BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0129.p (574 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001098626.1| DNA polymerase I (POL I) [Herminiimonas arse... 1021 0.0 emb|CAL60497.2| DNA polymerase I (POL I) [Herminiimonas arsenico... 1020 0.0 ref|YP_001352013.1| DNA polymerase I [Janthinobacterium sp. Mars... 1018 0.0 ref|ZP_08275792.1| DNA polymerase I [Oxalobacteraceae bacterium ... 1010 0.0 ref|YP_004751383.1| DNA polymerase I [Collimonas fungivorans Ter... 1009 0.0 >ref|YP_001098626.1| DNA polymerase I (POL I) [Herminiimonas arsenicoxydans] Length = 911 Score = 1021 bits (2639), Expect = 0.0, Method: Compositional matrix adjust. Identities = 480/574 (83%), Positives = 530/574 (92%) Query: 1 VDTETTSLVPMQAQLVGISLCCEAGRAAYIPVAHNYQDMPAQLPRELVLAKLKPWLEDDS 60 +DTETTSL PMQAQLVGISLCCE G AAYIPVAH YQD+P QL R VL KL+ WLEDDS Sbjct: 338 IDTETTSLEPMQAQLVGISLCCEPGVAAYIPVAHRYQDVPLQLSRASVLEKLRSWLEDDS 397 Query: 61 KPKLGQNLKYDSHIFANQGIQLRGIVHDTLLESYVFESHRTHDMDSLALRHLNRTTISYT 120 KPK+GQNLKYDSHIFAN G+ LRGIVHDTLL+SYVFESHR+HDMDSLALRHLNR T+++ Sbjct: 398 KPKVGQNLKYDSHIFANHGVTLRGIVHDTLLQSYVFESHRSHDMDSLALRHLNRKTMTFQ 457 Query: 121 DVCGKGASQICFDQVEIGRATEYAAEDADVTLALHQAMWPQVENDAKLRYIYEKIEVPTS 180 DVCGKGASQ+CFDQV+I RATEYAAEDAD+TL LHQ M+P V DA L ++YEKIE+PT+ Sbjct: 458 DVCGKGASQLCFDQVDIARATEYAAEDADITLQLHQRMFPHVAEDAGLSFVYEKIELPTA 517 Query: 181 VVLQKIERNGVLVDAAILATQSNELGKRMLEIEQQAYELAGQPFNLNSPKQLGEILFEKL 240 VVLQK+ERNGVL+D +LATQS+ELGKRMLEIEQQAYELAGQPFNL SPKQ+GEI FEK+ Sbjct: 518 VVLQKVERNGVLIDPGLLATQSHELGKRMLEIEQQAYELAGQPFNLGSPKQIGEIFFEKM 577 Query: 241 QLPVVKKTPSGTPSTDEEVLAKLAEDYPLPKILLDYRGLSKLKSTYTDKLPKMVDPTTGR 300 +LPVVKKTPSG+PSTDEEVL KLAEDYPLPK+LL+YRGLSKLKSTYTDKLPKM+DP TGR Sbjct: 578 KLPVVKKTPSGSPSTDEEVLQKLAEDYPLPKLLLEYRGLSKLKSTYTDKLPKMIDPATGR 637 Query: 301 VHTNYAQAVAVTGRLASNDPNLQNIPIRTAEGRRIREAFIAPPGSTIVSADYSQIELRIM 360 VHTNYAQAVAVTGRL+SNDPNLQNIPIR AEGRRIREAFIAPPGS IVSADYSQIELRIM Sbjct: 638 VHTNYAQAVAVTGRLSSNDPNLQNIPIRNAEGRRIREAFIAPPGSVIVSADYSQIELRIM 697 Query: 361 