BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0137.p (294 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773894.1| nitrate/sulfonate/bicarbonate ABC transporte... 449 e-124 ref|YP_001749452.1| ABC transporter-like protein [Pseudomonas pu... 368 e-100 ref|NP_745355.1| ABC transporter ATP-binding protein [Pseudomona... 368 e-100 ref|YP_559004.1| ABC nitrate/sulfonate/bicarbonate transporter, ... 367 2e-99 gb|ADR60167.1| ABC transporter, ATP-binding protein [Pseudomonas... 366 3e-99 >ref|YP_003773894.1| nitrate/sulfonate/bicarbonate ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ61986.1| ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 278 Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust. Identities = 222/266 (83%), Positives = 237/266 (89%), Gaps = 6/266 (2%) Query: 28 VLSAQRVEKTYRNGTRALDEVRLDIRRGEFVSLLGPSGCGKSTLLKMFAGLEEPSHGHIR 87 VLSAQRVEKTYRNGT ALDEVRLDI RGEFVSLLGPSGCGKSTLLKMFAGLEEPSHGHIR Sbjct: 19 VLSAQRVEKTYRNGTHALDEVRLDIGRGEFVSLLGPSGCGKSTLLKMFAGLEEPSHGHIR 78 Query: 88 WWGKNLATVGTPDRTLAMVFQEATLMPWASVEQNVRLPLDLKHMPRADSDVRVQDSLKLV 147 WWG NLATVGTP+RTLAMVFQEATLMPWA+VEQNVRLPLDL+H+PRA +D RV SLK V Sbjct: 79 WWGGNLATVGTPERTLAMVFQEATLMPWATVEQNVRLPLDLRHVPRAQADARVAASLKRV 138 Query: 148 GLDRFHDAYPRELSGGMQMRASIARALATRPNLLLMDEPFGALDEFTRNKLDADLRKIWS 207 GL+ FH PRELSGGMQMRASIARALAT PNLLLMDEPFGALDEFTRNKLDADLR IWS Sbjct: 139 GLESFHAVLPRELSGGMQMRASIARALATSPNLLLMDEPFGALDEFTRNKLDADLRDIWS 198 Query: 208 QQDLTVVFVTHSIYEAVYLSSRVVVMAARPGRVIADVPIEAPGAGGMRDDAFRISPEFMG 267 +QDLTVVFVTHSIYEAV+LSSRV+VMAARPGRVIADV I+APG RD+AFR+S FM Sbjct: 199 RQDLTVVFVTHSIYEAVFLSSRVIVMAARPGRVIADVAIDAPGP---RDEAFRMSAPFMQ 255 Query: 268 YCKILSDYLTLANQENQEGGAHDSAH 293 YCK LSDYLTLA NQ+G H++ H Sbjct: 256 YCKTLSDYLTLA---NQQGDGHEAQH 278 >ref|YP_001749452.1| ABC transporter-like protein [Pseudomonas putida W619] gb|ACA73083.1| ABC transporter related [Pseudomonas putida W619] Length = 284 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 186/262 (70%), Positives = 209/262 (79%), Gaps = 7/262 (2%) Query: 25 TDAVLSAQRVEKTYRNGTRALDEVRLDIRRGEFVSLLGPSGCGKSTLLKMFAGLEEPSHG 84 +D L A +VEKTY NGT AL V+L I+RGEFVSLLGPSGCGKSTLLKMFAGLE+PS G Sbjct: 24 SDTPLFANQVEKTYSNGTVALHRVKLAIQRGEFVSLLGPSGCGKSTLLKMFAGLEQPSAG 83 Query: 