BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0121.p (247 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004751757.1| ABC sugar transporter, periplasmic ligand bi... 345 3e-93 ref|YP_003773873.1| sugar ABC transporter periplasmic protein [H... 343 1e-92 ref|YP_003908075.1| extracellular solute-binding protein family ... 307 1e-81 ref|YP_004229369.1| sugar ABC transporter substrate-binding prot... 305 3e-81 ref|YP_572694.1| extracellular solute-binding protein [Chromohal... 305 3e-81 >ref|YP_004751757.1| ABC sugar transporter, periplasmic ligand binding protein [Collimonas fungivorans Ter331] gb|AEK60934.1| ABC sugar transporter, periplasmic ligand binding protein [Collimonas fungivorans Ter331] Length = 472 Score = 345 bits (886), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 165/246 (67%), Positives = 194/246 (78%) Query: 1 MALIGTMVNAHGGRWFDEKWQPQLDTPEWAQAVGLYVDLLRKYGPADAVQNGFNENLALF 60 MAL+GTMVN G RWFDEKWQPQL++PEW AV YVDLL KYGP A NGFNENL LF Sbjct: 227 MALVGTMVNTFGARWFDEKWQPQLNSPEWKNAVTTYVDLLHKYGPQGATSNGFNENLVLF 286 Query: 61 AAGKCAMWIDATVAAGTLYHGKNSKVFDKTAFVAAPTATTAKGAQWLWVWALAVPHSSNS 120 ++GKC M IDATVAAG +Y K SKV K AF +P A T KG+ WLW+W+LA+P SS S Sbjct: 287 SSGKCGMGIDATVAAGMIYSSKESKVVGKVAFAPSPVAVTPKGSHWLWIWSLAIPKSSKS 346 Query: 121 KEAAKKFAVWATSKEYIRLVAEKDGWGLAPPGTRESTYASVGYLRASPYADFVLNAIRSA 180 ++AAKKFA WATSKEY++LVA++ GWGL PPGTR STYAS Y +A+PY+DFVLNAI+SA Sbjct: 347 QDAAKKFAAWATSKEYVQLVAKEKGWGLVPPGTRMSTYASPEYKKAAPYSDFVLNAIQSA 406 Query: 181 DPDSPTLKPVPYVGIQLVTIPEFPSIGTFTGQAIARALAGRSSVEAALKTSQTITMRLMQ 240 D TL+ VPY GIQ VTIPEF S+GT GQAIA ALAG+S+V+AAL+TSQ R+M+ Sbjct: 407 DTKDATLQKVPYTGIQFVTIPEFQSLGTVVGQAIAGALAGKSTVDAALQTSQAQADRVMR 466 Query: 241 QGRYIK 246 QGRYIK Sbjct: 467 QGRYIK 472 >ref|YP_003773873.1| sugar ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ61965.1| ABC-type sugar transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 451 Score = 343 bits (881), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 163/246 (66%), Positives = 197/246 (80%) Query: 1 MALIGTMVNAHGGRWFDEKWQPQLDTPEWAQAVGLYVDLLRKYGPADAVQNGFNENLALF 60 MA+I TM NA GGRWFDE+WQPQL +PEW ++V YVDL+RKYGP A NGFNENL LF Sbjct: 206 MAIITTMANAWGGRWFDEQWQPQLSSPEWKKSVAFYVDLMRKYGPPGASSNGFNENLVLF 265 Query: 61 AAGKCAMWIDATVAAGTLYHGKNSKVFDKTAFVAAPTATTAKGAQWLWVWALAVPHSSNS 120 ++GKC MW+DATVAAG LYHGK+SKV DKTAF +P T KG+ WLW+W+LAVP SS S Sbjct: 266 SSGKCGMWVDATVAAGMLYHGKDSKVADKTAFAPSPMQVTDKGSHWLWIWSLAVPKSSKS 325 Query: 121 KEAAKKFAVWATSKEYIRLVAEKDGWGLAPPGTRESTYASVGYLRASPYADFVLNAIRSA 180 ++AAKKFA WATSKEYI LVA+ GW L PPGTR STYAS Y + SP++DFVL+AI++A Sbjct: 326 QDAAKKFAAWATSKEYINLVAKDSGWALVPPGTRNSTYASAEYKKVSPFSDFVLDAIQTA 385 Query: 181 DPDSPTLKPVPYVGIQLVTIPEFPSIGTFTGQAIARALAGRSSVEAALKTSQTITMRLMQ 240 D + PT+KPVPY G+Q TIPEF SIGT TGQAIA ALAG+++ +AAL +Q +R+M+ Sbjct: 386 DANKPTVKPVPYTGVQFATIPEFQSIGTVTGQAIAGALAGKTTSDAALDAAQAQAVRMMR 445 Query: 241 QGRYIK 246 QGRYIK Sbjct: 446 QGRYIK 451 >ref|YP_003908075.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1003] gb|ADN58784.