BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0230.p (358 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003319754.1| NMT1/THI5 like domain-containing protein [Sp... 167 2e-39 ref|ZP_08316735.1| NMT1/THI5-like domain-containing protein [Glu... 139 7e-31 ref|YP_002498238.1| NMT1/THI5 like domain-containing protein [Me... 135 7e-30 ref|YP_486707.1| hypothetical protein RPB_3098 [Rhodopseudomonas... 131 1e-28 ref|YP_001767757.1| NMT1/THI5-like domain-containing protein [Me... 131 2e-28 >ref|YP_003319754.1| NMT1/THI5 like domain-containing protein [Sphaerobacter thermophilus DSM 20745] gb|ACZ38932.1| NMT1/THI5 like domain protein [Sphaerobacter thermophilus DSM 20745] Length = 365 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 103/285 (36%), Positives = 141/285 (49%), Gaps = 5/285 (1%) Query: 73 STTAMQAVLTGQADMVNMGPAAAIIAR--TKGAPLKAVYLNMRHNFQFPVVLDSSPVKTI 130 ST + V +G + P II ++G ++ Y R N V SP++T Sbjct: 79 STDVTKQVASGSGMIGAPSPEPVIIGHQASQGMQIRYFYTLYRRNIYSIAVPADSPIQTA 138 Query: 131 ADFKGKTIGVLSYGSQMVQIFKGMLTEAGVNPDKDVTFVETGSGAQAVTALSKGRVDIWG 190 AD KGK +GV S GS V K +L EAG++P+ D T V G QA A+ KG VD Sbjct: 139 ADLKGKRVGVTSMGSAGVINIKAVLKEAGLDPE-DATVVAIGESGQAAAAVQKGEVDALS 197 Query: 191 TWDSQIATAENMGLKLRRFSSPFAEKLNFGGSYFVRDDMIAKRPQTIEKVLRCVAMGSVT 250 WD+Q A EN G+ LR +P KL S RD+ + K P +V R VA G++ Sbjct: 198 LWDAQYAILENQGIALRYLDTPSLTKLP-SNSLLARDEDLEKDPDLFARVARAVAKGTIF 256 Query: 251 ALANPQGSLKVHWKVFPLTKPSSLDDATAIKQGLHIIQTRGEFLKLEPGV-KWGEIPISA 309 L NP ++++ WK P TKP+ + + A Q HI++ R E L LE GV +WG Sbjct: 257 TLENPDAAVRIVWKRHPDTKPAGMPEEEAFAQAKHILEARSERLWLEEGVTQWGYSDPEV 316 Query: 310 VANMVAFMKANNIIQTSPKLEDLYTNQFIPAINNFDTAKVVAAAK 354 V FM +I EDLYTN+ + IN+FD V A+ Sbjct: 317 YHAFVDFMAEQGLITEPVNSEDLYTNELLDTINDFDADAVREQAR 361 >ref|ZP_08316735.1| NMT1/THI5-like domain-containing protein [Gluconacetobacter sp. SXCC-1] gb|EGG76769.1| NMT1/THI5-like domain-containing protein [Gluconacetobacter sp. SXCC-1] Length = 363 Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 101/332 (30%), Positives = 161/332 (48%), Gaps = 13/332 (3%) Query: 27 AQAREKVTIAIGTDVLDASQVNNTSLPIYTKCWENAGLDVTLQPTN-STTAMQAVLTGQA 85 A + VTIA+GT VL+A T LP W++AG DV ++P S A+Q +++G A Sbjct: 26 AASPRHVTIAVGTAVLNADYPMLT-LPQSLGYWKSAGYDVQVEPVGASQQALQQMVSGNA 84 Query: 86 DMVNMGPAAAIIART-KGAPLKAVYLNMRHNFQFPVVLDSSPVKTIADFKGKTIGVLSYG 144 + + + A T G ++ N ++ V DS P++T D