BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0166.p (594 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_154930.1| ABC-type multidrug transport system, ATPase and... 261 3e-67 gb|ADI84799.1| polysaccharide ABC transporter, ATP-binding/membr... 260 5e-67 gb|EDZ38461.1| Putative ABC transporter, ATP-binding protein [Le... 259 9e-67 ref|YP_743151.1| ABC transporter-like protein [Alkalilimnicola e... 256 8e-66 gb|EAY57469.1| putative ABC transporter, ATP-binding protein [Le... 256 1e-65 >ref|YP_154930.1| ABC-type multidrug transport system, ATPase and permeases [Idiomarina loihiensis L2TR] gb|AAV81381.1| ABC-type multidrug transport system, ATPase and permease components [Idiomarina loihiensis L2TR] Length = 598 Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 193/589 (32%), Positives = 310/589 (52%), Gaps = 36/589 (6%) Query: 18 RKTGIALLLSVLLMSVLDLIGIAIIFPYLQI---ISL---PGEFAQKWLPVGMRDISARA 71 RK I L V+LM+ ++ G+A I P++ + ISL G+ AQ + G + Sbjct: 17 RKRLIGLQFLVVLMAFAEVAGVAAIGPFMALVGDISLLQGEGKLAQLYTVSGFEN--PED 74 Query: 72 LLFWLSGGLALFYIAKN------FLQMRLTRYQFKSAAELTQRLTDDTISLVLGARYATF 125 LFWL G+A+ F RL+ Y + AE++ RL + + Sbjct: 75 FLFWL--GIAVLIALSGAAAVSMFTTWRLSLYAAQVGAEISTRLYKHYMQ----QSWLFH 128 Query: 126 QKFPASEIVG-IASSNTVHATLVFQALLQIINEIVFLSLLLLAIFKINFSLGCASVVMIV 184 +S++ IA +V Q L+Q+ + V ++ AIF N ++ A +++ Sbjct: 129 ASGSSSQLTNRIAQEAGRVTNVVIQPLMQMNAKGVLALVMATAIFIFNPTVALAGLLIFG 188 Query: 185 LLTIGLYFSVIKRTQQLGYVQAVANRKRYELQFSIVTAIRDIKVMGLAVLFDRRSRKISE 244 L + LY +V K+ + G + AN++R++L I+D ++G F+ R K S Sbjct: 189 LAYVALYKTVRKQLGKNGRAISEANQQRFKLMNEGFGGIKDTLLLGRQAEFNERFEKSSH 248 Query: 245 SFADVTW-KYGLNGVLPRLYIELFMLLAFVCAIVLLVLSG--GDLKSMVPVLGVIAITAI 301 GL V PR +EL A V +VL +LS G+L +++PVL V A+ Sbjct: 249 KLGRAQGVTRGLAQV-PRYAMELIAFGA-VIFLVLYLLSAYDGNLGNILPVLSVYALAGF 306 Query: 302 RAIPSFSRLIVGVNAVRYSLSSM----EDLILTRDTLVQSAHVRSVDQITFEREIELRNV 357 + +P+F ++ + V+ +++S EDL +++ + S +++ ++ I+L N+ Sbjct: 307 KLLPAFQQMYTSLAQVKGNIASFDSIEEDLTASQE-IEDIKPASSAGKLSPKKLIKLDNI 365 Query: 358 SFNYGDS--PILRNVNLRIPRGGAIGIVGPSGSGKTTLLDIITGLQEADSGAIYADDRQF 415 SF Y D L L IP IG+VG SGSGK+T +D++ GL E SG++ D + Sbjct: 366 SFGYPDKEEKALVEFTLDIPVNQVIGLVGASGSGKSTAIDVLLGLIEPQSGSLIVDGEEI 425 Query: 416 NPFTSHSLEQMVGYVPQAITLLNESIAFNITF---EQEYDGQRLAKVLSIANLDAFIEGL 472 + + VG+VPQAI L + SI NI F +E D R+ + +A+LD ++ L Sbjct: 426 KGGKKRAWQNNVGFVPQAIFLADSSIRENIAFGIPPEEIDESRVTSAVKMAHLDELLKRL 485 Query: 473 PDGVMTLAGEDGLRLSGGQRQRIGIARALYRDPQLLVFDEATSALDTISEDEISKEIEQL 532 P+G+ T GE G++LSGGQRQRIGIARALY D ++LV DEATSALD I+E + I Sbjct: 486 PEGLSTRVGERGIQLSGGQRQRIGIARALYDDAEVLVLDEATSALDGITEKLVMDAIHDF 545 Query: 533 RKTISIVIVAHRLSTVVSCDVIYVMAHGYVVDAGSHQELLARCALYREM 581 +I+++AHRL+TV CD IY++ +G V+D G + +L++R ++EM Sbjct: 546 SGKKTIIMIAHRLTTVKQCDSIYILENGRVLDKGHYDDLVSRNKTFQEM 594 >gb|ADI84799.1| polysaccharide ABC transporter, ATP-binding/membrane protein, putative [Geobacter sulfurreducens KN400] Length = 606 Score = 260 bits (664), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 180/590 (30%), Positives = 312/590 (52%), Gaps = 33/590 (5%) Query: 9 FTFLSSFVGRKTGIALLLSVLLMSVLDLIGIAIIFPYLQIISLPGEF-AQKWLPV--GMR 65 + LS +K I +L + LM+ D++GIA I P++ ++S P + +W+ + Sbjct: 8 YKLLSLREKKKIYIQFIL-LFLMACFDMLGIASILPFMAVVSNPDIIQSNRWINMVYNFV 66 Query: 66 DISARAL-LFWLSGGLALFYIAKNFLQMRLTRYQFKSAAELTQRLTDDTISLVLGARYAT 124 D L LF L + + N +++ T K L L+ ++ + Y Sbjct: 67 DFDNNQLFLFSLGLVVLALLVVNNAIKVLYTWISLKYDNTLNFNLSKRLLASYMERPYEF 126 Query: 125 FQKFPASEIVG--IASSNTVHATLVFQALLQIINEIVFLSLLLLAIFKINFSLGCASVVM 182 F + +E++ ++ ++V A ++ + + N LL IF + F + +V Sbjct: 127 FLRTNTAEMIKNVLSEVSSVVAGVISPGMQALSNG-------LLCIFILVFLMVVDPIVA 179 Query: 183 IVLLTI--GLYFSVI----KRTQQLGYVQAVANRKRYELQFSIVTAIRDIKVMGLAVLFD 236 +V+ I G Y ++ R ++G Q AN +Y + I+D+KV+G F Sbjct: 180 VVIAAILGGAYSTIFLFVRHRLCKIGKDQVAANFMKYRATSEALAGIKDLKVLGREAEFH 239 Query: 237 RRSRKISESFADVTWKYGLNGVLPRLYIELFMLLAFVCAIVLLVLSGGDLKSMVPVLGVI 296 +R + + + + GL LPR +E + ++ + +G + +++P+L V Sbjct: 240 QRFVEHALRHSRLNTAVGLISQLPRFAMETIAFGGILLIVLYSLKAGREPSNVIPLLSVY 299 Query: 297 AITAIRAIPSFSRLIVGVNAVRYSLSSMEDL--ILTRDTLVQSAH-----VRSVDQITFE 349 A R +P+ +L ++ +R ++++++++ +L + + A ++ + + F Sbjct: 300 AFAGYRLMPALQQLFASISTIRVNMTALDNIYRLLVHERITSDADSPLIIMQEIQPLNFN 359 Query: 350 REIELRNVSFNY--GDSPILRNVNLRIPRGGAIGIVGPSGSGKTTLLDIITGLQEADSGA 407 + + L+N+SF Y + P + NVNL I ++G+VG +GSGKTT++DII GL SG Sbjct: 360 KSLTLKNISFAYRATNEPAVNNVNLTIIPNTSVGLVGTTGSGKTTMVDIILGLLNPISGK 419 Query: 408 IYADDRQFNPFTSHSLEQMVGYVPQAITLLNESIAFNITF---EQEYDGQRLAKVLSIAN 464 I D++ +GYVPQ I L +++IA NI F +++ D + + +IAN Sbjct: 420 IIVDNKVLLETDLARWRSNIGYVPQVIYLSDDTIAHNIAFGIPDRDIDMSAVLRAANIAN 479 Query: 465 