BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0254.p (312 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777347.1| sugar phosphate isomerase [Herbaspirillum se... 440 e-121 ref|YP_004751127.1| Arabinose 5-phosphate isomerase [Collimonas ... 400 e-109 ref|YP_001101334.1| D-arabinose 5-phosphate isomerase [Herminiim... 377 e-102 ref|ZP_08274226.1| Arabinose 5-phosphate isomerase [Oxalobactera... 353 2e-95 ref|YP_001355037.1| polysialic acid capsule expression protein [... 353 2e-95 >ref|YP_003777347.1| sugar phosphate isomerase [Herbaspirillum seropedicae SmR1] emb|CAM32654.1| Sugar phosphate isomerase (involved in capsule formation) protein [Herbaspirillum seropedicae] gb|ADJ65439.1| sugar phosphate isomerase (involved in capsule formation) protein [Herbaspirillum seropedicae SmR1] Length = 342 Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust. Identities = 218/256 (85%), Positives = 236/256 (92%) Query: 1 MSVTEAKILPKSFSAERAQRALELARQTLQIEADAILALKSRMSDADAEPLARAVGILLE 60 MSVT+ K P SFSA A+RA+ELARQTLQIEADAILALK+R+ D +EPLA+AV +LL+ Sbjct: 1 MSVTDDKTTPASFSAGAARRAIELARQTLQIEADAILALKNRLGDDASEPLAQAVHLLLQ 60 Query: 61 CKGRVVVSGIGKSGHIGRKIAATFASTGTPALFMHPAEAAHGDLGMVTPGDVFIAISNSG 120 C GR VVSGIGKSGHIGRKIAAT ASTGTP+LFMHPAEAAHGDLGMVTP DVFIAISNSG Sbjct: 61 CNGRAVVSGIGKSGHIGRKIAATLASTGTPSLFMHPAEAAHGDLGMVTPNDVFIAISNSG 120 Query: 121 ETAELMAIVPIIKRMGAYLIAMTGNDDSSLARLSAIHLNVGVAKEACTLNLAPTASTTAT 180 ET ELMAI+PI+KRMGA +IAMTGND+SSLAR++ +HLNVGV KEACTLNLAPTASTTAT Sbjct: 121 ETGELMAIMPIVKRMGAVIIAMTGNDNSSLARMANVHLNVGVDKEACTLNLAPTASTTAT 180 Query: 181 LAMGDALAVSLLDARGFLEEDFARSHPGGALGRRLLTHVRDVMRTGDAIPAVKPDVSLSA 240 LAMGDALAVSLLDARGFLEEDFARSHPGGALGRRLLTHVRDVMR+GDAIPAV PDVSLS Sbjct: 181 LAMGDALAVSLLDARGFLEEDFARSHPGGALGRRLLTHVRDVMRSGDAIPAVSPDVSLSQ 240 Query: 241 ALMEITRKGMAMTAVV 256 ALMEITRKGMAMTAVV Sbjct: 241 ALMEITRKGMAMTAVV 256 >ref|YP_004751127.1| Arabinose 5-phosphate isomerase [Collimonas fungivorans Ter331] gb|AEK60304.1| Arabinose 5-phosphate isomerase [Collimonas fungivorans Ter331] Length = 343 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 203/257 (78%), Positives = 228/257 (88%), Gaps = 1/257 (0%) Query: 1 MSVTEAKILPKSF-SAERAQRALELARQTLQIEADAILALKSRMSDADAEPLARAVGILL 59 MS+T+ KILP++ + A