AHISGDANMLKAFADGEDIHRATASEIFGVGLADVTSEQRRYAKVINFGLIYGMSAFGLA 420 AHIS D NML+AFA+GEDIHRATA+EIFGV DV+SEQRRYAKVINFGLIYGMSAFGLA Sbjct: 698 AHISEDENMLRAFAEGEDIHRATAAEIFGVARGDVSSEQRRYAKVINFGLIYGMSAFGLA 757 Query: 421 GNLGIERSAAQMYIDKYFQRFSSVKQYMDDTRLEAKSQGYVETVFGRRLWLPEINSPNGP 480 GNLGIER+AAQ YI+KYF RFS VK+YMDDTRLEAK++GYV+TVFGRRLWLPEINSPNGP Sbjct: 758 GNLGIERAAAQSYIEKYFYRFSGVKRYMDDTRLEAKARGYVQTVFGRRLWLPEINSPNGP 817 Query: 481 RRQGAERAAINAPMQGTAADLIKLAMISVQGWIEQDGLQSKLIMQVHDELVMEVPDAELA 540 RRQGAERAAINAPMQGTAADLIKLAMI+VQ W+E + LQ+K+IMQVHDELV+EVP+ ELA Sbjct: 818 RRQGAERAAINAPMQGTAADLIKLAMIAVQDWLEAEKLQTKMIMQVHDELVLEVPETELA 877 Query: 541 LVREKLPELMKNVAELKVPLIAEVGAGKNWDQAH 574 LVR KLPELM+NVA+LKVPLIAEVG GKNWD+AH Sbjct: 878 LVRVKLPELMRNVAQLKVPLIAEVGVGKNWDEAH 911 >emb|CAL60497.2| DNA polymerase I (POL I) [Herminiimonas arsenicoxydans] Length = 917 Score = 1020 bits (2638), Expect = 0.0, Method: Compositional matrix adjust. Identities = 480/574 (83%), Positives = 530/574 (92%) Query: 1 VDTETTSLVPMQAQLVGISLCCEAGRAAYIPVAHNYQDMPAQLPRELVLAKLKPWLEDDS 60 +DTETTSL PMQAQLVGISLCCE G AAYIPVAH YQD+P QL R VL KL+ WLEDDS Sbjct: 344 IDTETTSLEPMQAQLVGISLCCEPGVAAYIPVAHRYQDVPLQLSRASVLEKLRSWLEDDS 403 Query: 61 KPKLGQNLKYDSHIFANQGIQLRGIVHDTLLESYVFESHRTHDMDSLALRHLNRTTISYT 120 KPK+GQNLKYDSHIFAN G+ LRGIVHDTLL+SYVFESHR+HDMDSLALRHLNR T+++ Sbjct: 404 KPKVGQNLKYDSHIFANHGVTLRGIVHDTLLQSYVFESHRSHDMDSLALRHLNRKTMTFQ 463 Query: 121 DVCGKGASQICFDQVEIGRATEYAAEDADVTLALHQAMWPQVENDAKLRYIYEKIEVPTS 180 DVCGKGASQ+CFDQV+I RATEYAAEDAD+TL LHQ M+P V DA L ++YEKIE+PT+ Sbjct: 464 DVCGKGASQLCFDQVDIARATEYAAEDADITLQLHQRMFPHVAEDAGLSFVYEKIELPTA 523 Query: 181 VVLQKIERNGVLVDAAILATQSNELGKRMLEIEQQAYELAGQPFNLNSPKQLGEILFEKL 240 VVLQK+ERNGVL+D +LATQS+ELGKRMLEIEQQAYELAGQPFNL SPKQ+GEI FEK+ Sbjct: 524 VVLQKVERNGVLIDPGLLATQSHELGKRMLEIEQQAYELAGQPFNLGSPKQIGEIFFEKM 583 Query: 241 QLPVVKKTPSGTPSTDEEVLAKLAEDYPLPKILLDYRGLSKLKSTYTDKLPKMVDPTTGR 300 +LPVVKKTPSG+PSTDEEVL KLAEDYPLPK+LL+YRGLSKLKSTYTDKLPKM+DP TGR Sbjct: 584 