KGKTIGV S Sbjct: 85 QFAQVNASVIVQADTTHGLGVRVAMENAATDWSIAVPADS-PIRTAMDLKGKTIGVFSLA 143 Query: 145 SQMVQIFKGMLTEAGVNPDKDVTFVETGSGAQAVTALSKGRVDIWGTWDSQIATAENMGL 204 + + + L + G+NP DV+ + G GA V AL G+VD W + +A +N+GL Sbjct: 144 TGGILLLNSYLRQNGLNPATDVSLIPLGLGAPPVQALGHGQVDALLYWAAPMAQFDNVGL 203 Query: 205 KLRRFSSP-FAEKLNFGGSYFVRDDMIAKRPQTIEKVLRCVAMGSVTALANPQGSLKVHW 263 KLR + P + +F S V D +A P + + R +AM +V A ANP +L+ W Sbjct: 204 KLRHITPPDWPTYPDF--SLSVMKDTVAADPDMVVAIARGMAMATVFAEANPTCALRWFW 261 Query: 264 KVFPLTKPSSLDDATAIKQGLHIIQ----TRGEFLKLEPGVKWGEIPISAVANMVAFMKA 319 P + ++LDD T ++ GLH + ++ L G WGE + + + Sbjct: 262 HDHPEARGTNLDDETQLRWGLHSLTAELASQHNAFVLNGGQNWGEAQPAGFERLQTLLHD 321 Query: 320 NNIIQTSPKLEDLYTN--QFIPAINNFDTAKV 349 +I + D ++ +N+FD A + Sbjct: 322 AGLIPGTIPATDYMVRIPDYMRRVNDFDAAAI 353 >ref|YP_002498238.1| NMT1/THI5 like domain-containing protein [Methylobacterium nodulans ORS 2060] gb|ACL57935.1| NMT1/THI5 like domain protein [Methylobacterium nodulans ORS 2060] Length = 354 Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 100/308 (32%), Positives = 151/308 (49%), Gaps = 20/308 (6%) Query: 59 WENAGLDVTLQPT-NSTTAMQAVLTGQ--ADMVNMGPAAAIIARTKGAPLKAVYLNMRHN 115 ++ AG V L P ST M+ V T + ++ P A I A +G K Y + N Sbjct: 50 FDKAGFKVELVPLPGSTDCMRTVATRDLPYSLPSIEPLAIIHA--QGVKAKNYYTAYQGN 107 Query: 116 FQFPVVLDSSPVKTIADFKGKTIGVLSYGSQMVQIFKGMLTEAGVNPDKDVTFVETGSGA 175 V ++SP+++ D KGK IGV S S V I + + G++PD+D+T V G Sbjct: 108 IYGIAVPEASPIRSFKDLKGKKIGVTSMASGGVIIARALAANNGMDPDRDITIVVAGEAG 167 Query: 176 QAVTALSKGRVDIWGTWDSQIATAENMGLKLRRFSSPFAEKLNFGGSYFVRDDMIA---- 231 Q L ++D +D+Q A AEN G KLR F E+ N S F + +IA Sbjct: 168 QTAALLRSNQLDALSQFDTQYALAENAGAKLR-----FLEEDNRAISKFPSNGLIALDET 222 Query: 232 ---KRPQTIEKVLRCVAMGSVTALANPQGSLKVHWKVFPLTKPSSLDDATAIKQGLHIIQ 288 R Q I + + A G+V ALANP+ +L++ ++VFP + + D+ AI+ L ++ Sbjct: 223 LKSHRAQAI-ALAQGYAKGTVFALANPEAALRITYEVFPQVRGTGRDETAAIRDDLKTLE 281 Query: 289 TRGEFLKLEPG--VKWGEIPISAVANMVAFMKANNIIQTSPKLEDLYTNQFIPAINNFDT 346 R + +LE G WGE + + F+ +I+T K D+ TN I IN FD Sbjct: 282 ARAKNWRLEAGGVTMWGENSEKNYQDYLDFLLKFGVIKTPVKAADVITNDLIGDINAFDR 341 Query: 347 AKVVAAAK 354 ++V AK Sbjct: 342 EEIVKLAK 349 >ref|YP_486707.1| hypothetical protein RPB_3098 [Rhodopseudomonas palustris HaA2] gb|ABD07796.1| putative exported protein [Rhodopseudomonas palustris HaA2] Length = 364 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 