BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0221.p (239 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003980330.1| D-methionine-binding lipoprotein MetQ [Achro... 296 2e-78 gb|EGP42518.1| D-methionine-binding lipoprotein MetQ [Achromobac... 294 9e-78 gb|EFV86813.1| NLPA lipoprotein [Achromobacter xylosoxidans C54] 293 2e-77 ref|YP_004486381.1| NLPA lipoprotein [Delftia sp. Cs1-4] >gi|333... 290 2e-76 ref|YP_001566628.1| NLPA lipoprotein [Delftia acidovorans SPH-1]... 290 2e-76 >ref|YP_003980330.1| D-methionine-binding lipoprotein MetQ [Achromobacter xylosoxidans A8] gb|ADP17615.1| D-methionine-binding lipoprotein MetQ [Achromobacter xylosoxidans A8] Length = 271 Score = 296 bits (758), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 148/214 (69%), Positives = 172/214 (80%), Gaps = 1/214 (0%) Query: 3 LSYRFRVHAIVAAALISVMGLTQAQAAD-KPLRVGVRGGTDEQIWEVVTKVARKNGLNVE 61 ++ RF + A + M A +AD KPL+VGVRGG DEQIWEVV +VA+KNGL VE Sbjct: 1 MTSRFFKRLLGAVLASAAMFHGPAFSADPKPLKVGVRGGVDEQIWEVVAQVAKKNGLAVE 60 Query: 62 AVVISGAASPNEALNNGDLDANSFQHIPFLRDQIKQRGYKLSVVGNTYISPIAFYSKKYK 121 V+I+G ASPNEALNNGDL+AN+FQHIPFL DQIKQRGYKL V NT ISPIAFYSKKYK Sbjct: 61 PVIITGTASPNEALNNGDLNANAFQHIPFLNDQIKQRGYKLVSVANTLISPIAFYSKKYK 120 Query: 122 SIRDLPDGAKVAIPNDPSNQTRALVVLRDAGLITLRDGFDPFTGTVSLNDITAYKKKITL 181 S++DLP+GA+V IPNDPSNQTRALV+LRD GLITL+DGFDP TGT +L D+TA K++ Sbjct: 121 SLKDLPEGARVGIPNDPSNQTRALVILRDQGLITLKDGFDPATGTATLADVTANPKRLNF 180 Query: 182 TEAASVVLARSLEDVDTAAIVNTFAYQAGXAMKR 215 E+ASVVLARSL DVDTAAIVN+FAYQAG R Sbjct: 181 VESASVVLARSLPDVDTAAIVNSFAYQAGLIATR 214 >gb|EGP42518.1| D-methionine-binding lipoprotein MetQ [Achromobacter xylosoxidans AXX-A] Length = 279 Score = 294 bits (752), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 141/185 (76%), Positives = 159/185 (85%) Query: 31 KPLRVGVRGGTDEQIWEVVTKVARKNGLNVEAVVISGAASPNEALNNGDLDANSFQHIPF 90 KPL+VGVRGG DEQIWEVV +VA+KNGL VE V+I+G ASPNEALNNGDLDAN+FQHIPF Sbjct: 38 KPLKVGVRGGVDEQIWEVVAQVAKKNGLAVEPVIITGTASPNEALNNGDLDANAFQHIPF 97 Query: 91 LRDQIKQRGYKLSVVGNTYISPIAFYSKKYKSIRDLPDGAKVAIPNDPSNQTRALVVLRD 150 L DQIKQRGYKL V NT ISPIAFYSKKYKS++ LP+GAKV IPNDPSNQTRALV+LRD Sbjct: 98 LNDQIKQRGYKLVSVANTLISPIAFYSKKYKSLQALPEGAKVGIPNDPSNQTRALVILRD 157 Query: 151 AGLITLRDGFDPFTGTVSLNDITAYKKKITLTEAASVVLARSLEDVDTAAIVNTFAYQAG 210 GLITL+DGFDP TGT +L D+T+ +K+ E+ASVVLARSL DVDTAAIVN+FAYQAG Sbjct: 158 QGLITLKDGFDPATGTATLADVTSNPRKLDFVESASVVLARSLPDVDTAAIVNSFAYQAG 217 Query: 211 XAMKR 215 R Sbjct: 218 LIATR 222 >gb|EFV86813.1| NLPA lipoprotein [Achromobacter xylosoxidans C54] Length = 279 Score = 293 bits (750), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 141/185 (76%), Positives = 159/185 (85%) Query: 31 KPLRVGVRGGTDEQIWEVVTKVARKNGLNVEAVVISGAASPNEALNNGDLDANSFQHIPF 