KLPVVKKTPSGSPSTDEEVLQKLAEDYPLPKLLLEYRGLSKLKSTYTDKLPKMIDPATGR 643 Query: 301 VHTNYAQAVAVTGRLASNDPNLQNIPIRTAEGRRIREAFIAPPGSTIVSADYSQIELRIM 360 VHTNYAQAVAVTGRL+SNDPNLQNIPIR AEGRRIREAFIAPPGS IVSADYSQIELRIM Sbjct: 644 VHTNYAQAVAVTGRLSSNDPNLQNIPIRNAEGRRIREAFIAPPGSVIVSADYSQIELRIM 703 Query: 361 AHISGDANMLKAFADGEDIHRATASEIFGVGLADVTSEQRRYAKVINFGLIYGMSAFGLA 420 AHIS D NML+AFA+GEDIHRATA+EIFGV DV+SEQRRYAKVINFGLIYGMSAFGLA Sbjct: 704 AHISEDENMLRAFAEGEDIHRATAAEIFGVARGDVSSEQRRYAKVINFGLIYGMSAFGLA 763 Query: 421 GNLGIERSAAQMYIDKYFQRFSSVKQYMDDTRLEAKSQGYVETVFGRRLWLPEINSPNGP 480 GNLGIER+AAQ YI+KYF RFS VK+YMDDTRLEAK++GYV+TVFGRRLWLPEINSPNGP Sbjct: 764 GNLGIERAAAQSYIEKYFYRFSGVKRYMDDTRLEAKARGYVQTVFGRRLWLPEINSPNGP 823 Query: 481 RRQGAERAAINAPMQGTAADLIKLAMISVQGWIEQDGLQSKLIMQVHDELVMEVPDAELA 540 RRQGAERAAINAPMQGTAADLIKLAMI+VQ W+E + LQ+K+IMQVHDELV+EVP+ ELA Sbjct: 824 RRQGAERAAINAPMQGTAADLIKLAMIAVQDWLEAEKLQTKMIMQVHDELVLEVPETELA 883 Query: 541 LVREKLPELMKNVAELKVPLIAEVGAGKNWDQAH 574 LVR KLPELM+NVA+LKVPLIAEVG GKNWD+AH Sbjct: 884 LVRVKLPELMRNVAQLKVPLIAEVGVGKNWDEAH 917 >ref|YP_001352013.1| DNA polymerase I [Janthinobacterium sp. Marseille] gb|ABR88976.1| DNA polymerase I [Janthinobacterium sp. Marseille] Length = 912 Score = 1018 bits (2633), Expect = 0.0, Method: Compositional matrix adjust. Identities = 483/574 (84%), Positives = 529/574 (92%) Query: 1 VDTETTSLVPMQAQLVGISLCCEAGRAAYIPVAHNYQDMPAQLPRELVLAKLKPWLEDDS 60 +DTETTSL+PMQAQLVGISLCCE G AAYIPVAH+YQD+P QL RELVL K+KPWLED S Sbjct: 339 IDTETTSLIPMQAQLVGISLCCEPGVAAYIPVAHHYQDVPQQLSRELVLEKMKPWLEDAS 398 Query: 61 KPKLGQNLKYDSHIFANQGIQLRGIVHDTLLESYVFESHRTHDMDSLALRHLNRTTISYT 120 K K+GQNLKYDSHIFAN G+ LRGIVHDTLLESYVFESHR+HDMDSLALRHLNR TI++ Sbjct: 399 KAKVGQNLKYDSHIFANHGVNLRGIVHDTLLESYVFESHRSHDMDSLALRHLNRKTITFQ 458 Query: 121 DVCGKGASQICFDQVEIGRATEYAAEDADVTLALHQAMWPQVENDAKLRYIYEKIEVPTS 180 +VCGKGASQI F+QVEIGRATEYAAEDAD+TL LHQ MWP V D L ++YEKIE+PT+ Sbjct: 459 EVCGKGASQIGFEQVEIGRATEYAAEDADITLQLHQRMWPNVAEDNGLTFVYEKIELPTA 518 Query: 181 VVLQKIERNGVLVDAAILATQSNELGKRMLEIEQQAYELAGQPFNLNSPKQLGEILFEKL 