BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0140.p (232 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773897.1| transcription regulator protein [Herbaspiril... 338 3e-91 ref|YP_004751456.1| hypothetical protein CFU_0799 [Collimonas fu... 284 6e-75 ref|YP_001354640.1| transcriptional regulator [Janthinobacterium... 278 3e-73 ref|YP_001100979.1| hypothetical protein HEAR2740 [Herminiimonas... 276 1e-72 ref|ZP_08273848.1| YqgE [Oxalobacteraceae bacterium IMCC9480] >g... 273 2e-71 >ref|YP_003773897.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ61989.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 193 Score = 338 bits (867), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 162/192 (84%), Positives = 179/192 (93%) Query: 41 ELDLTDHFLIAMPSMLDPVFGGTVVYLCEHNQNGALGVVINKPTDMTMDVLFDRINLKLE 100 ELDLT+HFLIAMPSMLDP+FGGTVVYLCEHN NGALGVVINKPTDMTMDVLFDRINLKLE Sbjct: 2 ELDLTNHFLIAMPSMLDPIFGGTVVYLCEHNHNGALGVVINKPTDMTMDVLFDRINLKLE 61 Query: 101 IIHDTPEAKPGLYRSQVMFGGPVQVERGFVLHSAMDQFSSTLQVTEGISLTTSKDVLEAV 160 I DTP+A P LYR VMFGGPVQVERGFVLHS +++SSTLQVT+ ++LTTSKDVLEAV Sbjct: 62 IQPDTPDAMPELYRRPVMFGGPVQVERGFVLHSTSEKYSSTLQVTDEVALTTSKDVLEAV 121 Query: 161 AHGDGPEQVLVSLGCSGWSAGQLEEELGRNGWLTVKADPAIIFDLPVEQRFTAALALLGI 220 AHG+GP++VLV+LGCSGWS GQLE E+GRNGWLTVKADP+IIF+LPVE+RFTAALALLGI Sbjct: 122 AHGNGPDRVLVTLGCSGWSPGQLEGEIGRNGWLTVKADPSIIFELPVEERFTAALALLGI 181 Query: 221 DPVMLSGDFGRA 232 DPVMLSGD GRA Sbjct: 182 DPVMLSGDAGRA 193 >ref|YP_004751456.1| hypothetical protein CFU_0799 [Collimonas fungivorans Ter331] gb|AEK60633.1| UPF0301 protein yqgE [Collimonas fungivorans Ter331] Length = 244 Score = 284 bits (727), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 144/219 (65%), Positives = 166/219 (75%), Gaps = 16/219 (7%) Query: 23 PESSDIIASQEKAAPLKAELDLTDHFLIAMPSMLDPVFGGTVVYLCEHNQNGALGVVINK 82 P+ S S KA L+LT+HFLIAMPSMLDPVFGGTVVYLCEHN NGALGVVINK Sbjct: 33 PDDSPARKSSAKAGADSPPLNLTNHFLIAMPSMLDPVFGGTVVYLCEHNANGALGVVINK 92 Query: 83 PTDMTMDVLFDRINLKLEIIHDTPEAKPGL---------YRSQVMFGGPVQVERGFVLHS 133 PTDMTM VLFDRI+L+LEI PGL VMFGGPVQVERGFVLH+ Sbjct: 93 PTDMTMQVLFDRIDLELEI-------SPGLGSLEFGDPIAERPVMFGGPVQVERGFVLHA 145 Query: 134 AMDQFSSTLQVTEGISLTTSKDVLEAVAHGDGPEQVLVSLGCSGWSAGQLEEELGRNGWL 193 + +SSTL+VT+ I++TTSKDVLE VAHG GP+++LVSLGCSGWSAGQLE E+ NGWL Sbjct: 146 PIKNYSSTLKVTDQIAMTTSKDVLEEVAHGSGPQRILVSLGCSGWSAGQLESEIVHNGWL 205 Query: 194 TVKADPAIIFDLPVEQRFTAALALLGIDPVMLSGDFGRA 232 TV ADPAIIF+LP+ +RF AA+ LLGI P ML+ + GRA Sbjct: 206 TVAADPAIIFELPIAERFAAAVNLLGISPYMLTAESGRA 244 >ref|YP_001354640.1| transcriptional regulator [Janthinobacterium sp. Marseille] gb|ABR89794.1| transcriptional regulator [Janthinobacterium sp. Marseille] Length = 221 Score = 278 bits (712), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 140/209 (66%), Positives = 168/209 (80%), Gaps = 6/209 (2%) Query: 