LDAFIEG-LPDGVMTLAGEDGLRLSGGQRQRIGIARALYRDPQLLVFDEATSALDTISED 523 L FIE LPDG T GE G+RLSGGQRQRIGIARALYRDP++L+ DEATSALD I+E+ Sbjct: 480 LTNFIENELPDGFNTRIGERGVRLSGGQRQRIGIARALYRDPKVLIMDEATSALDGITEN 539 Query: 524 EISKEIEQLRKTISIVIVAHRLSTVVSCDVIYVMAHGYVVDAGSHQELLA 573 + + + +L +I+ VAHRL+TV CD+IY+M G ++D G++ +L+A Sbjct: 540 AVMEALRRLSGKKTIITVAHRLTTVKDCDIIYIMERGCIIDQGTYDDLMA 589 >gb|EDZ38461.1| Putative ABC transporter, ATP-binding protein [Leptospirillum sp. Group II '5-way CG'] Length = 609 Score = 259 bits (662), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 194/601 (32%), Positives = 324/601 (53%), Gaps = 33/601 (5%) Query: 3 KKHSQSFTFLSSFVGRKTGIALLLSVLLMSVLDLIGIAIIFPYLQIISLPGEFAQK-WLP 61 K Q++ LSS R+ +AL + +LL ++L++ GIA I P++ +++ PG WL Sbjct: 2 KSLRQAYAILSS-SHRRGLLALAVLMLLSAILEMAGIASIMPFMSMVADPGIVNHNHWLS 60 Query: 62 VGMRDI---SARALLFWLS----GGLALFYIAKNFLQMRLTRYQFKSAAELTQRLTDDTI 114 + S R+ + +L G L L + + R+ F + +L Q++ Sbjct: 61 ITYHRFGFESPRSFMIFLGCIVLGVLFLSNLIAALTVWSILRFSFTAGRDLAQKM----F 116 Query: 115 SLVLGARYATFQKFPASEIVG---IASSNTVHATLVFQALLQII-NEIVFLSLLLLAIFK 170 S+ L Y F +SE+V TV+ L+ LL I+ + LS+L+L +F Sbjct: 117 SVYLNHSYVFFLNRNSSELVQNTLFEMGRTVNNVLI--PLLTILARSTIALSILVL-LFS 173 Query: 171 INFSLGCASVVMIVLLTIGLYFSVIKRTQQLGYVQAVANRKRYELQFSIVTAIRDIKVMG 230 +N SL + ++ +YF V K + G + N +R ++ + I+DIK++G Sbjct: 174 VNPSLALVAGTILGGAYGLVYFGVRKTLARSGQEISRENARRTQVAYETFGGIKDIKILG 233 Query: 231 LAVLFDRRSRKISESFADVTWKYGLNGVLPRLYIELFMLLAFVCAIVLLVLSGGD-LKSM 289 F +K E +A + + + +LPR +E M + IVL +LS G+ L + Sbjct: 234 REKTFFNLFQKPVERYALLQAQTQMISLLPRYALET-MAFGGIIGIVLYLLSTGENLSTT 292 Query: 290 VPVLGVIAITAIRAIPSFSRLIVGVNAVRYSLSSMEDLILTRDTLVQSAH-----VRSVD 344 +P++ + A+ R +P+ ++ + VR+++S++E + +TL + + + Sbjct: 293 LPLISLYALAGYRLMPALQQIFANWSTVRFNISAVERIARDIETLPEKSQNPIVPPPATR 352 Query: 345 QITFEREIELRNVSFNYG--DSPILRNVNLRIPRGGAIGIVGPSGSGKTTLLDIITGLQE 402 +++ + IEL V+F+Y + +L ++L IP +IG+VG +GSGKTT LDI+ GL E Sbjct: 353 RLSVQNAIELDRVTFHYPGREEAVLDKLSLVIPARTSIGLVGSTGSGKTTTLDILLGLLE 412 Query: 403 ADSGAIYADDRQFNPFTSHSLEQMVGYVPQAITLLNESIAFNITF---EQEYDGQRLAKV 459 G+I D + N + +GYVPQ I LL++++ NI F E E D ++ + Sbjct: 413 PTEGSIKIDGQPVNRTNVREWQATIGYVPQQIMLLDDTVLKNIAFGIPEHEIDRDKVVQA 472 Query: 460 LSIANLDAFIE-GLPDGVMTLAGEDGLRLSGGQRQRIGIARALYRDPQLLVFDEATSALD 518 ++A+L F+ LP+G T GE G+RLSGGQRQRIGIARALY +P +LV DEATSALD Sbjct: 