BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0188.p (377 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773910.1| drug efflux lipoprotein [Herbaspirillum sero... 609 e-172 ref|YP_004751489.1| outer membrane protein of RND family multidr... 506 e-141 ref|YP_001100956.1| outer membrane transport protein involved in... 484 e-134 ref|ZP_08273884.1| outer membrane transport protein involved in ... 474 e-131 ref|YP_001354628.1| drug efflux lipoprotein [Janthinobacterium s... 465 e-129 >ref|YP_003773910.1| drug efflux lipoprotein [Herbaspirillum seropedicae SmR1] gb|ADJ62002.1| drug efflux lipoprotein [Herbaspirillum seropedicae SmR1] Length = 483 Score = 609 bits (1571), Expect = e-172, Method: Compositional matrix adjust. Identities = 305/377 (80%), Positives = 341/377 (90%) Query: 1 LLPTLNATGSESRTRLSASQSTTGAPLITKSYQVGLAIPAYELDFFGRVRSLKDAALSTY 60 LLP LN +G+ +RTR +ASQS TG P I+ SYQVGLA+PAYELDFFGRVR+LKDAAL++Y Sbjct: 106 LLPNLNLSGNAARTRTAASQSLTGQPTISNSYQVGLAVPAYELDFFGRVRNLKDAALASY 165 Query: 61 LSTEEARQSVQISLVSQVAQAYLTERSYAEQLKLAQQTLESRQSNLGLAQKRFDVGASSA 120 LSTEEA++S QISLV+QVAQAYL ERSYAEQLKLA +TL+SRQSNL LAQKR DVGAS+A Sbjct: 166 LSTEEAQKSAQISLVAQVAQAYLAERSYAEQLKLADETLKSRQSNLDLAQKRLDVGASTA 225 Query: 121 LDLRLSDTLVQSARTSVATLLRQRAQAENALTLLVGTNVKDLPAGQDLSLQNIVTDIPAG 180 LD RL+ TLV+SAR + L RQRAQAENALTLLVG + +LP Q LS + IVTDIPAG Sbjct: 226 LDFRLTQTLVESARVAKTQLERQRAQAENALTLLVGKKIGELPPAQLLSDEKIVTDIPAG 285 Query: 181 VPSDLLTRRPDIRSAEQKLLAANANIGAARAAFFPRISLTGSFGSASNSLGGLFDSGSGA 240 +PSDLLT RPDIRSAEQ LLAANANIGAARAAFFPRISLTG+FGSAS++LGGLF+SGSGA Sbjct: 286 LPSDLLTNRPDIRSAEQSLLAANANIGAARAAFFPRISLTGNFGSASSTLGGLFESGSGA 345 Query: 241 WSYGPQLSLPIFDFGRNSANLDVAEVRKNQAIVTYEKTIQTAFREVADALVARGTLDEQI 300 WS+GP LSLPIFDFGRNSANLD+AEVRKN+A+VTYEK IQTAFREVADALVARG+LDEQ+ Sbjct: 346 WSFGPSLSLPIFDFGRNSANLDLAEVRKNKAVVTYEKAIQTAFREVADALVARGSLDEQV 405 Query: 301 EAQEAFLKAQQERLNLTDLRYKNGIASSLDQLDAQRDLFSAQQALIQARQLRLNNAIDLY 360 +AQEAFL AQQERL LTDLR+KNGIASSLDQLDAQRDLFSAQQALIQARQLRLNNAIDLY Sbjct: 406 KAQEAFLAAQQERLKLTDLRFKNGIASSLDQLDAQRDLFSAQQALIQARQLRLNNAIDLY 465 Query: 361 RALGGGLNETTVAAAAK 377 +ALGGGLNE TV+ AAK Sbjct: 466 KALGGGLNENTVSVAAK 482 >ref|YP_004751489.1| outer membrane protein of RND family