BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0220.p         (59 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003980330.1| D-methionine-binding lipoprotein MetQ [Achro...    98   5e-19
gb|EGP42518.1| D-methionine-binding lipoprotein MetQ [Achromobac...    97   6e-19
gb|EFV86813.1| NLPA lipoprotein [Achromobacter xylosoxidans C54]       96   1e-18
ref|YP_840997.1| ABC transporter periplasmic protein [Ralstonia ...    95   3e-18
ref|YP_585992.1| DL-methionine transporter subunit [Cupriavidus ...    93   1e-17

>ref|YP_003980330.1| D-methionine-binding lipoprotein MetQ [Achromobacter xylosoxidans
           A8]
 gb|ADP17615.1| D-methionine-binding lipoprotein MetQ [Achromobacter xylosoxidans
           A8]
          Length = 271

 Score = 97.8 bits (242), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 50/59 (84%)

Query: 1   VRDGIAVEKRENNPYVNIIVVREQDKNAAWVAPLVKAYQSEEVRQFIQKQYGGSVVPVF 59
            RDGIAVEK++NNPYVNII VREQDKNA WV  LVKAY SEEVRQFI  +Y GSV+PVF
Sbjct: 213 TRDGIAVEKKDNNPYVNIIAVREQDKNAPWVPELVKAYHSEEVRQFILSKYEGSVIPVF 271


>gb|EGP42518.1| D-methionine-binding lipoprotein MetQ [Achromobacter xylosoxidans
           AXX-A]
          Length = 279

 Score = 97.4 bits (241), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 50/59 (84%)

Query: 1   VRDGIAVEKRENNPYVNIIVVREQDKNAAWVAPLVKAYQSEEVRQFIQKQYGGSVVPVF 59
            RDGIAVEK+ENNPYVNII VRE+DKNA WV  LVKAY SEEVRQFI  +Y GSV+PVF
Sbjct: 221 TRDGIAVEKKENNPYVNIIAVREKDKNAPWVPELVKAYHSEEVRQFILSKYEGSVIPVF 279


>gb|EFV86813.1| NLPA lipoprotein [Achromobacter xylosoxidans C54]
          Length = 279

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/59 (76%), Positives = 50/59 (84%)

Query: 1   VRDGIAVEKRENNPYVNIIVVREQDKNAAWVAPLVKAYQSEEVRQFIQKQYGGSVVPVF 59
            RDGIAVEK+ENNPYVNII VRE+D+NA WV  LVKAY SEEVRQFI  +Y GSV+PVF
Sbjct: 221 TRDGIAVEKKENNPYVNIIAVREKDRNAPWVPELVKAYHSEEVRQFILSKYEGSVIPVF 279


>ref|YP_840997.1| ABC transporter periplasmic protein [Ralstonia eutropha H16]
 emb|CAJ96267.1| ABC-type transporter, periplasmic component: MUTfamily [Ralstonia
           eutropha H16]
          Length = 274

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 44/59 (74%), Positives = 51/59 (86%)

Query: 1   VRDGIAVEKRENNPYVNIIVVREQDKNAAWVAPLVKAYQSEEVRQFIQKQYGGSVVPVF 59
            RDGIAVEKRE+NPYVN+I VRE+DK A WVA LVKAYQS+EVR+FIQ +Y GSV+P F
Sbjct: 216 TRDGIAVEKREHNPYVNVIAVREKDKGAPWVARLVKAYQSDEVRKFIQTKYQGSVIPAF 274


>ref|YP_585992.1| DL-methionine transporter subunit [Cupriavidus metallidurans CH34]
 gb|ABF10723.1| DL-methionine transporter subunit [Cupriavidus metallidurans CH34]
          Length = 273

 Score = 93.2 bits (230), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/58 (70%), Positives = 50/58 (86%)

Query: 2   RDGIAVEKRENNPYVNIIVVREQDKNAAWVAPLVKAYQSEEVRQFIQKQYGGSVVPVF 59
           RDGIAVEKRENNPYVN+I VRE+D+NA WVA LVK+YQS+ VR+FI  +Y GS++P F
Sbjct: 216 RDGIAVEKRENNPYVNVIAVREKDRNAPWVATLVKSYQSDAVRKFILTKYQGSIIPAF 273