BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0207.p         (112 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004755013.1| hypothetical protein CFU_4369 [Collimonas fu...   181   4e-44
ref|ZP_02905807.1| conserved hypothetical protein [Burkholderia ...   177   6e-43
ref|YP_004153766.1| hypothetical protein Varpa_1439 [Variovorax ...   176   7e-43
ref|YP_002947191.1| protein of unknown function DUF718 [Variovor...   174   3e-42
ref|YP_773111.1| hypothetical protein Bamb_1219 [Burkholderia am...   174   6e-42

>ref|YP_004755013.1| hypothetical protein CFU_4369 [Collimonas fungivorans Ter331]
 gb|AEK64190.1| conserved hypothetical protein [Collimonas fungivorans Ter331]
          Length = 210

 Score =  181 bits (458), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 83/112 (74%), Positives = 91/112 (81%)

Query: 1   MRYCLALDLKDDAALIARYEEHHRRIWPEIAAHLRAHGVTGMEIYRLGTRMTMIMDTDDA 60
           MRYCL LDLKDD +LI RYE  HRRIWPEIAAHLR HGV GMEIYRLGTR+ M+M+TDDA
Sbjct: 98  MRYCLVLDLKDDPSLIGRYETLHRRIWPEIAAHLRLHGVLGMEIYRLGTRLVMLMETDDA 157

Query: 61  VYDAAAMAQAMESDPKVQEWETLMWQFQAPTPWTPQGEKWVPMAKIFDLTAQ 112
           +Y    MA A  +DPKVQEWETLMW+FQA TPWTP GEKWV M +IFDL  Q
Sbjct: 158 IYSPERMANAARTDPKVQEWETLMWEFQAATPWTPPGEKWVAMTQIFDLKEQ 209


>ref|ZP_02905807.1| conserved hypothetical protein [Burkholderia ambifaria MEX-5]
 gb|EDT43038.1| conserved hypothetical protein [Burkholderia ambifaria MEX-5]
          Length = 113

 Score =  177 bits (448), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 80/112 (71%), Positives = 93/112 (83%)

Query: 1   MRYCLALDLKDDAALIARYEEHHRRIWPEIAAHLRAHGVTGMEIYRLGTRMTMIMDTDDA 60
           MRYCLALDLKDD ALIARYEEHHR +WPE+  HLR HGV GMEI+RLGTRMTM+MDTDDA
Sbjct: 1   MRYCLALDLKDDPALIARYEEHHRAVWPEVLRHLREHGVRGMEIFRLGTRMTMVMDTDDA 60

Query: 61  VYDAAAMAQAMESDPKVQEWETLMWQFQAPTPWTPQGEKWVPMAKIFDLTAQ 112
           V+DA  +A+A +++P V+ WE +MW+FQAPTPWTP G KW PM  IFDL  Q
Sbjct: 61  VFDAERLARATKANPTVRAWEDVMWKFQAPTPWTPAGMKWTPMTCIFDLRTQ 112


>ref|YP_004153766.1| hypothetical protein Varpa_1439 [Variovorax paradoxus EPS]
 gb|ADU35655.1| protein of unknown function DUF718 [Variovorax paradoxus EPS]
          Length = 109

 Score =  176 bits (447), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 81/109 (74%), Positives = 94/109 (86%)

Query: 1   MRYCLALDLKDDAALIARYEEHHRRIWPEIAAHLRAHGVTGMEIYRLGTRMTMIMDTDDA 60
           MR+CLALDLKDD  LIA YE +HR IWPE+ AHL AHGVTGMEIYRLGTRM M+M+TDDA
Sbjct: 1   MRHCLALDLKDDPVLIAEYEAYHRNIWPEVRAHLHAHGVTGMEIYRLGTRMVMLMETDDA 60

Query: 61  VYDAAAMAQAMESDPKVQEWETLMWQFQAPTPWTPQGEKWVPMAKIFDL 109
            YDA AMA A ++DPK++EWE LMW+FQAPTPWTP+GEKWV M +IF+L
Sbjct: 61  RYDAEAMALASQNDPKIREWEDLMWKFQAPTPWTPEGEKWVGMERIFEL 109


>ref|YP_002947191.1| protein of unknown function DUF718 [Variovorax paradoxus S110]
 gb|ACS21925.1| protein of unknown function DUF718 [Variovorax paradoxus S110]
          Length = 109

 Score =  174 bits (442), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 81/109 (74%), Positives = 92/109 (84%)

Query: 1   MRYCLALDLKDDAALIARYEEHHRRIWPEIAAHLRAHGVTGMEIYRLGTRMTMIMDTDDA 60
           MR+CLALDLKDD ALIA YE +HR IWPE+ AHL AHGVTGMEIYRLGTRM M+M+TDDA
Sbjct: 1   MRHCLALDLKDDPALIAEYEAYHRNIWPEVRAHLHAHGVTGMEIYRLGTRMVMLMETDDA 60

Query: 61  VYDAAAMAQAMESDPKVQEWETLMWQFQAPTPWTPQGEKWVPMAKIFDL 109
            YDA AMA A  SDPK++ WE LMW+FQAPTPWTP+GEKW+ M +IF L
Sbjct: 61  RYDAEAMAAATRSDPKIRAWEELMWKFQAPTPWTPEGEKWLEMDRIFKL 109


>ref|YP_773111.1| hypothetical protein Bamb_1219 [Burkholderia ambifaria AMMD]
 gb|ABI86777.1| conserved hypothetical protein [Burkholderia ambifaria AMMD]
          Length = 113

 Score =  174 bits (440), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 79/112 (70%), Positives = 91/112 (81%)

Query: 1   MRYCLALDLKDDAALIARYEEHHRRIWPEIAAHLRAHGVTGMEIYRLGTRMTMIMDTDDA 60
           MRYCLALDLKDD  LIARYEEHHR +WP++  HLR HGV GMEI+RLGTRMTM+MDTDDA
Sbjct: 1   MRYCLALDLKDDPDLIARYEEHHRAVWPDVLRHLREHGVRGMEIFRLGTRMTMVMDTDDA 60

Query: 61  VYDAAAMAQAMESDPKVQEWETLMWQFQAPTPWTPQGEKWVPMAKIFDLTAQ 112
           V++A  MA+A E++P V+ WE +MW FQAPTPWTP G KW PM  IFDL  Q
Sbjct: 61  VFNAERMAKAAEANPTVRAWEDVMWTFQAPTPWTPAGLKWTPMTCIFDLRTQ 112