RAL+LAR TLQIEADAI+ALK+R+SDA +P A+A+ +LL Sbjct: 1 MSLTDTKILPRNLPQSFDAGRALKLARSTLQIEADAIIALKNRISDALDDPFAQAIALLL 60 Query: 60 ECKGRVVVSGIGKSGHIGRKIAATFASTGTPALFMHPAEAAHGDLGMVTPGDVFIAISNS 119 C+GRVVVSGIGKSGHI RKIAAT ASTGTPALF+HPAEAAHGDLGMVT D FIAISNS Sbjct: 61 NCRGRVVVSGIGKSGHIARKIAATLASTGTPALFIHPAEAAHGDLGMVTEDDAFIAISNS 120 Query: 120 GETAELMAIVPIIKRMGAYLIAMTGNDDSSLARLSAIHLNVGVAKEACTLNLAPTASTTA 179 GETAELMAIVPIIKRMGA LIAMTGN DS+LA+L+ +HL+V V +EAC LNLAPTASTTA Sbjct: 121 GETAELMAIVPIIKRMGASLIAMTGNQDSALAQLANVHLDVKVDQEACPLNLAPTASTTA 180 Query: 180 TLAMGDALAVSLLDARGFLEEDFARSHPGGALGRRLLTHVRDVMRTGDAIPAVKPDVSLS 239 TLAMGDALAV+LLDARGF EEDFARSHPGGALGRRLLTHVRDVMR G+AIPAV DVSLS Sbjct: 181 TLAMGDALAVALLDARGFREEDFARSHPGGALGRRLLTHVRDVMRGGEAIPAVTADVSLS 240 Query: 240 AALMEITRKGMAMTAVV 256 AL+EITRKG+AMTAVV Sbjct: 241 TALLEITRKGIAMTAVV 257 >ref|YP_001101334.1| D-arabinose 5-phosphate isomerase [Herminiimonas arsenicoxydans] emb|CAL63213.1| Arabinose 5-phosphate isomerase [Herminiimonas arsenicoxydans] Length = 342 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 192/256 (75%), Positives = 213/256 (83%) Query: 1 MSVTEAKILPKSFSAERAQRALELARQTLQIEADAILALKSRMSDADAEPLARAVGILLE 60 MSV AK P +F A+ A RAL+ AR TLQIEADAILALK R+S+ E +AV +LL Sbjct: 1 MSVPHAKKPPATFDAKSATRALQFARDTLQIEADAILALKQRISNESGEQFIQAVALLLN 60 Query: 61 CKGRVVVSGIGKSGHIGRKIAATFASTGTPALFMHPAEAAHGDLGMVTPGDVFIAISNSG 120 C GRVVVSGIGKSGHI RKIA+T ASTGTPALF+H AEA+HGDLGM+T D IAIS SG Sbjct: 61 CTGRVVVSGIGKSGHIARKIASTLASTGTPALFVHAAEASHGDLGMITADDALIAISYSG 120 Query: 121 ETAELMAIVPIIKRMGAYLIAMTGNDDSSLARLSAIHLNVGVAKEACTLNLAPTASTTAT 180 E EL+AIVPIIKRMGA LI +TGNDDS+LA+L+ +HLNV V KEAC LNLAPTASTTAT Sbjct: 121 EAGELVAIVPIIKRMGATLITITGNDDSTLAQLADVHLNVRVDKEACPLNLAPTASTTAT 180 Query: 181 LAMGDALAVSLLDARGFLEEDFARSHPGGALGRRLLTHVRDVMRTGDAIPAVKPDVSLSA 240 LA+GDALAV+LLDARGF EEDFARSHPGGALGRRLLTHVRDVMRTGDAIP V D SL Sbjct: 181 LAIGDALAVALLDARGFGEEDFARSHPGGALGRRLLTHVRDVMRTGDAIPTVGKDASLYT 240 Query: 241 ALMEITRKGMAMTAVV 256 AL+EI+RKGMAMTAVV Sbjct: 241 ALLEISRKGMAMTAVV 256 >ref|ZP_08274226.1| Arabinose 5-phosphate isomerase [Oxalobacteraceae bacterium IMCC9480] gb|EGF32294.1| Arabinose 5-phosphate isomerase [Oxalobacteraceae bacterium IMCC9480] Length = 349 Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 