multidrug efflux pump [Collimonas fungivorans Ter331] gb|AEK60666.1| Outer membrane protein of RND family multidrug efflux pump [Collimonas fungivorans Ter331] Length = 480 Score = 506 bits (1303), Expect = e-141, Method: Compositional matrix adjust. Identities = 259/374 (69%), Positives = 306/374 (81%) Query: 2 LPTLNATGSESRTRLSASQSTTGAPLITKSYQVGLAIPAYELDFFGRVRSLKDAALSTYL 61 LP + S +R R + Q G + YQVGL + ++ELDFFGRVRSLKDAAL++YL Sbjct: 106 LPNFDGNFSRTRGRTATYQLVPGQNAVNNVYQVGLNMTSFELDFFGRVRSLKDAALASYL 165 Query: 62 STEEARQSVQISLVSQVAQAYLTERSYAEQLKLAQQTLESRQSNLGLAQKRFDVGASSAL 121 +TEEARQS QISL+SQVAQAYLTE+SYAEQ +LA+QTL+SR + L + RF+VGASS L Sbjct: 166 ATEEARQSAQISLISQVAQAYLTEQSYAEQERLARQTLDSRLDDYKLDKMRFEVGASSEL 225 Query: 122 DLRLSDTLVQSARTSVATLLRQRAQAENALTLLVGTNVKDLPAGQDLSLQNIVTDIPAGV 181 DLR S+TLVQSAR S+ TL+RQR QA NAL LLVG + DLPA Q LS + IVTDIPAG+ Sbjct: 226 DLRNSETLVQSARVSLTTLVRQRGQATNALVLLVGKPLGDLPAPQSLSDEQIVTDIPAGL 285 Query: 182 PSDLLTRRPDIRSAEQKLLAANANIGAARAAFFPRISLTGSFGSASNSLGGLFDSGSGAW 241 PSDLL RRPDIR AEQ+L +ANANIGAARAAFFP ISLT G+AS SLG LF +GS W Sbjct: 286 PSDLLNRRPDIREAEQQLRSANANIGAARAAFFPTISLTAGIGNASTSLGSLFSAGSRTW 345 Query: 242 SYGPQLSLPIFDFGRNSANLDVAEVRKNQAIVTYEKTIQTAFREVADALVARGTLDEQIE 301 S+ PQL+LPIF+ GRN ANL ++E+RKN AI +YEKTIQ+AFREVADALVARGTL+EQ+ Sbjct: 346 SFVPQLTLPIFEGGRNRANLSLSEIRKNLAIASYEKTIQSAFREVADALVARGTLEEQLA 405 Query: 302 AQEAFLKAQQERLNLTDLRYKNGIASSLDQLDAQRDLFSAQQALIQARQLRLNNAIDLYR 361 AQ+AFLKAQ++R+ LT+LRYKNGIASS D+L+AQRDLFSAQQ+LIQ RQLRLNNAIDLYR Sbjct: 406 AQDAFLKAQEQRVKLTELRYKNGIASSTDRLNAQRDLFSAQQSLIQTRQLRLNNAIDLYR 465 Query: 362 ALGGGLNETTVAAA 375 +LGGGLNE T AA Sbjct: 466 SLGGGLNENTAVAA 479 >ref|YP_001100956.1| outer membrane transport protein involved in copper (silver) tolerance [Herminiimonas arsenicoxydans] emb|CAL62835.1| Outer membrane protein oprM [Herminiimonas arsenicoxydans] Length = 474 Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust. Identities = 252/378 (66%), Positives = 305/378 (80%), Gaps = 1/378 (0%) Query: 1 LLPTLNATGSESRTRLSASQSTTGAPLITKSYQVGLAIPAYELDFFGRVRSLKDAALSTY 60 LLP LN T + SR R AS S TG ++ +YQVGL++ ++ELDFFGRV SL DAAL++Y Sbjct: 97 LLPNLNGTFTGSRARTPASISPTGIDSVSSAYQVGLSLASFELDFFGRVHSLNDAALASY 156 Query: 61 