240 VVLQKIERNGVL+D +LA QSNELGKRMLEIEQ AYELA QPFNLNSPKQ+GEI FEKL Sbjct: 519 VVLQKIERNGVLIDPDLLAKQSNELGKRMLEIEQNAYELAEQPFNLNSPKQIGEIFFEKL 578 Query: 241 QLPVVKKTPSGTPSTDEEVLAKLAEDYPLPKILLDYRGLSKLKSTYTDKLPKMVDPTTGR 300 +LPVVKKTPSG+PSTDEEVL KLAEDYPLPK+LL+YRGLSKLKSTYTDKLPKM+DPTTGR Sbjct: 579 KLPVVKKTPSGSPSTDEEVLQKLAEDYPLPKVLLEYRGLSKLKSTYTDKLPKMIDPTTGR 638 Query: 301 VHTNYAQAVAVTGRLASNDPNLQNIPIRTAEGRRIREAFIAPPGSTIVSADYSQIELRIM 360 VHTNYAQAVAVTGRLASNDPNLQNIPIR AEGRRIREAFIA PG+ IVSADYSQIELRIM Sbjct: 639 VHTNYAQAVAVTGRLASNDPNLQNIPIRNAEGRRIREAFIAAPGNVIVSADYSQIELRIM 698 Query: 361 AHISGDANMLKAFADGEDIHRATASEIFGVGLADVTSEQRRYAKVINFGLIYGMSAFGLA 420 AHISGD NML+AFADGEDIHRATA+EIFGV V SEQRRYAKVINFGLIYGMSAFGLA Sbjct: 699 AHISGDENMLQAFADGEDIHRATAAEIFGVERRAVDSEQRRYAKVINFGLIYGMSAFGLA 758 Query: 421 GNLGIERSAAQMYIDKYFQRFSSVKQYMDDTRLEAKSQGYVETVFGRRLWLPEINSPNGP 480 GNLGIERSAAQ YI++YF RF+ VK+YMD+TRLEAK++GYV+TVFGRRLWLPEINSPNGP Sbjct: 759 GNLGIERSAAQSYIERYFHRFAGVKRYMDETRLEAKARGYVQTVFGRRLWLPEINSPNGP 818 Query: 481 RRQGAERAAINAPMQGTAADLIKLAMISVQGWIEQDGLQSKLIMQVHDELVMEVPDAELA 540 RRQGAERAAINAPMQGTAADLIKLAMI+VQGW+E + LQSK+IMQVHDELV+EVP+ EL Sbjct: 819 RRQGAERAAINAPMQGTAADLIKLAMIAVQGWLETEKLQSKMIMQVHDELVLEVPETELP 878 Query: 541 LVREKLPELMKNVAELKVPLIAEVGAGKNWDQAH 574 LVREKLPELM++VA+LKVPLIAEVG G NWD+AH Sbjct: 879 LVREKLPELMRHVAQLKVPLIAEVGVGNNWDKAH 912 >ref|ZP_08275792.1| DNA polymerase I [Oxalobacteraceae bacterium IMCC9480] gb|EGF30735.1| DNA polymerase I [Oxalobacteraceae bacterium IMCC9480] Length = 914 Score = 1010 bits (2612), Expect = 0.0, Method: Compositional matrix adjust. Identities = 477/574 (83%), Positives = 519/574 (90%) Query: 1 VDTETTSLVPMQAQLVGISLCCEAGRAAYIPVAHNYQDMPAQLPRELVLAKLKPWLEDDS 60 +DTETTSLVP+QAQLVGISLCCE G AAYIPVAH Y D P QL RELVL K++ WLED + Sbjct: 341 IDTETTSLVPLQAQLVGISLCCEPGVAAYIPVAHRYADAPVQLSRELVLGKMQAWLEDPA 400 Query: 61 KPKLGQNLKYDSHIFANQGIQLRGIVHDTLLESYVFESHRTHDMDSLALRHLNRTTISYT 120 K K+GQNLKYDSHIFAN GI LRGI HDT+LESYVFESHR+HDMDSLALRHL RTTI++ Sbjct: 401 