24 ESSDIIASQEKAAPLKAELDLTDHFLIAMPSMLDPVFGGTVVYLCEHNQNGALGVVINKP 83 ES D A+ + P + L+L DHFLIAMPSMLDPVFGGTVVYLCEHN NGALGV+INK Sbjct: 19 ESLDFSAAPD--TPPRESLNLADHFLIAMPSMLDPVFGGTVVYLCEHNANGALGVIINKA 76 Query: 84 TDMTMDVLFDRINLKLEIIHDTPEAKPGLYRSQVMFGGPVQVERGFVLHSAMDQFSSTLQ 143 TDMT+DVL +RI+L LEI PE L R+ V++GGPVQ +RGFVLH+ FSSTL Sbjct: 77 TDMTVDVLLNRIDLTLEI---APELS-ALDRAPVLYGGPVQADRGFVLHAPRGDFSSTLP 132 Query: 144 VTEGISLTTSKDVLEAVAHGDGPEQVLVSLGCSGWSAGQLEEELGRNGWLTVKADPAIIF 203 VTE ISLTTSKD+L AVA G GP+++LVSLGC+GW AGQLE+E+ RNGWLTV+ADPA++F Sbjct: 133 VTEEISLTTSKDILAAVALGSGPQRMLVSLGCAGWGAGQLEDEITRNGWLTVRADPAVLF 192 Query: 204 DLPVEQRFTAALALLGIDPVMLSGDFGRA 232 D+P+EQRF AA+ LLGIDP+MLSG+ G A Sbjct: 193 DMPLEQRFVAAIKLLGIDPMMLSGEAGHA 221 >ref|YP_001100979.1| hypothetical protein HEAR2740 [Herminiimonas arsenicoxydans] emb|CAL62858.1| Conserved hypothetical protein, putative transcriptional regulator [Herminiimonas arsenicoxydans] Length = 225 Score = 276 bits (707), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 140/211 (66%), Positives = 167/211 (79%), Gaps = 6/211 (2%) Query: 24 ESSDIIASQEKAAPL--KAELDLTDHFLIAMPSMLDPVFGGTVVYLCEHNQNGALGVVIN 81 ES D A+ ++++ + EL+L DHFLIAMPSMLDPVFGG VVYLCEHN NGALGV+IN Sbjct: 19 ESLDFSATPDESSNTASRNELNLADHFLIAMPSMLDPVFGGAVVYLCEHNANGALGVIIN 78 Query: 82 KPTDMTMDVLFDRINLKLEIIHDTPEAKPGLYRSQVMFGGPVQVERGFVLHSAMDQFSST 141 KPTDMT+ VL RI+LKLEI D K L ++ VM+GGPVQ +RGFVLH+ FSST Sbjct: 79 KPTDMTVSVLLSRIDLKLEIAPD----KLPLEKTLVMYGGPVQADRGFVLHAPRGNFSST 134 Query: 142 LQVTEGISLTTSKDVLEAVAHGDGPEQVLVSLGCSGWSAGQLEEELGRNGWLTVKADPAI 201 L V I+LTTSKD+LEAVA G GP+++LVSLGCSGW AGQLE+E+ RNGWLTV+ADP I Sbjct: 135 LPVAGDIALTTSKDILEAVAMGAGPQRMLVSLGCSGWGAGQLEDEIVRNGWLTVRADPDI 194 Query: 202 IFDLPVEQRFTAALALLGIDPVMLSGDFGRA 232 +FDLP+EQRF AAL LLGIDP+MLS + G A Sbjct: 195 MFDLPLEQRFVAALKLLGIDPMMLSSEAGHA 225 >ref|ZP_08273848.1| YqgE [Oxalobacteraceae bacterium IMCC9480] gb|EGF32684.1| YqgE [Oxalobacteraceae bacterium IMCC9480] Length = 219 Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 140/219 (63%), Positives = 164/219 (74%), Gaps = 6/219 (2%) Query: 14 TPSDAAALAPESSDIIASQEKAAPLKAELDLTDHFLIAMPSMLDPVFGGTVVYLCEHNQN 73 TP A P + P +DLT+HFLIAMP+M DPVFGGTV+YLCEHN Sbjct: 7 TPPKTAGTGPHQDPAGLADIDGVPFG--MDLTNHFLIAMPAMADPVFGGTVIYLCEHNAR 64 Query: 74 GALGVVINKPTDMTMDVLFDRINLKLEIIHDTPEAKPGLYRSQVMFGGPVQVERGFVLHS 133 GALGV+INKPTDMT+ VLF+R++L LEI P P L VMFGGPVQ+ERGFVLH+ Sbjct: 65 GALGVIINKPTDMTLQVLFERVDLTLEI---NPR-HPTLPDHPVMFGGPVQLERGFVLHA 120 Query: 134 AMDQFSSTLQVTEGISLTTSKDVLEAVAHGDGPEQVLVSLGCSGWSAGQLEEELGRNGWL 193 FSS ++VT+ I+LTTSKDVLEAVA G GPE++LV+LGCSGWSAGQLE+E+ RNGWL Sbjct: 121 PPGAFSSMMKVTDDIALTTSKDVLEAVASGQGPERLLVTLGCSGWSAGQLEDEIIRNGWL 180 Query: 194 TVKADPAIIFDLPVEQRFTAALALLGIDPVMLSGDFGRA 232 TV ADPA+IFDLPVEQRFTAA+ LLGIDP ML+ G A Sbjct: 181 TVAADPAVIFDLPVEQRFTAAIRLLGIDPNMLNAGAGHA 219