BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0285.p (373 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004152369.1| fatty acid hydroxylase [Variovorax paradoxus... 437 e-120 ref|YP_004490610.1| YhhN family protein [Delftia sp. Cs1-4] >gi|... 390 e-106 ref|YP_001562261.1| YhhN family protein [Delftia acidovorans SPH... 389 e-106 ref|YP_004157547.1| yhhn family protein [Variovorax paradoxus EP... 385 e-105 emb|CBA31712.1| hypothetical protein Csp_D28490 [Curvibacter put... 382 e-104 >ref|YP_004152369.1| fatty acid hydroxylase [Variovorax paradoxus EPS] gb|ADU34258.1| fatty acid hydroxylase [Variovorax paradoxus EPS] Length = 375 Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust. Identities = 211/356 (59%), Positives = 262/356 (73%), Gaps = 2/356 (0%) Query: 1 MEQLVVYIIPLFLVLICAELAYGYFRGRNTFRLNDAISSLSQGLIGQLVGLVTQLFQIGF 60 M +LVV ++P+F +L+ E A+G+F+ RNT+R +D + SLSQGL+ Q + + TQLFQIG Sbjct: 1 MHRLVVLVVPVFALLMACEFAWGWFKRRNTYRFSDTLGSLSQGLLSQALAVCTQLFQIGL 60 Query: 61 YTFAYRFVAIAPHARFWHGAAGWIAAILLFDFFDYWLHRMGHENAVMWAAHAVHHQSQDF 120 Y Y VAI FW+ A GWI A+LLFDF DYWLHR GHE+AV WAAH+VHHQSQ F Sbjct: 61 YAMVYPLVAIWTRPAFWNSAIGWIVAVLLFDFCDYWLHRAGHESAVFWAAHSVHHQSQQF 120 Query: 121 NLSTALRQESTVVFIGWLFYLPMAVLGVPPEQFAIAGLIVLVYQFWIHTEHVGKLGWFDK 180 N STALRQES V F+GW FYLPMAV+GVPPEQF IAGLIVLVYQFWIHTEH+GKLGWFD+ Sbjct: 121 NFSTALRQESMVAFLGWAFYLPMAVVGVPPEQFGIAGLIVLVYQFWIHTEHIGKLGWFDR 180 Query: 181 IFSSPSNHRVHHAVNDQYLDKNYGGMLVIWDRLFGTFAEEKEACVYGTRTPLKSWDPLWA 240 +FSSPSNHRVHHAVND Y+D+NYGGMLV+WDR+FGTFAEE E VYGTR L S+DP+ A Sbjct: 181 VFSSPSNHRVHHAVNDGYVDRNYGGMLVVWDRMFGTFAEENERAVYGTRKALASFDPVRA 240 Query: 241 VTSGYWQLAQTAARLPRWQDKLKLWFKPPGWLPAGVTASGPE--FSLEAARDRYDPKLSR 298 + Y L + + RW+DKL +WFKPPGW PA V A PE FSL+ A +DP L+R Sbjct: 241 ILGPYVPLVRDSWHTRRWRDKLAVWFKPPGWRPADVAARFPEAPFSLDEAMHIHDPALTR 300 Query: 299 GASVAAVLQFGLLLAASVACMWVADDLSYARLVELCGVLLAAFWGLGAFMQHRIGM 354 V+A + F + ++A +W ADDL + +EL + +A FW +GA + RI + Sbjct: 301 VQVVSASIHFIGWIGVTLAFLWGADDLVFRTGLELLALAIAGFWTIGAVLDSRIRL 356 >ref|YP_004490610.1| YhhN