BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0260.p (363 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_02886244.1| extracellular solute-binding protein family 5... 451 e-124 ref|YP_004417130.1| peptide/opine/nickel ABC transporter peripla... 451 e-124 ref|YP_003609279.1| extracellular solute-binding protein family ... 446 e-123 ref|YP_555436.1| peptide/opine/nickel ABC transporter periplasmi... 436 e-120 ref|ZP_03267624.1| extracellular solute-binding protein family 5... 429 e-118 >ref|ZP_02886244.1| extracellular solute-binding protein family 5 [Burkholderia graminis C4D1M] gb|EDT08128.1| extracellular solute-binding protein family 5 [Burkholderia graminis C4D1M] Length = 529 Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust. Identities = 225/308 (73%), Positives = 253/308 (82%), Gaps = 5/308 (1%) Query: 9 KTRTRKRVGKIVAALAAGVLAALAGTGQAGA-AEPKHGGTLNWIVTPEPSSILPLTTTAG 67 K R R ++VA LA+ A G AGA A P HGGTL W+VTPEP+SI+PLTTTAG Sbjct: 2 KPTHRARAIRLVALLAS----AFIGIVPAGASAAPDHGGTLTWLVTPEPASIVPLTTTAG 57 Query: 68 GNTELGPKIVEGLLTYDFNLNPKPLLATSWSISKDGLQYRFNLRHGVKWHDGKDFTSADV 127 GN E+GPK+VEGLLTYD NLNPKPLLATSW +S DGLQYRFNLR GVKWHDGK FTSADV Sbjct: 58 GNAEIGPKVVEGLLTYDRNLNPKPLLATSWVVSTDGLQYRFNLRRGVKWHDGKPFTSADV 117 Query: 128 AFSILTLKVVHPRGRATFANVTEVQTPDPFTAVIVLSKPSPTLLTALAGAESPIVPRHLY 187 AFSILTLK VHPRGR+TFANVT+V+TPDP+TAVI LS+P+P LLTALAG ESPI+PRHLY Sbjct: 118 AFSILTLKQVHPRGRSTFANVTDVKTPDPYTAVIELSRPAPFLLTALAGTESPIIPRHLY 177 Query: 188 DKTDILNSKYNSAPVGTGPFIFKEFVKGSHIVLERNPNYWDKPKPYLDKVVVRFIPDALA 247 + TDI S YNSAPVGTGPF+FK FV GS+IVLERNP+YWDKPKPY+D++VVRF+PD A Sbjct: 178 EGTDIAASPYNSAPVGTGPFVFKSFVHGSNIVLERNPDYWDKPKPYVDRIVVRFLPDGAA 237 Query: 248 RATALESGAADLGGQAIPLSDVGRFSKLPKITVDTTNWAYIGLQQQLYFNLDTPVLQKIE 307 RA ALESGAA+LG QAIPLSDV RFS L VDTTNWAY QQL FNLDTPVL+ Sbjct: 238 RAAALESGAANLGDQAIPLSDVKRFSALSNFNVDTTNWAYNSNHQQLIFNLDTPVLKDKA 297 Query: 308 VRRAISXS 315 VR+AIS + Sbjct: 298 VRKAISQA 305 >ref|YP_004417130.1| peptide/opine/nickel ABC transporter periplasmic ligand-binding protein [Pusillimonas sp. T7-7] gb|AEC20506.1| peptide/opine/nickel ABC transporter periplasmic ligand-binding protein [Pusillimonas sp. T7-7] Length = 541 Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust. Identities = 218/307 (71%), Positives = 258/307 (84%), Gaps = 4/307 (1%) Query: 13 RKRVGKIVAALAAGV----LAALAGTGQAGAAEPKHGGTLNWIVTPEPSSILPLTTTAGG 68 R++ G V A++ G+ A AGA++P HGGTLNWIVTPEP+S +PLTTTAG Sbjct: 11 RRKFGLAVMAISLGMSGLLAGGAARAASAGASQPVHGGTLNWIVTPEPASFIPLTTTAGT 