KAKVGQNLKYDSHIFANHGITLRGIAHDTMLESYVFESHRSHDMDSLALRHLGRTTITFQ 460 Query: 121 DVCGKGASQICFDQVEIGRATEYAAEDADVTLALHQAMWPQVENDAKLRYIYEKIEVPTS 180 +VCGKGASQICFDQV+I RATEYAAEDAD+TL LHQAM PQV +D L ++YEKIEVPT+ Sbjct: 461 EVCGKGASQICFDQVDIARATEYAAEDADITLQLHQAMLPQVTSDEGLLFVYEKIEVPTA 520 Query: 181 VVLQKIERNGVLVDAAILATQSNELGKRMLEIEQQAYELAGQPFNLNSPKQLGEILFEKL 240 VVLQKIERNGVL+D IL QS+ELGKRMLEIE AYELAGQPFNLNSPKQ+GEI FEKL Sbjct: 521 VVLQKIERNGVLIDTGILQVQSHELGKRMLEIETSAYELAGQPFNLNSPKQIGEIFFEKL 580 Query: 241 QLPVVKKTPSGTPSTDEEVLAKLAEDYPLPKILLDYRGLSKLKSTYTDKLPKMVDPTTGR 300 QLPVVKKTPSG PSTDEEVLAKLAEDYPLPK+LL+YR LSKLKSTYTDKLPKM+DPTTGR Sbjct: 581 QLPVVKKTPSGAPSTDEEVLAKLAEDYPLPKVLLEYRSLSKLKSTYTDKLPKMIDPTTGR 640 Query: 301 VHTNYAQAVAVTGRLASNDPNLQNIPIRTAEGRRIREAFIAPPGSTIVSADYSQIELRIM 360 VHTNYAQ VAVTGRLASN+PNLQNIPIRTAEGRRIREAF+AP GS IVSADYSQIELRIM Sbjct: 641 VHTNYAQTVAVTGRLASNEPNLQNIPIRTAEGRRIREAFVAPAGSVIVSADYSQIELRIM 700 Query: 361 AHISGDANMLKAFADGEDIHRATASEIFGVGLADVTSEQRRYAKVINFGLIYGMSAFGLA 420 AH+SGDANML+AFADG DIHRATA+EIF G ADVT+EQRRYAKVINFGLIYGMSAFGLA Sbjct: 701 AHLSGDANMLRAFADGIDIHRATAAEIFSTGAADVTTEQRRYAKVINFGLIYGMSAFGLA 760 Query: 421 GNLGIERSAAQMYIDKYFQRFSSVKQYMDDTRLEAKSQGYVETVFGRRLWLPEINSPNGP 480 GNLGIER AAQ YIDKYF RFS VKQ+MD+TRL+AK+ GYVETVFGRRLWLPEINSPNGP Sbjct: 761 GNLGIERGAAQSYIDKYFARFSGVKQFMDETRLKAKAHGYVETVFGRRLWLPEINSPNGP 820 Query: 481 RRQGAERAAINAPMQGTAADLIKLAMISVQGWIEQDGLQSKLIMQVHDELVMEVPDAELA 540 RRQGAERAAINAPMQGTAADLIKL+M++VQGW+E DGL+S ++MQVHDELV+EVP EL Sbjct: 821 RRQGAERAAINAPMQGTAADLIKLSMVAVQGWLETDGLKSLMVMQVHDELVLEVPQEELE 880 Query: 541 LVREKLPELMKNVAELKVPLIAEVGAGKNWDQAH 574 LVR KLP LM VAELKVPL AEVG GKNWD+AH Sbjct: 881 LVRVKLPALMAGVAELKVPLTAEVGIGKNWDEAH 914 >ref|YP_004751383.1| DNA polymerase I [Collimonas fungivorans Ter331] gb|AEK60560.1| DNA polymerase I [Collimonas fungivorans Ter331] Length = 1165 Score = 1009 bits (2610), Expect = 0.0, Method: Compositional matrix adjust. Identities = 489/574 (85%), Positives = 532/574 (92%) Query: 1 VDTETTSLVPMQAQLVGISLCCEAGRAAYIPVAHNYQDMPAQLPRELVLAKLKPWLEDDS 