BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0127.p (234 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773886.1| Rossmann fold nucleotide-binding protein [He... 422 e-116 ref|ZP_02376284.1| hypothetical protein BuboB_01082 [Burkholderi... 326 2e-87 ref|YP_001584791.1| hypothetical protein Bmul_4828 [Burkholderia... 324 8e-87 ref|ZP_03585315.1| conserved hypothetical protein TIGR00730 [Bur... 323 9e-87 ref|YP_001948096.1| predicted Rossmann fold nucleotide-binding p... 323 9e-87 >ref|YP_003773886.1| Rossmann fold nucleotide-binding protein [Herbaspirillum seropedicae SmR1] gb|ADJ61978.1| Rossmann fold nucleotide-binding protein [Herbaspirillum seropedicae SmR1] Length = 248 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 200/235 (85%), Positives = 223/235 (94%), Gaps = 1/235 (0%) Query: 1 VDDIERATAKKARESWHVLTIMAEFIESTERLSELRPAVSIFGSARTKPDDPHYALCVDI 60 V DIERATAKKARESWHVLTIMAEFIESTERLSELRPAVSIFGSAR +PD+PHY LCV+I Sbjct: 14 VGDIERATAKKARESWHVLTIMAEFIESTERLSELRPAVSIFGSARIRPDNPHYQLCVEI 73 Query: 61 ARRLSDAGFAVISGGGPGIMEAANKGAFDGASPSVGLNIELPHEQHGNGWQDISLSFRHF 120 AR +SDAG+AVISGGGPGIMEAANKGA++GASPSVGLNIELPHEQHGN WQDISLSFRHF Sbjct: 74 ARLISDAGYAVISGGGPGIMEAANKGAYEGASPSVGLNIELPHEQHGNAWQDISLSFRHF 133 Query: 121 FARKVAFVKYADAYVVLPGGFGTLDELTEALTLMQTGKSRLMPVILVGSKFWAGLMEWIR 180 FARKVAFVKYADAYVVLPGGFGTLDELTEALTLMQTGKSR+MPVILVGS+FWAGL++WI+ Sbjct: 134 FARKVAFVKYADAYVVLPGGFGTLDELTEALTLMQTGKSRMMPVILVGSQFWAGLVDWIK 193 Query: 181 TRLVDDGMISAKDLDLLQVIDDPAEVVVAVQKFYAARQKPADP-EDTERQTGMYL 234 TRLVDDGMIS KD++LLQVID+PAEV+ A+QKF+A + KPA+ ++ ERQ+GMYL Sbjct: 194 TRLVDDGMISPKDVNLLQVIDEPAEVLAAIQKFHAEKAKPAETQQEAERQSGMYL 248 >ref|ZP_02376284.1| hypothetical protein BuboB_01082 [Burkholderia ubonensis Bu] Length = 250 Score = 326 bits (836), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 154/215 (71%), Positives = 182/215 (84%) Query: 3 DIERATAKKARESWHVLTIMAEFIESTERLSELRPAVSIFGSARTKPDDPHYALCVDIAR 62 D ERATAKKAR SW + TIMAEFIE+TE LSE+RPAVSI+GSAR KPD PHY L V IAR Sbjct: 15 DQERATAKKARASWQMFTIMAEFIEATEYLSEIRPAVSIYGSARLKPDTPHYKLAVQIAR 74 Query: 63 RLSDAGFAVISGGGPGIMEAANKGAFDGASPSVGLNIELPHEQHGNGWQDISLSFRHFFA 122 +LSDAGFAVISGGGPGIMEAANKGA G +PSVGLNIELPHEQ GN +QDISL FRHFF Sbjct: 75 KLSDAGFAVISGGGPGIMEAANKGAHAGKAPSVGLNIELPHEQAGNHYQDISLRFRHFFT 134 Query: 123 RKVAFVKYADAYVVLPGGFGTLDELTEALTLMQTGKSRLMPVILVGSKFWAGLMEWIRTR 182 RKV FVK +DA +V+PGGFGTLDEL+E LTL+QT KSRL+P+ILVGS FW GL++W R + Sbjct: 135 RKVTFVKNSDAVIVMPGGFGTLDELSEVLTLIQTKKSRLVPIILVGSTFWQGLLQWFRDQ 194 Query: 183 LVDDGMISAKDLDLLQVIDDPAEVVVAVQKFYAAR 217 ++ +G+I+A+D++L+QVIDDP +V+ AV FY R Sbjct: 195 MIPNGLINAEDMNLMQVIDDPDQVLDAVLAFYEDR 229 >ref|YP_001584791.1| hypothetical protein Bmul_4828 [Burkholderia multivorans ATCC 17616] gb|ABX18499.1| conserved hypothetical protein [Burkholderia multivorans ATCC 17616] Length = 252 Score = 324 bits (830), Expect = 8e-87, Method: Compositional matrix adjust. Identities = 154/212 (72%), Positives = 180/212 (84%) Query: 3 DIERATAKKARESWHVLTIMAEFIESTERLSELRPAVSIFGSARTKPDDPHYALCVDIAR 62 D ERATAKKAR SW + TIMAEFIE+TE LSE+RPAVSI+GSAR KPD PHY L V IAR Sbjct: 15 DQERATAKKARASWQMFTIMAEFIEATEYLSEIRPAVSIYGSARLKPDTPHYKLAVQIAR 74 Query: 63 RLSDAGFAVISGGGPGIMEAANKGAFDGASPSVGLNIELPHEQHGNGWQDISLSFRHFFA 122 +LSDAGFAVISGGGPGIMEAANKGA G +PSVGLNIELPHEQ GN +QDISL FRHFF Sbjct: 75 KLSDAGFAVISGGGPGIMEAANKGAHAGKAPSVGLNIELPHEQAGNHYQDISLRFRHFFT 134 Query: 123 RKVAFVKYADAYVVLPGGFGTLDELTEALTLMQTGKSRLMPVILVGSKFWAGLMEWIRTR 182 RKV FVK +DA +V+PGGFGTLDEL+E LTL+QT KSRL+P+ILVGS+FW GL++W R + Sbjct: 135 RKVTFVKNSDAVIVMPGGFGTLDELSEVLTLIQTKKSRLVPIILVGSEFWKGLLQWFRDQ 194 Query: 183 LVDDGMISAKDLDLLQVIDDPAEVVVAVQKFY 214 L+ G+I+ +D+DL+QVIDDP +V+ AV FY Sbjct: 195 LIPMGLINPEDMDLMQVIDDPDQVLDAVLAFY 226 >ref|ZP_03585315.1| conserved hypothetical protein TIGR00730 [Burkholderia multivorans CGD1] gb|EED99906.1| conserved hypothetical protein TIGR00730 [Burkholderia multivorans CGD1] Length = 252 Score = 323 bits (829), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 154/212 (72%), Positives = 180/212 (84%) Query: 3 DIERATAKKARESWHVLTIMAEFIESTERLSELRPAVSIFGSARTKPDDPHYALCVDIAR 62 D ERATAKKAR SW + TIMAEFIE+TE LSE+RPAVSI+GSAR KPD PHY L V IAR Sbjct: 15 DQERATAKKARASWQMFTIMAEFIEATEYLSEIRPAVSIYGSARLKPDTPHYKLAVQIAR 74 Query: 63 RLSDAGFAVISGGGPGIMEAANKGAFDGASPSVGLNIELPHEQHGNGWQDISLSFRHFFA 122 +LSDAGFAVISGGGPGIMEAANKGA G +PSVGLNIELPHEQ GN +QDISL FRHFF Sbjct: 75 KLSDAGFAVISGGGPGIMEAANKGAHAGKAPSVGLNIELPHEQAGNHYQDISLRFRHFFT 134 Query: 123 RKVAFVKYADAYVVLPGGFGTLDELTEALTLMQTGKSRLMPVILVGSKFWAGLMEWIRTR 182 RKV FVK +DA +V+PGGFGTLDEL+E LTL+QT KSRL+P+ILVGS+FW GL++W R + Sbjct: 135 RKVTFVKNSDAVIVMPGGFGTLDELSEVLTLIQTKKSRLVPIILVGSEFWKGLLQWFRDQ 194 Query: 183 LVDDGMISAKDLDLLQVIDDPAEVVVAVQKFY 214 L+ G+I+ +D+DL+QVIDDP +V+ AV FY Sbjct: 195 LIPMGLINPEDMDLMQVIDDPDQVLDAVLAFY 226 >ref|YP_001948096.1| predicted Rossmann fold nucleotide-binding protein [Burkholderia multivorans ATCC 17616] dbj|BAG45560.1| predicted Rossmann fold nucleotide-binding protein [Burkholderia multivorans ATCC 17616] Length = 247 Score = 323 bits (829), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 154/212 (72%), Positives = 180/212 (84%) Query: 3 DIERATAKKARESWHVLTIMAEFIESTERLSELRPAVSIFGSARTKPDDPHYALCVDIAR 62 D ERATAKKAR SW + TIMAEFIE+TE LSE+RPAVSI+GSAR KPD PHY L V IAR Sbjct: 10 DQERATAKKARASWQMFTIMAEFIEATEYLSEIRPAVSIYGSARLKPDTPHYKLAVQIAR 69 Query: 63 RLSDAGFAVISGGGPGIMEAANKGAFDGASPSVGLNIELPHEQHGNGWQDISLSFRHFFA 122 +LSDAGFAVISGGGPGIMEAANKGA G +PSVGLNIELPHEQ GN +QDISL FRHFF Sbjct: 70 KLSDAGFAVISGGGPGIMEAANKGAHAGKAPSVGLNIELPHEQAGNHYQDISLRFRHFFT 129 Query: 123 RKVAFVKYADAYVVLPGGFGTLDELTEALTLMQTGKSRLMPVILVGSKFWAGLMEWIRTR 182 RKV FVK +DA +V+PGGFGTLDEL+E LTL+QT KSRL+P+ILVGS+FW GL++W R + Sbjct: 130 RKVTFVKNSDAVIVMPGGFGTLDELSEVLTLIQTKKSRLVPIILVGSEFWKGLLQWFRDQ 189 Query: 183 LVDDGMISAKDLDLLQVIDDPAEVVVAVQKFY 214 L+ G+I+ +D+DL+QVIDDP +V+ AV FY Sbjct: 190 LIPMGLINPEDMDLMQVIDDPDQVLDAVLAFY 221