BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0223.p         (154 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_06838903.1| acyl-CoA dehydrogenase domain protein [Burkho...   213   1e-53
ref|YP_001888989.1| acyl-CoA dehydrogenase type 2 domain [Burkho...   208   2e-52
ref|YP_553955.1| hypothetical protein Bxe_B1358 [Burkholderia xe...   208   3e-52
ref|YP_003908910.1| acyl-CoA dehydrogenase domain-containing pro...   206   7e-52
ref|ZP_02466121.1| Acyl-CoA dehydrogenases [Burkholderia thailan...   204   4e-51

>ref|ZP_06838903.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
 gb|EFG73349.1| acyl-CoA dehydrogenase domain protein [Burkholderia sp. Ch1-1]
          Length = 426

 Score =  213 bits (541), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 106/150 (70%), Positives = 122/150 (81%)

Query: 3   RDAVAFTQARTRTFGVPGVSSPRENPLVHRVVGRLASLAWSAEQLVNAVANAIHAVHQAR 62
           RDAVAFTQARTRTFGVPG SSPR+NPLVHRVVGRLASLA+S + +  ++A AI  V  AR
Sbjct: 263 RDAVAFTQARTRTFGVPGASSPRDNPLVHRVVGRLASLAYSTQSISTSLARAIDEVSVAR 322

Query: 63  LAGTAKPEDYIALDVQTFQAQQVVIGQVLEAATLLFEVGGASATSDKRRLDRHWRNARTL 122
             G    + YI LD+QTFQAQQ+VI Q L+AATLLFEVGGASATS+ RR DR+WRNAR L
Sbjct: 323 QEGRTDEQTYIHLDIQTFQAQQIVIEQTLQAATLLFEVGGASATSEARRFDRYWRNARVL 382

Query: 123 ASHNPATQREAAIGDYHLNDNPPNERFGVS 152
           ASHNPA  REAAIGD++LN N  +ERFGV+
Sbjct: 383 ASHNPAIIREAAIGDFYLNGNAHSERFGVA 412


>ref|YP_001888989.1| acyl-CoA dehydrogenase type 2 domain [Burkholderia phytofirmans
           PsJN]
 gb|ACD19619.1| Acyl-CoA dehydrogenase type 2 domain [Burkholderia phytofirmans
           PsJN]
          Length = 426

 Score =  208 bits (530), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 104/150 (69%), Positives = 121/150 (80%)

Query: 3   RDAVAFTQARTRTFGVPGVSSPRENPLVHRVVGRLASLAWSAEQLVNAVANAIHAVHQAR 62
           RDAVAFTQ +TRTFGVPG SSPR+NPLVHRVVGRLASLA+S + +  ++A AI  V  AR
Sbjct: 263 RDAVAFTQTKTRTFGVPGESSPRDNPLVHRVVGRLASLAYSTQSISASLARAIDDVSVAR 322

Query: 63  LAGTAKPEDYIALDVQTFQAQQVVIGQVLEAATLLFEVGGASATSDKRRLDRHWRNARTL 122
             G    + YI LD+QTFQAQQ+VI Q L+AATLLFEVGGASATS+ RR DR+WRNAR L
Sbjct: 323 QEGRTNEQTYINLDIQTFQAQQIVIEQTLQAATLLFEVGGASATSETRRFDRYWRNARVL 382

Query: 123 ASHNPATQREAAIGDYHLNDNPPNERFGVS 152
           ASHNPA  REAAIGD++LN N  +ERFGV+
Sbjct: 383 ASHNPAIIREAAIGDFYLNGNAHSERFGVA 412


>ref|YP_553955.1| hypothetical protein Bxe_B1358 [Burkholderia xenovorans LB400]
 gb|ABE34605.1| conserved hypothetical protein [Burkholderia xenovorans LB400]
          Length = 434

 Score =  208 bits (529), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 104/150 (69%), Positives = 121/150 (80%)

