BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0227.p         (145 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_07775206.1| pirin-like protein [Pseudomonas fluorescens W...    92   4e-17
ref|ZP_08506479.1| Putative pirin-related protein [Methyloversat...    91   7e-17
ref|YP_004752392.1| pirin-like protein [Collimonas fungivorans T...    89   2e-16
ref|YP_576099.1| Pirin-like [Nitrobacter hamburgensis X14] >gi|9...    89   2e-16
ref|YP_002873202.1| hypothetical protein PFLU3640 [Pseudomonas f...    89   3e-16

>ref|ZP_07775206.1| pirin-like protein [Pseudomonas fluorescens WH6]
 gb|EFQ62935.1| pirin-like protein [Pseudomonas fluorescens WH6]
          Length = 288

 Score = 91.7 bits (226), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 52/137 (37%), Positives = 72/137 (52%), Gaps = 9/137 (6%)

Query: 1   MKKILGIYSSSRQHRIGDGLLAHTLFSKRMLGRHVSPFLLLDHVGSADSTAPD---ACAR 57
           MKK++GIY+S R H +GDG    TLFS   LG+H+SPFLLLDH G A+ T  D      +
Sbjct: 1   MKKLIGIYTSPRAHWVGDGFPVRTLFSYDNLGKHISPFLLLDHAGPANFTPTDQRRGVGQ 60

Query: 58  QLYRGCNVLTMVQQGRLEYVDADGRKQVLNAGDVQWRSVT------DEHDAASFRAAAAH 111
             +RG   +T+V  G +E+ D+ G    +  GDVQW +        + H AA  R   A 
Sbjct: 61  HPHRGFETVTIVYDGEVEHRDSTGAGGTIGPGDVQWMTAAKGILHEEFHSAAFARKGGAL 120

Query: 112 FXTRRRHPCPAPGKLSR 128
              +     PA  K++ 
Sbjct: 121 EMVQLWVNLPAKDKMAE 137


>ref|ZP_08506479.1| Putative pirin-related protein [Methyloversatilis universalis
          FAM5]
 gb|EGK70178.1| Putative pirin-related protein [Methyloversatilis universalis
          FAM5]
          Length = 288

 Score = 90.5 bits (223), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 45/98 (45%), Positives = 59/98 (60%), Gaps = 3/98 (3%)

Query: 1  MKKILGIYSSSRQHRIGDGLLAHTLFSKRMLGRHVSPFLLLDHVGSAD---STAPDACAR 57
          MKKI G+YS+ RQH +GDG    +LFS   +GRHVSPFLLLD+ G A    S  P    R
Sbjct: 1  MKKIAGLYSAPRQHWVGDGFPVRSLFSYDSMGRHVSPFLLLDYAGPATFEPSDTPRGVGR 60

Query: 58 QLYRGCNVLTMVQQGRLEYVDADGRKQVLNAGDVQWRS 95
            +RG   +T+V  G + + D+ G   V+  GDVQW +
Sbjct: 61 HPHRGFETVTIVYDGEVAHQDSTGAGGVIGPGDVQWMT 98


>ref|YP_004752392.1| pirin-like protein [Collimonas fungivorans Ter331]
 gb|AEK61569.1| Pirin-like protein [Collimonas fungivorans Ter331]
          Length = 290

 Score = 89.0 bits (219), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 74/138 (53%), Gaps = 9/138 (6%)

Query: 1   MKKILGIYSSSRQHRIGDGLLAHTLFSKRMLGRHVSPFLLLDHVGSAD---STAPDACAR 57
           MKK+LG+YS+ RQH +GDG  A ++FS    G+ +SPFLLLD+ G A+   +T P     
Sbjct: 1   MKKVLGVYSAPRQHWVGDGFPARSMFSYTSHGKQLSPFLLLDYAGPAEFSPTTRPRGVGS 60

Query: 58  QLYRGCNVLTMVQQGRLEYVDADGRKQVLNAGDVQWRSV------TDEHDAASFRAAAAH 111
             +RG   +T+V +G +E+ D+ G   V+  GDVQW +        + H  A  R+    
Sbjct: 61  HPHRGFETVTIVYKGEVEHRDSTGNGGVIGPGDVQWMTAGSGILHQEFHSEAFTRSGGTL 120

Query: 112 FXTRRRHPCPAPGKLSRP 129
              +     PA  K++ P
Sbjct: 121 EMVQLWVNLPAKDKMTAP 138


>ref|YP_576099.1| Pirin-like [Nitrobacter hamburgensis X14]
 gb|ABE61639.1| Pirin-like protein [Nitrobacter hamburgensis X14]
          Length = 288

 Score = 89.0 bits (219), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 44/98 (44%), Positives = 59/98 (60%), Gaps = 3/98 (3%)

Query: 1  MKKILGIYSSSRQHRIGDGLLAHTLFSKRMLGRHVSPFLLLDHVGSADST---APDACAR 57
          M+KILG++S  RQH +GDG    +LFS    G HVSPFLLLD+ G AD T    P     
Sbjct: 1  MRKILGVFSGPRQHWVGDGFPVRSLFSHASHGDHVSPFLLLDYAGPADFTPAEQPRGVGV 60

Query: 58 QLYRGCNVLTMVQQGRLEYVDADGRKQVLNAGDVQWRS 95
            +RG   +T+V QG +E+ D+ G   ++  GDVQW +
Sbjct: 61 HPHRGFETVTIVYQGEVEHRDSTGNGGLIGPGDVQWMT 98


>ref|YP_002873202.1| hypothetical protein PFLU3640 [Pseudomonas fluorescens SBW25]
 emb|CAY49877.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
          Length = 286

 Score = 88.6 bits (218), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 46/99 (46%), Positives = 61/99 (61%), Gaps = 5/99 (5%)

Query: 1  MKKILGIYSSSRQHRIGDGLLAHTLFSKRMLGRHVSPFLLLDHVGSADSTAPDACARQL- 59
          MKK++GIY+S R H +GDG    TLFS   LG+H+SPFLLLDH G  D T P A  R + 
Sbjct: 1  MKKLIGIYTSPRAHWVGDGFPVRTLFSYDTLGKHISPFLLLDHAGPVDFT-PTAQRRGVG 59

Query: 60 ---YRGCNVLTMVQQGRLEYVDADGRKQVLNAGDVQWRS 95
             +RG   +T+V  G +E+ D+ G    +  GDVQW +
Sbjct: 60 QHPHRGFETVTIVYDGEVEHRDSTGAGGKIGPGDVQWMT 98