473 ATLAHLHDFVTTDLPEGYDTPIGERGVRLSGGQRQRIGIARALYHEPSVLVLDEATSALD 532 Query: 519 TISEDEISKEIEQLRKTISIVIVAHRLSTVVSCDVIYVMAHGYVVDAGSHQELLARCALY 578 I+E+ I + + L + ++++VAHRL+TV CD I V+ G V D+G+++ LL R + Sbjct: 533 NITENVIMEALNTLSRDKTVIMVAHRLTTVRECDTIVVLDRGRVADSGTYEALLDRNDFF 592 Query: 579 R 579 R Sbjct: 593 R 593 >ref|YP_743151.1| ABC transporter-like protein [Alkalilimnicola ehrlichii MLHE-1] gb|ABI57661.1| ABC transporter related protein [Alkalilimnicola ehrlichii MLHE-1] Length = 625 Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 185/584 (31%), Positives = 297/584 (50%), Gaps = 42/584 (7%) Query: 28 VLLMSVLDLIGIAIIFPYLQIIS----LPGE--FAQKWLPVGMRDISARALLFWLSGGLA 81 V+LMS+ ++ G+ I P++ ++ L G+ A + G+ D R LFWL G+ Sbjct: 50 VVLMSIAEIAGVISIGPFMALVGDMQQLQGDGLLADLYRASGLDD--PRDFLFWLGVGVL 107 Query: 82 LFYIAKNFLQM----RLTRYQFKSAAELTQRLTDDTISLVLGARYATFQKF------PAS 131 + M RL+ Y + AEL RL R+ Q + +S Sbjct: 108 FMLTVAAVISMITVWRLSLYGAQVGAELGSRLF----------RHYMHQDWLFHSSGSSS 157 Query: 132 EIVG-IASSNTVHATLVFQALLQIINEIVFLSLLLLAIFKINFSLGCASVVMIVLLTIGL 190 ++ IA + L+QI ++V SL+ LAIF N + + + L + L Sbjct: 158 QLTNQIAQEAQRITAAIINPLMQINAKLVMASLMALAIFLYNPGVALVGLAVFGLGYLLL 217 Query: 191 YFSVIKRTQQLGYVQAVANRKRYELQFSIVTAIRDIKVMGLAVLFDRRSRKISESFADVT 250 Y +V +R G A R+R++L I+D+ ++G RR + FA Sbjct: 218 YRTVRRRLTANGAAITQAQRQRFKLMGEGFGGIKDVLLLGRQDTITRRFENAANRFARAQ 277 Query: 251 WKYGLNGVLPRLYIELFMLLAFVCAIVLLVLSG-GDLKSMVPVLGVIAITAIRAIPSFSR 309 +PR +EL A + ++ L+ S G+L +++PVL V A+ + +P+F + Sbjct: 278 GTTMALSQVPRYAMELIAFGAVIFLVLYLLASHEGNLGTILPVLSVYALAGFKMLPAFQQ 337 Query: 310 LIVGVNAVRYSLSSMEDL--ILTRDTLVQSAHVRSVDQ-----ITFEREIELRNVSFNY- 361 + GV+ +R +L++ E + L T+ + R+ ++ + ++ IELR+++F Y Sbjct: 338 VYQGVSQIRGNLAAFEAVRDDLRASTMEGARASRNGEEDPDAHWSPKQSIELRDITFRYP 397 Query: 362 -GDSPILRNVNLRIPRGGAIGIVGPSGSGKTTLLDIITGLQEADSGAIYADDRQFNPFTS 420 P L +++ IP G +G+VG SGSGK+T +D++ GL ++G + D Sbjct: 398 GKQEPALNGLSMEIPANGVVGLVGASGSGKSTAIDLLLGLILPETGEVRIDGEPLTAENR 457 Query: 421 HSLEQMVGYVPQAITLLNESIAFNITF---EQEYDGQRLAKVLSIANLDAFIEGLPDGVM 477 + + VG+VPQ+I L + SI NI F + D ++ + ++A+LD + LPDG+ Sbjct: 458 RAWQNSVGFVPQSIFLADSSIRENIAFGLPPEAIDNDKVRRAATMAHLDELLAELPDGLD 517 Query: 478 TLAGEDGLRLSGGQRQRIGIARALYRDPQLLVFDEATSALDTISEDEISKEIEQLRKTIS 537 T GE G++LSGGQRQRIGIARALY D +LV DEATSALD I+E + I + Sbjct: 518 