85 HIRWWGKNLA----TVGTPDRTLAMVFQEATLMPWASVEQNVRLPLDLKHMPRADSDVRV 140 H+RWWGK+ R+LAMVFQEATLMPWA V+ NVRLPLDL MP+A S +V Sbjct: 84 HVRWWGKDAPGSDPLASGAGRSLAMVFQEATLMPWARVQDNVRLPLDLVGMPKAHSQPKV 143 Query: 141 QDSLKLVGLDRFHDAYPRELSGGMQMRASIARALATRPNLLLMDEPFGALDEFTRNKLDA 200 Q +L+LVGL F AYPRELSGGMQMRASIARALAT PNLLLMDEPFGALDEFTRNKLD+ Sbjct: 144 QAALELVGLGAFGQAYPRELSGGMQMRASIARALATEPNLLLMDEPFGALDEFTRNKLDS 203 Query: 201 DLRKIWSQQDLTVVFVTHSIYEAVYLSSRVVVMAARPGRVIADVPIEAPGAGGMRDDAFR 260 DLR++W+Q+DLTVVFVTHSI+EAVYLSSRVVVM ARPGRVIADVPI+ P RD+A+R Sbjct: 204 DLRQLWAQRDLTVVFVTHSIFEAVYLSSRVVVMGARPGRVIADVPIDGPLE---RDEAYR 260 Query: 261 ISPEFMGYCKILSDYLTLANQE 282 SP F+ C LS L AN E Sbjct: 261 TSPAFIAQCAHLSRLLAQANGE 282 >ref|NP_745355.1| ABC transporter ATP-binding protein [Pseudomonas putida KT2440] gb|AAN68819.1|AE016514_8 ABC transporter, ATP-binding protein [Pseudomonas putida KT2440] Length = 282 Score = 368 bits (944), Expect = e-100, Method: Compositional matrix adjust. Identities = 184/260 (70%), Positives = 207/260 (79%), Gaps = 7/260 (2%) Query: 25 TDAVLSAQRVEKTYRNGTRALDEVRLDIRRGEFVSLLGPSGCGKSTLLKMFAGLEEPSHG 84 D L A +VEKTY NGT AL V+L I RGEFVSLLGPSGCGKSTLLKMFAGLE+PS G Sbjct: 22 VDTPLFANQVEKTYSNGTHALSRVKLAIERGEFVSLLGPSGCGKSTLLKMFAGLEQPSAG 81 Query: 85 HIRWWGKNLATV----GTPDRTLAMVFQEATLMPWASVEQNVRLPLDLKHMPRADSDVRV 140 H+RWWGK+ GTP R+LAMVFQEATLMPWA V NVRLPLDL P+A S ++V Sbjct: 82 HVRWWGKDAPGTDHHAGTPGRSLAMVFQEATLMPWAKVHDNVRLPLDLAGAPKAQSQLKV 141 Query: 141 QDSLKLVGLDRFHDAYPRELSGGMQMRASIARALATRPNLLLMDEPFGALDEFTRNKLDA 200 Q +L+LVGL +F D YPRELSGGMQMRASIARALAT PNLLLMDEPFGALDEFTRNKLD+ Sbjct: 142 QAALELVGLGKFGDVYPRELSGGMQMRASIARALATEPNLLLMDEPFGALDEFTRNKLDS 201 Query: 201 DLRKIWSQQDLTVVFVTHSIYEAVYLSSRVVVMAARPGRVIADVPIEAPGAGGMRDDAFR 260 DLR++W ++DLTVVFVTHSI+EAVYLSSRV+VM ARPGRVIADV I+ P RD+A+R Sbjct: 202 DLRQLWLKRDLTVVFVTHSIFEAVYLSSRVIVMGARPGRVIADVIIDGPLE---RDEAYR 258 Query: 261 ISPEFMGYCKILSDYLTLAN 280 SP F+ C LS L AN Sbjct: 259 TSPAFIEQCAHLSRLLAQAN 278 >ref|YP_559004.1| ABC nitrate/sulfonate/bicarbonate transporter, ATPase subunit [Burkholderia xenovorans LB400] gb|ABE30952.1| ABC nitrate/sulfonate/bicarbonate transporter, ATPase subunit [Burkholderia xenovorans LB400] Length = 277 Score = 367 bits (941), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 183/282 (64%), Positives = 222/282 (78%), Gaps = 9/282 (3%) Query: 11 LAAWEQGVADSAAVTDAVLSAQRVEKTYRNGTRALDEVRLDIRRGEFVSLLGPSGCGKST 70 +A E AD+AA + LS QRV+K Y NGT AL++VRL I GEFVSLLGPSGCGKST Sbjct: 1 MATIEAFTADAAAPS---LSVQRVDKRYPNGTIALEDVRLAIEPGEFVSLLGPSGCGKST 57 Query: 71 LLKMFAGLEEPSHGHIRWWGKNLATVGTPDRTLAMVFQEATLMPWASVEQNVRLPLDLKH 130 LLKMFAG+E P+HGH+RWWG+ TVG+P R ++MVFQEATLMPWA+V NVRLPLDL H Sbjct: 58 LLKMFAGIETPTHGHMRWWGQPFGTVGSPGRRMSMVFQEATLMPWATVADNVRLPLDLAH 117 Query: 131 MPRADSDVRVQDSLKLVGLDRFHDAYPRELSGGMQMRASIARALATRPNLLLMDEPFGAL 190 +PR ++D RV +L VGL RF +A PRELSGGMQMRAS+ARAL T P+LLL+DEPFGAL Sbjct: 118 VPRREADARVAAALDGVGLARFGNALPRELSGGMQMRASLARALVTEPDLLLLDEPFGAL 177 Query: 191 DEFTRNKLDADLRKIWSQQDLTVVFVTHSIYEAVYLSSRVVVMAARPGRVIADVPIEAPG 250 DEFTRN+LD+DLR +W ++ +TVVFVTHSIYEAVYLS RVVVM ARPGR+IADVPI+ P Sbjct: 178 DEFTRNRLDSDLRALWQRRGMTVVFVTHSIYEAVYLSGRVVVMQARPGRIIADVPIDGPL 237 Query: 251 AGGMRDDAFRISPEFMGYCKILSDYLTLANQ---ENQEGGAH 289 RD+A+R+S FM +CK LS+ +T A++ N+E G Sbjct: 238 K---RDEAYRVSAPFMQHCKTLSELITDAHRASFANEETGVQ 276 >gb|ADR60167.1| ABC transporter, ATP-binding protein [Pseudomonas putida BIRD-1] Length = 282 Score = 366 bits (939), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 184/259 (71%), Positives = 205/259 (79%), Gaps = 7/259 (2%) Query: 26 DAVLSAQRVEKTYRNGTRALDEVRLDIRRGEFVSLLGPSGCGKSTLLKMFAGLEEPSHGH 85 D L A +VEKTY NGT AL V+L I RGEFVSLLGPSGCGKSTLLKMFAGLE+PS GH Sbjct: 23 DTPLFANQVEKTYSNGTHALSRVKLAIERGEFVSLLGPSGCGKSTLLKMFAGLEQPSAGH 82 Query: 86 IRWWGKNLATV----GTPDRTLAMVFQEATLMPWASVEQNVRLPLDLKHMPRADSDVRVQ 141 +RWWGK+ GTP R+LAMVFQEATLMPWA V NVRLPLDL P+A S +VQ Sbjct: 83 VRWWGKDAPGTDHHAGTPGRSLAMVFQEATLMPWAKVHDNVRLPLDLAGAPKAQSQHKVQ 142 Query: 142 DSLKLVGLDRFHDAYPRELSGGMQMRASIARALATRPNLLLMDEPFGALDEFTRNKLDAD 201 +L+LVGL +F D YPRELSGGMQMRASIARALAT PNLLLMDEPFGALDEFTRNKLD+D Sbjct: 143 AALELVGLGKFGDVYPRELSGGMQMRASIARALATEPNLLLMDEPFGALDEFTRNKLDSD 202 Query: 202 LRKIWSQQDLTVVFVTHSIYEAVYLSSRVVVMAARPGRVIADVPIEAPGAGGMRDDAFRI 261 LR++W Q+DLTVVFVTHSI+EAVYLSSRV+VM ARPGRVIADV I+ P RD+ +R Sbjct: 203 LRQLWLQRDLTVVFVTHSIFEAVYLSSRVIVMGARPGRVIADVIIDGPLE---RDETYRT 259 Query: 262 SPEFMGYCKILSDYLTLAN 280 SP F+ C LS L AN Sbjct: 260 SPAFIEQCAHLSRLLAQAN 278