90 KPL+VGVRGG DEQIWEVV +VA++NGL VE VVI+G ASPNEALNNGDLDAN+FQHIPF Sbjct: 38 KPLKVGVRGGVDEQIWEVVAQVAKRNGLAVEPVVITGTASPNEALNNGDLDANAFQHIPF 97 Query: 91 LRDQIKQRGYKLSVVGNTYISPIAFYSKKYKSIRDLPDGAKVAIPNDPSNQTRALVVLRD 150 L DQIKQRGYKL V NT ISPIAFYSKKYKS++ LP+GAKV IPNDPSNQTRALV+LRD Sbjct: 98 LNDQIKQRGYKLVSVANTLISPIAFYSKKYKSLQALPEGAKVGIPNDPSNQTRALVILRD 157 Query: 151 AGLITLRDGFDPFTGTVSLNDITAYKKKITLTEAASVVLARSLEDVDTAAIVNTFAYQAG 210 GLITL+DGFDP TGT +L D+T+ +K+ E+ASVVLARSL DVDTAAIVN+FAYQAG Sbjct: 158 QGLITLKDGFDPATGTATLADVTSNPRKLDFVESASVVLARSLPDVDTAAIVNSFAYQAG 217 Query: 211 XAMKR 215 R Sbjct: 218 LIATR 222 >ref|YP_004486381.1| NLPA lipoprotein [Delftia sp. Cs1-4] gb|AEF88026.1| NLPA lipoprotein [Delftia sp. Cs1-4] Length = 270 Score = 290 bits (741), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 141/224 (62%), Positives = 174/224 (77%), Gaps = 7/224 (3%) Query: 3 LSYRFRVHAIVAAALISVMGLTQAQAADKPLRVGVRGGTDEQIWEVVTKVARKNGLNVEA 62 + R + + A A ++ M A PLRVGVRGG DE+IWEVVT+VAR+ GL V+ Sbjct: 1 MDKRVFLRGLAAGASVAAMSGAIRAAQAGPLRVGVRGGVDEEIWEVVTRVAREQGLQVKP 60 Query: 63 VVISGAASPNEALNNGDLDANSFQHIPFLRDQIKQRGYKLSVVGNTYISPIAFYSKKYKS 122 VVISGAASPNEALNNGD++ANSFQH+PFLRDQ +QRGY+L G+TYISPIAFYSKK+K Sbjct: 61 VVISGAASPNEALNNGDIEANSFQHVPFLRDQNQQRGYRLVAAGDTYISPIAFYSKKHKR 120 Query: 123 IRDLPDGAKVAIPNDPSNQTRALVVLRDAGLITLRDGFDPFTGTVSLNDITAYKKKITLT 182 + DLP GA++ IPNDPSNQTRALVVL+D G++ LR+GFDPF GT L DI +Y+KK+ L Sbjct: 121 LADLPAGARLGIPNDPSNQTRALVVLQDQGILKLREGFDPFKGTAGLADIVSYQKKVQLV 180 Query: 183 EAASVVLARSLEDVDTAAIVNTFAYQAGX-------AMKRRRRS 219 EAASVVLARSL+D+D +AIVN+FAYQAG A++RR R+ Sbjct: 181 EAASVVLARSLDDLDASAIVNSFAYQAGLIATRDGIAVERRERN 224 >ref|YP_001566628.1| NLPA lipoprotein [Delftia acidovorans SPH-1] gb|ABX38243.1| NLPA lipoprotein [Delftia acidovorans SPH-1] Length = 270 Score = 290 bits (741), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 141/224 (62%), Positives = 174/224 (77%), Gaps = 7/224 (3%) Query: 3 LSYRFRVHAIVAAALISVMGLTQAQAADKPLRVGVRGGTDEQIWEVVTKVARKNGLNVEA 62 + R + + A A ++ M A PLRVGVRGG DE+IWEVVT+VAR+ GL V+ Sbjct: 1 MDKRVFLRGLAAGASVAAMSGAIRAAQAGPLRVGVRGGVDEEIWEVVTRVAREQGLQVKP 60 Query: 63 VVISGAASPNEALNNGDLDANSFQHIPFLRDQIKQRGYKLSVVGNTYISPIAFYSKKYKS 122 VVISGAASPNEALNNGD++ANSFQH+PFLRDQ +QRGY+L G+TYISPIAFYSKK+K Sbjct: 61 VVISGAASPNEALNNGDIEANSFQHVPFLRDQNQQRGYRLVAAGDTYISPIAFYSKKHKR 120 Query: 123 IRDLPDGAKVAIPNDPSNQTRALVVLRDAGLITLRDGFDPFTGTVSLNDITAYKKKITLT 182 + DLP GA++ IPNDPSNQTRALVVL+D G++ LR+GFDPF GT L DI +Y+KK+ L Sbjct: 121 LADLPAGARLGIPNDPSNQTRALVVLQDQGILKLREGFDPFKGTAGLADIASYQKKVQLV 180 Query: 183 EAASVVLARSLEDVDTAAIVNTFAYQAGX-------AMKRRRRS 219 EAASVVLARSL+D+D +AIVN+FAYQAG A++RR R+ Sbjct: 181 EAASVVLARSLDDLDASAIVNSFAYQAGLIATRDGIAVERRERN 224