family protein [Delftia sp. Cs1-4] gb|AEF92255.1| YhhN family protein [Delftia sp. Cs1-4] Length = 624 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 201/364 (55%), Positives = 245/364 (67%), Gaps = 4/364 (1%) Query: 2 EQLVVYIIPLFLVLICAELAYGYFRGRNTFRLNDAISSLSQGLIGQLVGLVTQLFQIGFY 61 Q++V+ P FL+LI E +RGRN +RL DA+SS+S G++ Q + TQL +IG Y Sbjct: 5 SQIIVFATPAFLLLIALEWGVSLWRGRNAYRLADAVSSISLGMLSQTSAVFTQLLRIGLY 64 Query: 62 TFAYRFVAIAPHARFWHGAAGWIAAILLFDFFDYWLHRMGHENAVMWAAHAVHHQSQDFN 121 T A+ VA+ + FW GW+ A+LL+DF YWLHRMGHE AV+WAAHAVHHQSQD+N Sbjct: 65 TLAFDHVALWRNDAFWTSIPGWLLALLLYDFCYYWLHRMGHEVAVLWAAHAVHHQSQDYN 124 Query: 122 LSTALRQESTVVFIGWLFYLPMAVLGVPPEQFAIAGLIVLVYQFWIHTEHVGKLGWFDKI 181 LSTALRQ S+ +GWLFYLPMA+ GVPP FAI GLI L+YQFW+HTE V +LGWFD+ Sbjct: 125 LSTALRQTSSGALLGWLFYLPMALAGVPPLVFAIVGLIDLLYQFWVHTEQVRRLGWFDRW 184 Query: 182 FSSPSNHRVHHAVNDQYLDKNYGGMLVIWDRLFGTFAEE--KEACVYGTRTPLKSWDPLW 239 F +PSNHRVHHAVND YLD+NYGG+L++WDR+FGTF E E CVYGTR L+SWDPLW Sbjct: 185 FCAPSNHRVHHAVNDCYLDRNYGGILIVWDRMFGTFKPEDDSEPCVYGTRGLLQSWDPLW 244 Query: 240 AVTSGYWQLAQTAARLPRWQDKLKLWFKPPGWLPAGVTAS--GPEFSLEAARDRYDPKLS 297 A Y QL + RW DKL++W KPPGW PA V P F L+A R Y P + Sbjct: 245 ANAVVYRQLIHDSWHARRWSDKLRVWLKPPGWRPADVAQRFPRPAFDLDAHRVLYAPGME 304 Query: 298 RGASVAAVLQFGLLLAASVACMWVADDLSYARLVELCGVLLAAFWGLGAFMQHRIGMVAM 357 RG A LQF L+A +W AD S AR VLLA W LGA MQ RI + Sbjct: 305 RGLRWFAGLQFVALIAGVSLFLWHADQSSTARNALWFAVLLACQWALGAAMQGRISLWLA 364 Query: 358 VAID 361 +AI+ Sbjct: 365 LAIE 368 >ref|YP_001562261.1| YhhN family protein [Delftia acidovorans SPH-1] gb|ABX33876.1| YhhN family protein [Delftia acidovorans SPH-1] Length = 626 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 202/364 (55%), Positives = 245/364 (67%), Gaps = 4/364 (1%) Query: 2 EQLVVYIIPLFLVLICAELAYGYFRGRNTFRLNDAISSLSQGLIGQLVGLVTQLFQIGFY 61 Q++V+ P FL+LI E +RGRN +RL DA+SS+S G++ Q + TQL +IG Y Sbjct: 5 SQIIVFATPAFLLLIALEWGVSLWRGRNAYRLADAVSSISLGMLSQTSAVFTQLLRIGLY 64 Query: 62 TFAYRFVAIAPHARFWHGAAGWIAAILLFDFFDYWLHRMGHENAVMWAAHAVHHQSQDFN 121 T A+ VA+ + FW GW+ A+LL+DF YWLHRMGHE AV+WAAHAVHHQSQD+N Sbjct: 65 TLAFDHVALWRNDAFWTSIPGWLLALLLYDFCYYWLHRMGHEVAVLWAAHAVHHQSQDYN 124 Query: 122 LSTALRQESTVVFIGWLFYLPMAVLGVPPEQFAIAGLIVLVYQFWIHTEHVGKLGWFDKI 181 LSTALRQ S+ +GWLFYLPMA+ GVPP FAI GLI L+YQFW+HTE V +LGWFD+ Sbjct: 125 LSTALRQTSSGALLGWLFYLPMALAGVPPLVFAIVGLIDLLYQFWVHTEQVRRLGWFDRW 184 Query: 182 FSSPSNHRVHHAVNDQYLDKNYGGMLVIWDRLFGTFAEE--KEACVYGTRTPLKSWDPLW 239 F +PSNHRVHHAVND YLD+NYGG+L++WDRLFGTF E E CVYGTR L+SWDPLW Sbjct: 185 FCAPSNHRVHHAVNDCYLDRNYGGILIVWDRLFGTFKPEDDSEPCVYGTRGLLQSWDPLW 244 Query: 240 AVTSGYWQLAQTAARLPRWQDKLKLWFKPPGWLPAGVTAS--GPEFSLEAARDRYDPKLS 297 A Y QL + R DKL++W KPPGW PA V P F L+A R Y P + Sbjct: 245 ANAVVYRQLIHDSWHARRCGDKLRVWLKPPGWRPADVAQRFPRPAFDLDAHRVLYAPGME 304 Query: 298 RGASVAAVLQFGLLLAASVACMWVADDLSYARLVELCGVLLAAFWGLGAFMQHRIGMVAM 357 RG A LQF L+A +W AD S AR GVLLA W LGA MQ RI + Sbjct: 305 RGLRWFAGLQFVALIAGVSLFLWHADQSSTARNALWFGVLLACQWALGAAMQGRISLWVA 364 Query: 358 VAID 361 +AI+ Sbjct: 365 LAIE 368 >ref|YP_004157547.1| yhhn family protein [Variovorax paradoxus EPS] gb|ADU39436.1| YhhN family protein [Variovorax paradoxus EPS] Length = 581 Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust. Identities = 188/368 (51%), Positives = 247/368 (67%), Gaps = 9/368 (2%) Query: 3 QLVVYIIPLFLVLICAELAYGYFRGR-----NTFRLNDAISSLSQGLIGQLVGLVTQLFQ 57 Q++V P+F +LI E A G R R +T+RL DA++S+ G++ Q+ ++T L + Sbjct: 5 QIIVLATPVFFLLIAIEFAVGRARARRGTGHDTYRLADAVNSIGLGMLSQISAVLTGLLR 64 Query: 58 IGFYTFAYRFVAIAPH---ARFWHGAAGWIAAILLFDFFDYWLHRMGHENAVMWAAHAVH 114 IG YT Y VA+ P + FW GW+ A++ +DF YWLHRMGHE+AV+WAAH VH Sbjct: 65 IGIYTAVYSAVALFPKEAASEFWTTWYGWLLALVFYDFCYYWLHRMGHESAVLWAAHVVH 124 Query: 115 HQSQDFNLSTALRQESTVVFIGWLFYLPMAVLGVPPEQFAIAGLIVLVYQFWIHTEHVGK 174 HQSQ +NLSTALRQ S+ +GW+FYLPMAV GVPP F + LI L+YQFW+HTE VGK Sbjct: 125 HQSQHYNLSTALRQTSSGALLGWIFYLPMAVAGVPPLVFVVVALIDLLYQFWVHTEQVGK 184 Query: 175 LGWFDKIFSSPSNHRVHHAVNDQYLDKNYGGMLVIWDRLFGTFAEEKEACVYGTRTPLKS 234 LGWFD+ F SPSNHRVHHAVND YLD+NYGG+L++WDR+FGTF EE E CVYGTR LKS Sbjct: 185 