95/298 (31%), Positives = 148/298 (49%), Gaps = 9/298 (3%) Query: 63 GLDVTLQPTNST--TAMQAVLTGQADMVNMGPAAAIIARTKGA-PLKAVYLNMRHNFQFP 119 GLDVTL + +A+Q V G D+ P A++ G ++ Y N Sbjct: 62 GLDVTLIAVGGSNESAIQ-VSAGNGDVGAASPGEALVGIQAGKLDVRYFYSLYYQNIWHV 120 Query: 120 VVLDSSPVKTIADFKGKTIGVLSYGSQMVQIFKGMLTEAGVNPDKDVTFVETGSGAQAVT 179 VL SP+K IAD KGK +GV S GS K + +AG++P DV F+ G GAQAVT Sbjct: 121 AVLPDSPIKAIADLKGKKLGVQSLGSAGTTFGKAFVQQAGLDPQTDVAFLPVGVGAQAVT 180 Query: 180 ALSKGRVDIWGTWDSQIATAENMGLKLRRFSSPFAEKLNFGGSYFVRDDMIAKRPQTIEK 239 ++ + VD WD+ +A + GL LR +P + D IAK+P+ + Sbjct: 181 SVRQKFVDAVVYWDAALAKFKFSGLDLREVPAPEGIRSLPDVGLLATSDTIAKKPKMLIG 240 Query: 240 VLRCVAMGSVTALANPQGSLKVHWKVFPLTKPSSLDDATAIKQGLHIIQTRGEFL---KL 296 V R VA G ++ANP+ ++ + WK +P K + D A A+++G+ + Q R K Sbjct: 241 VSRGVAKGYDYSMANPRAAVLITWKAYPEAKSKNPDPAAALEEGITVNQARLRIWNSPKT 300 Query: 297 EPGVKWGEIPISAVANMVAFMKANNIIQTSPKLEDLYTNQFIPAINNFDTAKVVAAAK 354 E + G + + +V F A ++ + ++ + TNQF+ N++D V+A AK Sbjct: 301 ED--QHGRLIEADWQRLVDFFVAQKVLPGAVPVDRVITNQFVKDANSYDRQAVIADAK 356 >ref|YP_001767757.1| NMT1/THI5-like domain-containing protein [Methylobacterium sp. 4-46] gb|ACA15323.1| NMT1/THI5 like domain protein [Methylobacterium sp. 4-46] Length = 354 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 95/308 (30%), Positives = 152/308 (49%), Gaps = 20/308 (6%) Query: 59 WENAGLDVTLQPT-NSTTAMQAVLTGQ--ADMVNMGPAAAIIARTKGAPLKAVYLNMRHN 115 ++ AG V L P ST M+ V T + ++ P A I T+G K Y + N Sbjct: 50 FDKAGFKVELVPLPGSTDCMRTVATRDLPYSLPSIEPVAII--STQGVKAKNFYTAYQGN 107 Query: 116 FQFPVVLDSSPVKTIADFKGKTIGVLSYGSQMVQIFKGMLTEAGVNPDKDVTFVETGSGA 175 V ++S V++ D KGK IGV S S V I + + G++PD+D+T V G Sbjct: 108 IYGIAVPEASAVRSFKDLKGKKIGVTSMASGGVVIARALAANNGMDPDRDITIVVAGEAG 167 Query: 176 QAVTALSKGRVDIWGTWDSQIATAENMGLKLRRFSSPFAEKLNFGGSYFVRDDMIA---- 231 Q L +VD +D+Q A AEN G KLR F E+ N S F + +IA Sbjct: 168 QTAALLRTNQVDALSQFDTQYALAENAGAKLR-----FLEEDNRAISKFPSNGLIALDET 222 Query: 232 ---KRPQTIEKVLRCVAMGSVTALANPQGSLKVHWKVFPLTKPSSLDDATAIKQGLHIIQ 288 R Q + + + A G+V +ANP+ +L++ ++VFP + + D+ TA+++ + ++ Sbjct: 223 LKSHRAQAV-ALAQGYAKGTVFTIANPEAALRITYEVFPQVRGTGRDETTAMREDIRTLE 281 Query: 289 TRGEFLKLEPG--VKWGEIPISAVANMVAFMKANNIIQTSPKLEDLYTNQFIPAINNFDT 346 R + +L G KWGE + + + F+ +++I+T K D+ TN I IN F Sbjct: 282 ARVKNWQLAAGGVTKWGENSVQNYQDYINFLSKHDVIRTFVKPSDVITNDLIDDINAFSP 341 Query: 347 AKVVAAAK 354 ++ AK Sbjct: 342 QEIENFAK 349