LSTEEARQSVQISLVSQVAQAYLTERSYAEQLKLAQQTLESRQSNLGLAQKRFDVGASSA 120 L+TEEA+++ ISLV++VA+AYL ER++AEQL LAQ TL+SR + LA++RF+VGASSA Sbjct: 157 LATEEAQRAAHISLVAEVAKAYLAERAFAEQLALAQSTLKSRGTAYDLAKQRFEVGASSA 216 Query: 121 LDLRLSDTLVQSARTSVATLLRQRAQAENALTLLVGTNVKDLPAGQDLSLQNIVTDIPAG 180 LDLR ++ L+QSAR + TL RQRAQA NALTLLVG + P Q LS QNIVTDIPAG Sbjct: 217 LDLRQNEALLQSARVAQVTLARQRAQALNALTLLVGQPLTGFPEAQPLSAQNIVTDIPAG 276 Query: 181 VPSDLLTRRPDIRSAEQKLLAANANIGAARAAFFPRISLTGSFGSASNSLGGLFDSGSGA 240 +PSDLLT+RPDIRSAEQ LLAANANIGAARAAFFPRISLT G+AS++L LFDSG+ A Sbjct: 277 LPSDLLTQRPDIRSAEQSLLAANANIGAARAAFFPRISLTAGIGTASSTLSNLFDSGTRA 336 Query: 241 WSYGPQLSLPIFDFGRNSANLDVAEVRKNQAIVTYEKTIQTAFREVADALVARGTLDEQI 300 W++ PQL LPIFD GRNSANL ++EVRKN AI YEK+IQ+AFREV+DALVAR L+EQI Sbjct: 337 WTFAPQLVLPIFDAGRNSANLTLSEVRKNIAIANYEKSIQSAFREVSDALVARDLLEEQI 396 Query: 301 EAQEAFLKAQQERLNLTDLRYKNGIASSLDQLDAQRDLFSAQQALIQARQLRLNNAIDLY 360 +AQ +AQ ERL L D R++NGIASSLD LDAQR+LFSA+Q L+QAR LRL NAIDLY Sbjct: 397 DAQRRVQEAQAERLKLADQRFQNGIASSLDVLDAQRELFSAEQDLVQARLLRLTNAIDLY 456 Query: 361 RALGGGLNET-TVAAAAK 377 R+LGGGL E+ +VAA K Sbjct: 457 RSLGGGLTESNSVAATTK 474 >ref|ZP_08273884.1| outer membrane transport protein involved in copper (silver) tolerance [Oxalobacteraceae bacterium IMCC9480] gb|EGF32649.1| outer membrane transport protein involved in copper (silver) tolerance [Oxalobacteraceae bacterium IMCC9480] Length = 448 Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust. Identities = 245/370 (66%), Positives = 292/370 (78%) Query: 1 LLPTLNATGSESRTRLSASQSTTGAPLITKSYQVGLAIPAYELDFFGRVRSLKDAALSTY 60 LLP +N T S +R R+ S S TG P SYQ+GL + ++ELDFFGRVRSL DAAL+ Y Sbjct: 75 LLPNINGTASGARARVPGSLSMTGRPTTGGSYQIGLGLASFELDFFGRVRSLNDAALAQY 134 Query: 61 LSTEEARQSVQISLVSQVAQAYLTERSYAEQLKLAQQTLESRQSNLGLAQKRFDVGASSA 120 L+T EAR SVQISLVS+VA+AYL ER + EQL LA+QTLE R LAQ+R+DVGASS Sbjct: 135 LATSEARLSVQISLVSEVAKAYLAERGFDEQLMLARQTLEGRLQAYQLAQQRYDVGASSE 194 Query: 121 LDLRLSDTLVQSARTSVATLLRQRAQAENALTLLVGTNVKDLPAGQDLSLQNIVTDIPAG 180 LDLRLS+TLVQ+AR S TL RQRAQA NALTLLVG DLPA LS +NI+T I AG Sbjct: 195 LDLRLSETLVQTARVSQLTLQRQRAQASNALTLLVGRATTDLPAAPLLSDENIITTIAAG 254 Query: 181 VPSDLLTRRPDIRSAEQKLLAANANIGAARAAFFPRISLTGSFGSASNSLGGLFDSGSGA 240 +PSDLL RRPDIR+AEQ+L +ANANIGAARAAFFPRISLT + GS+SN+L GLFD+GSG+ Sbjct: 255 LPSDLLMRRPDIRAAEQRLKSANANIGAARAAFFPRISLTAAAGSSSNALSGLFDAGSGS 314 Query: 241 WSYGPQLSLPIFDFGRNSANLDVAEVRKNQAIVTYEKTIQTAFREVADALVARGTLDEQI 300 WS+ PQL LPIFD GRN +NL +A+VR + A+V YEK IQ AFREV+DALVARG L+EQ+ Sbjct: 315 WSFAPQLVLPIFDAGRNRSNLTLAQVRTDLAVVDYEKVIQIAFREVSDALVARGLLEEQV 374 Query: 301 EAQEAFLKAQQERLNLTDLRYKNGIASSLDQLDAQRDLFSAQQALIQARQLRLNNAIDLY 360 AQ+A + AQ R L R+ NGI+S+LD +DAQR+LF AQQAL+Q RQLRL NA+DLY Sbjct: 375 LAQQAVVNAQTVRQTLAQQRFDNGISSALDVVDAQRELFIAQQALVQIRQLRLTNAVDLY 434 Query: 361 RALGGGLNET 370 R+LGGGL ET Sbjct: 435 RSLGGGLTET 444 >ref|YP_001354628.1| drug efflux lipoprotein [Janthinobacterium sp. Marseille] gb|ABR89488.1| drug efflux lipoprotein [Janthinobacterium sp. Marseille] Length = 481 Score = 465 bits (1197), Expect = e-129, Method: Compositional matrix adjust. Identities = 238/369 (64%), Positives = 291/369 (78%) Query: 1 LLPTLNATGSESRTRLSASQSTTGAPLITKSYQVGLAIPAYELDFFGRVRSLKDAALSTY 60 LLPTLN + SR R+ AS S TG+ +++ +YQVGL + A+ELDFFGRVRSL DAAL+ Y Sbjct: 96 LLPTLNVNATGSRARVPASISNTGSSVVSSNYQVGLGLAAFELDFFGRVRSLSDAALAAY 155 Query: 61 LSTEEARQSVQISLVSQVAQAYLTERSYAEQLKLAQQTLESRQSNLGLAQKRFDVGASSA 120 LSTEEA+++ QISLVS+VA+AYL+ERS+AEQ LA+QT ESR L+++RF+VGASSA Sbjct: 156 LSTEEAQRAAQISLVSEVAKAYLSERSFAEQQDLARQTYESRVEAYKLSKQRFEVGASSA 215 Query: 121 LDLRLSDTLVQSARTSVATLLRQRAQAENALTLLVGTNVKDLPAGQDLSLQNIVTDIPAG 180 LDLR + L+Q+AR + RQRAQA NALTLLVG + DLP Q LS Q I+TDIPAG Sbjct: 216 LDLRNDEALLQTARAAELLAQRQRAQAMNALTLLVGQPLTDLPPAQALSSQTILTDIPAG 275 Query: 181 VPSDLLTRRPDIRSAEQKLLAANANIGAARAAFFPRISLTGSFGSASNSLGGLFDSGSGA 240 +PSDLLT+RPDIRSAEQ LL+ANANIGAARAAFFPRISLT G++SN L GLF+ GS + Sbjct: 276 LPSDLLTQRPDIRSAEQTLLSANANIGAARAAFFPRISLTAGLGTSSNELAGLFEGGSRS 335 Query: 241 WSYGPQLSLPIFDFGRNSANLDVAEVRKNQAIVTYEKTIQTAFREVADALVARGTLDEQI 300 WS+ PQL LPIFD GRN NL++AEVRK+ A+ YEK+IQ AFREV+DALVAR LD+Q+ Sbjct: 336 WSFAPQLVLPIFDAGRNRGNLNLAEVRKDIAVANYEKSIQVAFREVSDALVARDLLDQQV 395 Query: 301 EAQEAFLKAQQERLNLTDLRYKNGIASSLDQLDAQRDLFSAQQALIQARQLRLNNAIDLY 360 EAQ +AQ ER R++NGIASSLD LDAQR+LF+AQ +L+Q R RL NA+DLY Sbjct: 396 EAQRLVQEAQAERFKFATQRFQNGIASSLDVLDAQRELFTAQLSLVQVRLTRLTNAVDLY 455 Query: 361 RALGGGLNE 369 R+LGGGL E Sbjct: 456 RSLGGGLVE 464