60 VDTETTSL PM AQLVGISLCCE G AAYIPVAH YQD PAQLPRE VL K++ WLED+S Sbjct: 592 VDTETTSLDPMTAQLVGISLCCEVGVAAYIPVAHRYQDAPAQLPREFVLEKMRAWLEDES 651 Query: 61 KPKLGQNLKYDSHIFANQGIQLRGIVHDTLLESYVFESHRTHDMDSLALRHLNRTTISYT 120 KPK+GQNLKYDSHIFANQG+ LRGIVHDTLLESYVFESHR+HDMDSLALRHLN TI++ Sbjct: 652 KPKVGQNLKYDSHIFANQGVSLRGIVHDTLLESYVFESHRSHDMDSLALRHLNHQTITFQ 711 Query: 121 DVCGKGASQICFDQVEIGRATEYAAEDADVTLALHQAMWPQVENDAKLRYIYEKIEVPTS 180 +VCGKGASQI FD+VEIGRA EYAAEDAD+TL LH MWP + +DAKLR+IYEKIEVPTS Sbjct: 712 EVCGKGASQIGFDEVEIGRAAEYAAEDADITLQLHLTMWPHIADDAKLRFIYEKIEVPTS 771 Query: 181 VVLQKIERNGVLVDAAILATQSNELGKRMLEIEQQAYELAGQPFNLNSPKQLGEILFEKL 240 VVLQKIERNGVL+DA++LATQSNELGKRMLEIEQ AYELAGQPFNL+SPKQLGEILF+KL Sbjct: 772 VVLQKIERNGVLIDASLLATQSNELGKRMLEIEQLAYELAGQPFNLSSPKQLGEILFDKL 831 Query: 241 QLPVVKKTPSGTPSTDEEVLAKLAEDYPLPKILLDYRGLSKLKSTYTDKLPKMVDPTTGR 300 +LPVVKKTPSG+PSTDEEVL KLAEDYPLPK+LLDYR LSKLKSTYTDKLPKMV+P TGR Sbjct: 832 KLPVVKKTPSGSPSTDEEVLQKLAEDYPLPKVLLDYRSLSKLKSTYTDKLPKMVNPHTGR 891 Query: 301 VHTNYAQAVAVTGRLASNDPNLQNIPIRTAEGRRIREAFIAPPGSTIVSADYSQIELRIM 360 VHTNYAQAVAVTGRLASNDPNLQNIPIRTAEGRRIREAF+APP S IVSADYSQIELRIM Sbjct: 892 VHTNYAQAVAVTGRLASNDPNLQNIPIRTAEGRRIREAFVAPPDSVIVSADYSQIELRIM 951 Query: 361 AHISGDANMLKAFADGEDIHRATASEIFGVGLADVTSEQRRYAKVINFGLIYGMSAFGLA 420 AHISGD NML+AFA+G DIHRATA+EIFG A+VTSEQRRYAKVINFGLIYGMSAFGLA Sbjct: 952 AHISGDENMLRAFAEGVDIHRATAAEIFGTPAAEVTSEQRRYAKVINFGLIYGMSAFGLA 1011 Query: 421 GNLGIERSAAQMYIDKYFQRFSSVKQYMDDTRLEAKSQGYVETVFGRRLWLPEINSPNGP 480 GNLGIER+AAQMYI+KYF RF+ VKQ+MD TR+EAKSQGYVETVFGRRLWLPEINSPNG Sbjct: 1012 GNLGIERAAAQMYIEKYFMRFAGVKQFMDMTRVEAKSQGYVETVFGRRLWLPEINSPNGQ 1071 Query: 481 RRQGAERAAINAPMQGTAADLIKLAMISVQGWIEQDGLQSKLIMQVHDELVMEVPDAELA 540 RRQGAERAAINAPMQGTAADLIKL+MI+VQGWIE + L+SK++MQVHDELV+EVP ELA Sbjct: 1072 RRQGAERAAINAPMQGTAADLIKLSMIAVQGWIETERLKSKMVMQVHDELVLEVPQDELA 1131 Query: 541 LVREKLPELMKNVAELKVPLIAEVGAGKNWDQAH 574 LVRE+LP+LM VAELKVPLIAEVG GKNWD+AH Sbjct: 1132 LVRERLPQLMAGVAELKVPLIAEVGVGKNWDEAH 1165