TRVGERGVQLSGGQRQRIGIARALYHDADVLVLDEATSALDGITEKLVMDAIHDFAGRKT 577 Query: 538 IVIVAHRLSTVVSCDVIYVMAHGYVVDAGSHQELLARCALYREM 581 I+++AHRL+TV CD IY+MA G V D GS EL R ++ M Sbjct: 578 IIMIAHRLATVKQCDTIYLMADGRVTDRGSFDELAERNITFKRM 621 >gb|EAY57469.1| putative ABC transporter, ATP-binding protein [Leptospirillum rubarum] Length = 609 Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 179/571 (31%), Positives = 307/571 (53%), Gaps = 30/571 (5%) Query: 32 SVLDLIGIAIIFPYLQIISLPGEFAQK-WLPVGMRDI---SARALLFWLS----GGLALF 83 ++ ++ GIA I P++ +++ PG WL + S R+ + +L G L L Sbjct: 30 AIFEMAGIASIMPFMSMVADPGIVDHNHWLSLTYHRFGFDSPRSFMIFLGFVVLGVLFLS 89 Query: 84 YIAKNFLQMRLTRYQFKSAAELTQRLTDDTISLVLGARYATFQKFPASEIVG---IASSN 140 + + R+ F + +L Q++ S+ L Y F +SE+V Sbjct: 90 NLIAALTVWSILRFSFTAGRDLAQKM----FSVYLNHPYVFFLNRNSSELVQNTLFEMGR 145 Query: 141 TVHATLVFQALLQII-NEIVFLSLLLLAIFKINFSLGCASVVMIVLLTIGLYFSVIKRTQ 199 TV+ L+ LL I+ + LS+L+L +F +N SL + ++ +YF V K Sbjct: 146 TVNNVLI--PLLTILARSTIALSILIL-LFSVNPSLALVAGTLLGGAYGLVYFGVRKTLA 202 Query: 200 QLGYVQAVANRKRYELQFSIVTAIRDIKVMGLAVLFDRRSRKISESFADVTWKYGLNGVL 259 + G + N +R ++ + I+DIK++G F +K E +A + + + +L Sbjct: 203 RSGQEISRENARRTQVAYETFGGIKDIKILGREKTFFDLFQKPVERYALLQAQTQMISLL 262 Query: 260 PRLYIELFMLLAFVCAIVLLVLSGGDLKSMVPVLGVIAITAIRAIPSFSRLIVGVNAVRY 319 PR +E + ++ L+ +G +L + +P++ + A+ R +P+ ++ + VR+ Sbjct: 263 PRYALETMAFGGIIGIVLYLLSTGENLSTTLPLISLYALAGYRLMPALQQIFANWSTVRF 322 Query: 320 SLSSMEDLILTRDTLVQSAHVRSVD-----QITFEREIELRNVSFNYG--DSPILRNVNL 372 ++S++E + + L ++A + V +++ + IEL V+F+Y + +L +++L Sbjct: 323 NISAVERISRDIEALPENAQKQEVPPPATRRLSLQTAIELDRVTFHYPGREEAVLDDLSL 382 Query: 373 RIPRGGAIGIVGPSGSGKTTLLDIITGLQEADSGAIYADDRQFNPFTSHSLEQMVGYVPQ 432 IP +IG+VG +GSGKTT LDI+ GL E G++ D + N + +GYVPQ Sbjct: 383 VIPARTSIGLVGSTGSGKTTTLDILLGLLEPTGGSLKIDGQPVNRTNVRQWQATIGYVPQ 442 Query: 433 AITLLNESIAFNITF---EQEYDGQRLAKVLSIANLDAFIEG-LPDGVMTLAGEDGLRLS 488 I LL++++ NI F EQE D ++ + ++A+L F+ L +G T GE G+RLS Sbjct: 443 QIMLLDDTVLKNIAFGIPEQEIDRDKVVQAATLAHLHDFVTSDLREGYDTPIGERGVRLS 502 Query: 489 GGQRQRIGIARALYRDPQLLVFDEATSALDTISEDEISKEIEQLRKTISIVIVAHRLSTV 548 GGQRQRIGIARALY +P +LV DEATSALD I+E+ I + + L + ++++VAHRL+TV Sbjct: 503 GGQRQRIGIARALYHEPSVLVLDEATSALDNITENVIMEALNTLARDKTVIMVAHRLTTV 562 Query: 549 VSCDVIYVMAHGYVVDAGSHQELLARCALYR 579 CD I V+ G VVD+G++ LL R +R Sbjct: 563 RECDTIVVLDRGRVVDSGTYDALLERNDFFR 593