197/257 (76%), Positives = 219/257 (85%), Gaps = 5/257 (1%) Query: 3 VTEAKILPKSFSAERAQRALELARQTLQIEADAILALKSRMSD---ADAEPLARAVGILL 59 V++A I P F+AERA RAL LAR+TLQIEADA+L LK+R+SD +A A+AVG+LL Sbjct: 9 VSDAVIAP--FTAERAARALVLARETLQIEADALLTLKARLSDPAIDNAGCFAKAVGLLL 66 Query: 60 ECKGRVVVSGIGKSGHIGRKIAATFASTGTPALFMHPAEAAHGDLGMVTPGDVFIAISNS 119 +C GRVVVSGIGKSGHI RKIAAT ASTGTP+LF+HPAEAAHGDLGM+ P DVF+AISNS Sbjct: 67 DCTGRVVVSGIGKSGHIARKIAATLASTGTPSLFVHPAEAAHGDLGMIGPQDVFVAISNS 126 Query: 120 GETAELMAIVPIIKRMGAYLIAMTGNDDSSLARLSAIHLNVGVAKEACTLNLAPTASTTA 179 GETAELMAIVP IKRMGA L+ MTGND SSLARL+ +HLNV V KEAC LNLAPT STTA Sbjct: 127 GETAELMAIVPSIKRMGAVLVTMTGNDASSLARLATVHLNVAVDKEACPLNLAPTTSTTA 186 Query: 180 TLAMGDALAVSLLDARGFLEEDFARSHPGGALGRRLLTHVRDVMRTGDAIPAVKPDVSLS 239 LA+GDALAV+LLDARGF EDFARSHPGGALGRRLLTHVRDVMR+G IPAV VSLS Sbjct: 187 ALALGDALAVALLDARGFRAEDFARSHPGGALGRRLLTHVRDVMRSGGEIPAVLATVSLS 246 Query: 240 AALMEITRKGMAMTAVV 256 AL E+TRKGMAMTAVV Sbjct: 247 QALAEMTRKGMAMTAVV 263 >ref|YP_001355037.1| polysialic acid capsule expression protein [Janthinobacterium sp. Marseille] gb|ABR89483.1| polysialic acid capsule expression protein [Janthinobacterium sp. Marseille] Length = 342 Score = 353 bits (905), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 179/256 (69%), Positives = 206/256 (80%) Query: 1 MSVTEAKILPKSFSAERAQRALELARQTLQIEADAILALKSRMSDADAEPLARAVGILLE 60 MSV+ A P +F A+ RAL+ A TLQIEADAILALK R++ ++ +AV +LL Sbjct: 1 MSVSHAPNPPATFDAQSTARALQFACDTLQIEADAILALKERITSKTSQQFIQAVTLLLN 60 Query: 61 CKGRVVVSGIGKSGHIGRKIAATFASTGTPALFMHPAEAAHGDLGMVTPGDVFIAISNSG 120 CKGRVVVSGIGKSGHI RKIA+T ASTGTPA F+H AEA+HGDLGM+T DV I IS SG Sbjct: 61 CKGRVVVSGIGKSGHIARKIASTLASTGTPAFFVHAAEASHGDLGMITADDVLIGISYSG 120 Query: 121 ETAELMAIVPIIKRMGAYLIAMTGNDDSSLARLSAIHLNVGVAKEACTLNLAPTASTTAT 180 E EL+ IVP IKRMGA LI +TGND S+LA + +HLNV + KEAC LNLAPTASTTAT Sbjct: 121 EAGELLGIVPTIKRMGARLITITGNDASNLAVQADVHLNVHIDKEACPLNLAPTASTTAT 180 Query: 181 LAMGDALAVSLLDARGFLEEDFARSHPGGALGRRLLTHVRDVMRTGDAIPAVKPDVSLSA 240 LA+GDALAV+LLDARGF EEDFARSHPGGALGRRLLTHVRDVMRTG+AIP V D +L A Sbjct: 181 LALGDALAVALLDARGFGEEDFARSHPGGALGRRLLTHVRDVMRTGEAIPTVAKDATLYA 240 Query: 241 ALMEITRKGMAMTAVV 256 AL+E ++KGMAMTAVV Sbjct: 241 ALLESSKKGMAMTAVV 256