LGWFDRWFCSPSNHRVHHAVNDTYLDRNYGGILIVWDRMFGTFREENERCVYGTRGELKS 244 Query: 235 WDPLWAVTSGYWQLAQTAARLPRWQDKLKLWFKPPGWLPAGVTASGPEFSLEAAR-DRYD 293 WDPLWA YW LA+ + W DKL++WFKPPGW PA V A P+ + + A+ RY+ Sbjct: 245 WDPLWANAEVYWTLAKDSWHARSWADKLRVWFKPPGWRPADVAARFPKPAFDIAKVTRYE 304 Query: 294 PKLSRGASVAAVLQFGLLLAASVACMWVADDLSYARLVELCGVLLAAFWGLGAFMQHRIG 353 P +SRG A +QF L+L +W +D + R L A+ W +GA +Q RI Sbjct: 305 PVVSRGVQWFAGVQFLLMLGGVAFFLWFSDGMPLQRSAVWLAALTASLWAIGAVLQGRIS 364 Query: 354 MVAMVAID 361 + ++ ++ Sbjct: 365 VTEVLLVE 372 >emb|CBA31712.1| hypothetical protein Csp_D28490 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 574 Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust. Identities = 186/371 (50%), Positives = 248/371 (66%), Gaps = 8/371 (2%) Query: 1 MEQLVVYIIPLFLVLICAELAY-----GYFRGRNTFRLNDAISSLSQGLIGQLVGLVTQL 55 M +++V+ P+F +LI E A+ G +RLNDAI+S+S G++ Q+ G++T++ Sbjct: 1 MSKIIVFATPVFFLLIALEFAWSRRANARVPGNRAYRLNDAINSISLGILSQVAGVLTKV 60 Query: 56 FQIGFYTFAYRFVAIAPHARFWHGAAGWIAAILLFDFFDYWLHRMGHENAVMWAAHAVHH 115 +G Y ++ VA+ P FW G + A++ +DF YWLHR GH A+ WAAH VHH Sbjct: 61 LTVGIYAAVFKAVALYPDLAFWSTWYGVVLALVFYDFCYYWLHRAGHVVALFWAAHVVHH 120 Query: 116 QSQDFNLSTALRQESTVVFIGWLFYLPMAVLGVPPEQFAIAGLIVLVYQFWIHTEHVGKL 175 QSQ +NLSTALRQ S+ F GW+FYLPMA+ GVPP F I LI L+YQFW+HTE VGKL Sbjct: 121 QSQHYNLSTALRQTSSGAFFGWVFYLPMAIAGVPPLVFGIVALIDLLYQFWVHTEQVGKL 180 Query: 176 GWFDKIFSSPSNHRVHHAVNDQYLDKNYGGMLVIWDRLFGTFAEEKEACVYGTRTPLKSW 235 GWFD++F SPSNHRVHHAVND Y+DKNYGG+L++WDR+FGTF +E E CVYGTR L SW Sbjct: 181 GWFDRVFCSPSNHRVHHAVNDPYIDKNYGGILMVWDRMFGTFRDEDEPCVYGTRGALNSW 240 Query: 236 DPLWAVTSGYWQLAQTAARLPRWQDKLKLWFKPPGWLPAGVTASGPE--FSLEAARDRYD 293 DP+WA YW LA+ + RW DKL++WF PPGW PA + A+ P+ F LE + ++ Sbjct: 241 DPVWANAEVYWGLAKDSWATRRWMDKLRVWFMPPGWQPADLAAAHPKPPFRLEQVQT-FN 299 Query: 294 PKLSRGASVAAVLQFGLLLAASVACMWVADDLSYARLVELCGVLLAAFWGLGAFMQHRIG 353 P L+ A LQF LL A A +WVAD LS+ L A+ W +G FMQH +G Sbjct: 300 PPLTTTQQWFAGLQFLGLLGAVAAFLWVADSLSFTNAALYAAGLFASVWAVGRFMQHGLG 359 Query: 354 MVAMVAIDVVA 364 M+ ++A++ A Sbjct: 360 MLEVLAVEAAA 370