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1003] Length = 440 Score = 307 bits (786), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 146/246 (59%), Positives = 176/246 (71%) Query: 1 MALIGTMVNAHGGRWFDEKWQPQLDTPEWAQAVGLYVDLLRKYGPADAVQNGFNENLALF 60 MA T+VN GGRWFDEKW QL +PEW +A+ YVDLL+K GP A NGFNENL L Sbjct: 195 MAYGTTVVNTFGGRWFDEKWHAQLTSPEWKKAITFYVDLLKKNGPPGASSNGFNENLTLM 254 Query: 61 AAGKCAMWIDATVAAGTLYHGKNSKVFDKTAFVAAPTATTAKGAQWLWVWALAVPHSSNS 120 ++GKCAMWIDATVAAG LY+ + S++ DK F AAP A T KG+ WLW WALA+P SS Sbjct: 255 SSGKCAMWIDATVAAGMLYNKQQSQIADKVGFAAAPVAVTPKGSHWLWAWALAIPKSSKQ 314 Query: 121 KEAAKKFAVWATSKEYIRLVAEKDGWGLAPPGTRESTYASVGYLRASPYADFVLNAIRSA 180 +AAKKF WATSK+YI LVA+ +GW PPGTR+STYA Y +A+P+ DFVL AI SA Sbjct: 315 ADAAKKFITWATSKQYIELVAKDEGWASVPPGTRQSTYARAEYKQAAPFGDFVLKAIESA 374 Query: 181 DPDSPTLKPVPYVGIQLVTIPEFPSIGTFTGQAIARALAGRSSVEAALKTSQTITMRLMQ 240 DPD PTLKPVPY G+Q V IPEF S GT GQ+I+ A+AG+ +V+ AL Q R ++ Sbjct: 375 DPDHPTLKPVPYTGVQFVGIPEFQSFGTVVGQSISGAIAGQMTVDQALAAGQATADRAVK 434 Query: 241 QGRYIK 246 Q Y K Sbjct: 435 QAGYQK 440 >ref|YP_004229369.1| sugar ABC transporter substrate-binding protein [Burkholderia sp. CCGE1001] gb|ADX56309.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1001] Length = 440 Score = 305 bits (782), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 145/246 (58%), Positives = 176/246 (71%) Query: 1 MALIGTMVNAHGGRWFDEKWQPQLDTPEWAQAVGLYVDLLRKYGPADAVQNGFNENLALF 60 MA T+VN GGRWFDEKW QL +PEW +A+ YVDLL+K GP A NGFNENL L Sbjct: 195 MAYGTTVVNTFGGRWFDEKWHAQLTSPEWKKAITFYVDLLKKDGPPGASSNGFNENLTLM 254 Query: 61 AAGKCAMWIDATVAAGTLYHGKNSKVFDKTAFVAAPTATTAKGAQWLWVWALAVPHSSNS 120 ++GKCAMWIDATVAAG LY+ + S++ DK F AAP T KG+ WLW WALA+P SS Sbjct: 255 SSGKCAMWIDATVAAGMLYNKQQSQIADKVGFAAAPVQVTPKGSHWLWAWALAIPKSSKQ 314 Query: 121 KEAAKKFAVWATSKEYIRLVAEKDGWGLAPPGTRESTYASVGYLRASPYADFVLNAIRSA 180 +AAKKF WATSK+YI LVA+ +GW PPGTR+STYA Y +A+P++DFVL AI +A Sbjct: 315 TDAAKKFITWATSKQYIELVAKDEGWASVPPGTRQSTYARAEYKQAAPFSDFVLKAIETA 374 Query: 181 DPDSPTLKPVPYVGIQLVTIPEFPSIGTFTGQAIARALAGRSSVEAALKTSQTITMRLMQ 240 DPD PTLKPVPY G+Q V IPEF S GT GQ+I+ A+AG+ SV+ AL Q R ++ Sbjct: 375 DPDHPTLKPVPYTGVQFVGIPEFQSFGTVVGQSISGAIAGQMSVDQALAAGQATADRAVK 434 Query: 241 QGRYIK 246 Q Y K Sbjct: 435 QAGYQK 440 >ref|YP_572694.1| extracellular solute-binding protein [Chromohalobacter salexigens DSM 3043] gb|ABE57995.1| mannitol-binding protein / sorbitol-binding protein [Chromohalobacter salexigens DSM 3043] Length = 436 Score = 305 bits (782), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 141/244 (57%), Positives = 176/244 (72%) Query: 1 MALIGTMVNAHGGRWFDEKWQPQLDTPEWAQAVGLYVDLLRKYGPADAVQNGFNENLALF 60 MA + T+VN GGRWFDE+W P++++PEW +AVG YVDL+ YGP A NGFNEN ALF Sbjct: 191 MAFVSTLVNTFGGRWFDEEWHPEINSPEWKEAVGFYVDLMNNYGPPGATSNGFNENQALF 250 Query: 61 AAGKCAMWIDATVAAGTLYHGKNSKVFDKTAFVAAPTATTAKGAQWLWVWALAVPHSSNS 120 ++GKC MW+DAT AAG LY+ S+V DK F AP A T KGA WLW W LA+P SS++ Sbjct: 251 SSGKCGMWVDATSAAGRLYNPDESQVADKLGFAPAPIAETPKGANWLWSWTLAIPASSDA 310 Query: 121 KEAAKKFAVWATSKEYIRLVAEKDGWGLAPPGTRESTYASVGYLRASPYADFVLNAIRSA 180 K+AA+ F WATS++YI LV E +GW PPGTRESTY + Y A+P+ADFVLNAI++A Sbjct: 311 KDAARTFITWATSQDYIELVGETEGWTSVPPGTRESTYENPKYQEAAPFADFVLNAIQTA 370 Query: 181 DPDSPTLKPVPYVGIQLVTIPEFPSIGTFTGQAIARALAGRSSVEAALKTSQTITMRLMQ 240 DP TLKP PY+G+Q V IPEF ++GT GQ I ALAG+ SV+AAL +Q R M+ Sbjct: 371 DPTDSTLKPSPYIGVQTVNIPEFQAVGTQVGQMIGAALAGQQSVDAALDQAQRSVDRTMR 430 Query: 241 QGRY 244 Q Y Sbjct: 431 QAGY 434