Query: 3   RDAVAFTQARTRTFGVPGVSSPRENPLVHRVVGRLASLAWSAEQLVNAVANAIHAVHQAR 62
           RDAVAFTQARTRTFGVPG SSPR+NPLVHRVVGRLASLA+S + +  ++A AI  V  AR
Sbjct: 263 RDAVAFTQARTRTFGVPGASSPRDNPLVHRVVGRLASLAYSTQSISTSLARAIDEVSVAR 322

Query: 63  LAGTAKPEDYIALDVQTFQAQQVVIGQVLEAATLLFEVGGASATSDKRRLDRHWRNARTL 122
             G    + YI LD+QTFQAQQ+VI Q L+AATLLFEVGGASATS+  R DR+WRNAR L
Sbjct: 323 EEGRTGEQTYIHLDIQTFQAQQIVIEQTLQAATLLFEVGGASATSETHRFDRYWRNARVL 382

Query: 123 ASHNPATQREAAIGDYHLNDNPPNERFGVS 152
           ASHNPA  REAAIGD++LN +  +ERFGV+
Sbjct: 383 ASHNPAIIREAAIGDFYLNGSAHSERFGVA 412


>ref|YP_003908910.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
 gb|ADN59619.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia sp.
           CCGE1003]
          Length = 421

 Score =  206 bits (525), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 101/150 (67%), Positives = 119/150 (79%)

Query: 3   RDAVAFTQARTRTFGVPGVSSPRENPLVHRVVGRLASLAWSAEQLVNAVANAIHAVHQAR 62
           RDAVAFT+ +TRTFG+PG SSPR+NPLV RV+GRLASLA+S + +  ++A AI  V  AR
Sbjct: 265 RDAVAFTRGKTRTFGIPGESSPRDNPLVQRVIGRLASLAYSTQSITASLARAIDDVVVAR 324

Query: 63  LAGTAKPEDYIALDVQTFQAQQVVIGQVLEAATLLFEVGGASATSDKRRLDRHWRNARTL 122
             G    E Y  LD+QTFQAQQ+VI Q L+AATLLFE GGASATS+ RR DR+WRNAR L
Sbjct: 325 QQGRTTEETYFRLDIQTFQAQQIVIEQTLQAATLLFEAGGASATSETRRFDRYWRNARVL 384

Query: 123 ASHNPATQREAAIGDYHLNDNPPNERFGVS 152
           ASHNPA  REAAIGD++LN NP NERFGV+
Sbjct: 385 ASHNPAIIREAAIGDFYLNGNPHNERFGVA 414


>ref|ZP_02466121.1| Acyl-CoA dehydrogenases [Burkholderia thailandensis MSMB43]
          Length = 433

 Score =  204 bits (518), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 101/154 (65%), Positives = 122/154 (79%)

Query: 1   VQRDAVAFTQARTRTFGVPGVSSPRENPLVHRVVGRLASLAWSAEQLVNAVANAIHAVHQ 60
           V RDAVAFT+ RTRTFGVPG SSPR +PLV RV+GRLASLA+S + LV A+A  +  +  
Sbjct: 276 VLRDAVAFTRDRTRTFGVPGASSPRHDPLVQRVIGRLASLAYSTQSLVAAIARTLDDLSA 335

Query: 61  ARLAGTAKPEDYIALDVQTFQAQQVVIGQVLEAATLLFEVGGASATSDKRRLDRHWRNAR 120
           AR A +A  + Y+ +D+Q FQAQQ+V+ Q LEAATLLFEVGGASATS+ RR DRHWRNAR
Sbjct: 336 ARAADSATEDAYVRVDIQAFQAQQIVLAQTLEAATLLFEVGGASATSETRRFDRHWRNAR 395

Query: 121 TLASHNPATQREAAIGDYHLNDNPPNERFGVSYA 154
            LASHNPA  REAAIG+Y+LN    NERFG+++A
Sbjct: 396 VLASHNPAIVREAAIGNYYLNGVGHNERFGIAHA 429