 AGFAAMHGVLAARLAASGITGVEEMLQGKWSLSELYAG 229 AG AA + V AA LAA+G++G ++L+G+ EL+AG Sbjct: 190 AGMAARNAVDAAELAATGMSGRLDILEGQMGFYELFAG 227 >gb|AEM42806.1| MmgE/PrpD family protein [Ketogulonigenium vulgarum WSH-001] Length = 448 Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 95/211 (45%), Positives = 134/211 (63%), Gaps = 1/211 (0%) Query: 20 ITDVVGCLLGGRDDVAVVNAGRFLRAAESAGRAGVITQQATVGAPWAALVNGCAAHALDF 79 ITD + C++ GR D A + R + + A A ++ A AAL+NG AAHALDF Sbjct: 30 ITDTLACIVAGRADSATLAVRRAMESQIGASGARIVGGGRAAPAV-AALINGTAAHALDF 88 Query: 80 DDNFFPPVTHASASLVPALFALAEETGADAAAIVHAYIVGLEVEAQIGKRMNPSHYASGW 139 DDNF P ++HASA +VPAL A+A+ A V AY++ L+ +A +G + +HY +GW Sbjct: 89 DDNFRPGMSHASAVIVPALLAIADLVDASGEDFVKAYLIALQAQAYVGWGVGYNHYVAGW 148 Query: 140 HATSTIGAIGVAAACAVLLRLSEKGVLHAISIGSSLAGGSKRQFGSMVKPMHAGFAAMHG 199 H TSTIG++G AA A LL L G+ A+++G S+A G K QFG+ KP HAG AA + Sbjct: 149 HGTSTIGSVGTAAGTAWLLGLDTDGIARALTLGVSMASGVKGQFGTSAKPFHAGMAARNA 208 Query: 200 VLAARLAASGITGVEEMLQGKWSLSELYAGG 230 V AA LA +G++G ++L+G+ L ELY+GG Sbjct: 209 VEAALLAQAGLSGKMDILEGEQGLRELYSGG 239