70 Query: 69 NTELGPKIVEGLLTYDFNLNPKPLLATSWSISKDGLQYRFNLRHGVKWHDGKDFTSADVA 128 N ELGPK+VEGLLTYD +LNP PLLAT W IS+DGL+Y F LR GVKWHDGKDFTSADVA Sbjct: 71 NAELGPKVVEGLLTYDNDLNPLPLLATEWKISEDGLRYTFTLRKGVKWHDGKDFTSADVA 130 Query: 129 FSILTLKVVHPRGRATFANVTEVQTPDPFTAVIVLSKPSPTLLTALAGAESPIVPRHLYD 188 FSILTLK VHPRGRA F+NVTEVQTPD TA++VLSKP+P LLTALAGAESPIVP+HLY+ Sbjct: 131 FSILTLKQVHPRGRAIFSNVTEVQTPDAHTAIVVLSKPAPYLLTALAGAESPIVPKHLYE 190 Query: 189 KTDILNSKYNSAPVGTGPFIFKEFVKGSHIVLERNPNYWDKPKPYLDKVVVRFIPDALAR 248 TDI+ +KYNS+PVGTGPF+FKE+VKGSHIVLERNPNYW++P+PYLDK++VRFIPDA+AR Sbjct: 191 GTDIVANKYNSSPVGTGPFVFKEWVKGSHIVLERNPNYWNQPRPYLDKIIVRFIPDAVAR 250 Query: 249 ATALESGAADLGGQAIPLSDVGRFSKLPKITVDTTNWAYIGLQQQLYFNLDTPVLQKIEV 308 + ALESG+ADL GQAIPLSDV RFS +P + VDT NW YI + QQL+FNLDTP LQ +V Sbjct: 251 SAALESGSADLAGQAIPLSDVKRFSDMPHLRVDTINWPYISVHQQLFFNLDTPALQDKKV 310 Query: 309 RRAISXS 315 R+AI+ + Sbjct: 311 RQAIAQA 317 >ref|YP_003609279.1| extracellular solute-binding protein family 5 [Burkholderia sp. CCGE1002] gb|ADG19768.1| extracellular solute-binding protein family 5 [Burkholderia sp. CCGE1002] Length = 529 Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust. Identities = 218/293 (74%), Positives = 252/293 (86%), Gaps = 8/293 (2%) Query: 23 LAAGVLAALAGTGQAGAAEPKHGGTLNWIVTPEPSSILPLTTTAGGNTELGPKIVEGLLT 82 + AG+LAA AEP HGGTL W+VTPEP+SI+PLTTTAGGN E+GPK+VEGLLT Sbjct: 21 MCAGMLAA--------QAEPNHGGTLTWLVTPEPASIVPLTTTAGGNAEIGPKVVEGLLT 72 Query: 83 YDFNLNPKPLLATSWSISKDGLQYRFNLRHGVKWHDGKDFTSADVAFSILTLKVVHPRGR 142 YD NLNP+PLLAT+WS+SKDGL+YRF LR GVKWHDGK FTSADVAFSILTLK VHPRGR Sbjct: 73 YDKNLNPQPLLATAWSVSKDGLEYRFTLRRGVKWHDGKPFTSADVAFSILTLKQVHPRGR 132 Query: 143 ATFANVTEVQTPDPFTAVIVLSKPSPTLLTALAGAESPIVPRHLYDKTDILNSKYNSAPV 202 +TFANVT+V+TPDP+TAVI LSKP+P LLTALAG ESPI+P+HLYD TDI++S YNSAPV Sbjct: 133 STFANVTDVKTPDPYTAVIELSKPAPFLLTALAGTESPIIPKHLYDGTDIVSSPYNSAPV 192 Query: 203 GTGPFIFKEFVKGSHIVLERNPNYWDKPKPYLDKVVVRFIPDALARATALESGAADLGGQ 262 GTGPFI+K FV GS+I+LERNP+YWDKPKPY+DK++VRF+PDA ARA ALESGAA+LG Q Sbjct: 193 GTGPFIYKSFVHGSYILLERNPDYWDKPKPYIDKILVRFLPDAAARAAALESGAANLGDQ 252 Query: 263 AIPLSDVGRFSKLPKITVDTTNWAYIGLQQQLYFNLDTPVLQKIEVRRAISXS 315 AIPLSDV RF+ LP TVDTTNW Y+ QQL FNLDTPVL+ VR+AIS + Sbjct: 253 AIPLSDVKRFTTLPNFTVDTTNWPYVSNHQQLIFNLDTPVLKDRAVRKAISQA 305 >ref|YP_555436.1| peptide/opine/nickel ABC transporter periplasmic ligand-binding protein [Burkholderia xenovorans LB400] gb|ABE36086.1| ABC peptide/opine/nickel family transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] Length = 529 Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust. Identities = 212/299 (70%), Positives = 253/299 (84%), Gaps = 2/299 (0%) Query: 17 GKIVAALAAGVLAALAGTGQAGAAEPKHGGTLNWIVTPEPSSILPLTTTAGGNTELGPKI 76 G + AL+A +L + + A P HGGTL W+VTPEP+SI+PLT+TAGGN E+GPK+ Sbjct: 9 GYVFGALSAFIL--ICASSLPVLAAPNHGGTLTWLVTPEPASIIPLTSTAGGNAEIGPKV 66 Query: 77 VEGLLTYDFNLNPKPLLATSWSISKDGLQYRFNLRHGVKWHDGKDFTSADVAFSILTLKV 136 VEGLLTYD +LNP+PLLAT+WS+SKDGL+YRF LR GVKWHDGK FTSADVAFSILTLK Sbjct: 67 VEGLLTYDKDLNPQPLLATAWSVSKDGLEYRFTLRRGVKWHDGKPFTSADVAFSILTLKQ 126 Query: 137 VHPRGRATFANVTEVQTPDPFTAVIVLSKPSPTLLTALAGAESPIVPRHLYDKTDILNSK 196 VHPRGR+TFANV +V+TPDP+TA I LSKP+P LLTAL+G+ESPI+P+HLY+ TDI+++ Sbjct: 127 VHPRGRSTFANVVDVRTPDPYTATIQLSKPAPFLLTALSGSESPIIPKHLYEGTDIVSNP 186 Query: 197 YNSAPVGTGPFIFKEFVKGSHIVLERNPNYWDKPKPYLDKVVVRFIPDALARATALESGA 256 YNSAPVGTGPF+FK FV GS+I+LERNP+YWDKPKPYLDK+VVRF+PDA ARA ALESGA Sbjct: 187 YNSAPVGTGPFVFKSFVHGSYILLERNPDYWDKPKPYLDKIVVRFLPDAAARAAALESGA 246 Query: 257 ADLGGQAIPLSDVGRFSKLPKITVDTTNWAYIGLQQQLYFNLDTPVLQKIEVRRAISXS 315 A+LG QAIPLSDV RFS LP+ VDTTNW Y+ QQL FNLDTPVL+ VR+AIS + Sbjct: 247 ANLGDQAIPLSDVKRFSALPEFKVDTTNWPYVSNHQQLIFNLDTPVLKDKAVRKAISQA 305 >ref|ZP_03267624.1| extracellular solute-binding protein family 5 [Burkholderia sp. H160] gb|EEA00822.1| extracellular solute-binding protein family 5 [Burkholderia sp. H160] Length = 529 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 207/276 (75%), Positives = 240/276 (86%) Query: 40 AEPKHGGTLNWIVTPEPSSILPLTTTAGGNTELGPKIVEGLLTYDFNLNPKPLLATSWSI 99 AEP HGGTL W+V PEP+SI+PLTTTAGGN E+GPK+VEGLLTYD +LNP+PLLAT+WS+ Sbjct: 30 AEPNHGGTLTWLVAPEPASIVPLTTTAGGNAEIGPKVVEGLLTYDKDLNPQPLLATAWSV 89 Query: 100 SKDGLQYRFNLRHGVKWHDGKDFTSADVAFSILTLKVVHPRGRATFANVTEVQTPDPFTA 159 SKDGL+YRF LR GVKWHDGK FTSADVAFSILTLK VHPRGR+TFANVT+V+TPDP+TA Sbjct: 90 SKDGLEYRFTLRRGVKWHDGKPFTSADVAFSILTLKQVHPRGRSTFANVTDVKTPDPYTA 149 Query: 160 VIVLSKPSPTLLTALAGAESPIVPRHLYDKTDILNSKYNSAPVGTGPFIFKEFVKGSHIV 219 VI LSKP+P LLTALAG ESPI+P+HLY+ TDI+ + YNSAPVGTGPFI+K FV GS+I+ Sbjct: 150 VIELSKPAPFLLTALAGTESPIIPKHLYEGTDIVANPYNSAPVGTGPFIYKTFVHGSYIL 209 Query: 220 LERNPNYWDKPKPYLDKVVVRFIPDALARATALESGAADLGGQAIPLSDVGRFSKLPKIT 279 LERNP+YWDKPKPY+DK++VRF+PDA ARA ALESGAA+L QAIPLSDV RF+ LP Sbjct: 210 LERNPDYWDKPKPYIDKIIVRFLPDAAARAAALESGAANLADQAIPLSDVKRFTTLPNFK 269 Query: 280 VDTTNWAYIGLQQQLYFNLDTPVLQKIEVRRAISXS 315 VDTTNW Y QQL FNLDTPVL+ VR+AIS + Sbjct: 270 VDTTNWPYNSNHQQLIFNLDTPVLKDKAVRKAISQA 305