BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0114.p (271 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004751755.1| Various polyols ABC transporter permease 2 [... 477 e-133 ref|YP_003773875.1| sugar ABC transporter permease [Herbaspirill... 476 e-132 ref|YP_004361853.1| Putative ABC transporter permease protein [B... 415 e-114 ref|YP_002231908.1| putative ABC transporter permease [Burkholde... 415 e-114 ref|YP_001578896.1| binding-protein-dependent transport systems ... 414 e-114 >ref|YP_004751755.1| Various polyols ABC transporter permease 2 [Collimonas fungivorans Ter331] gb|AEK60932.1| Various polyols ABC transporter, permease component 2 [Collimonas fungivorans Ter331] Length = 271 Score = 477 bits (1228), Expect = e-133, Method: Compositional matrix adjust. Identities = 235/271 (86%), Positives = 256/271 (94%) Query: 1 MNDQKKSPLWVGLLAWTCAIILFFPIFWVAVTAFKTEHQAYMPSLIFMPTLDTFREVFER 60 M+ + K+ LW+GLLAW CAIILFFPIFWVA+TAFKTEHQAY+P+LIF PTL++F EV R Sbjct: 1 MSAKNKNRLWLGLLAWACAIILFFPIFWVAITAFKTEHQAYVPTLIFWPTLESFHEVMAR 60 Query: 61 SNYLAFVKNSMIVSLGSTLLSLLIAVPAAYSMAFFPTGRTQKLLLWMLSTKMMPAVGVLV 120 SNY+ FV NS+IVSLGST+LSLLIAVPAAY+MAFFPT RTQKLLLWMLSTKMMPAVGVL+ Sbjct: 61 SNYMNFVGNSLIVSLGSTILSLLIAVPAAYAMAFFPTARTQKLLLWMLSTKMMPAVGVLI 120 Query: 121 PIYLLAKNSGMLDSVTGLTLIYTLINLPIAVWMAFTYFNDVPKEILEAARIDGANAWQEM 180 PIYLLAKN+G+LD+VTGLT+IYTLINLPIAVWMAFTYFNDVPKEILEAARIDGANAWQEM Sbjct: 121 PIYLLAKNTGLLDTVTGLTIIYTLINLPIAVWMAFTYFNDVPKEILEAARIDGANAWQEM 180 Query: 181 LYLLLPTAMPGLASTALLLIILSWNEAFWSLNLTSVDAAPLTVFIASYSNPEGLFWAKLS 240 +YLLLPT+MPGL STALLLIILSWNEAFWS+NLTSV APLTVFIASYSNPEGLFWAKLS Sbjct: 181 VYLLLPTSMPGLVSTALLLIILSWNEAFWSINLTSVSGAPLTVFIASYSNPEGLFWAKLS 240 Query: 241 AASLLAIAPIMALGWLAQKQLVRGLTFGAVK 271 AASLLAIAPIM LGWLAQKQLVRGLTFGAVK Sbjct: 241 AASLLAIAPIMVLGWLAQKQLVRGLTFGAVK 271 >ref|YP_003773875.1| sugar ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ61967.1| ABC-type sugar transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 271 Score = 476 bits (1224), Expect = e-132, Method: Compositional matrix adjust. Identities = 243/271 (89%), Positives = 263/271 (97%) Query: 1 MNDQKKSPLWVGLLAWTCAIILFFPIFWVAVTAFKTEHQAYMPSLIFMPTLDTFREVFER 60 M+D KKSPLWV +L W CAI+LFFPIFWVAVTAFKTE QAY PSL+F+PTL+TFREVF R Sbjct: 1 MSDPKKSPLWVAVLGWACAIVLFFPIFWVAVTAFKTESQAYTPSLVFLPTLETFREVFSR 60 Query: 61 SNYLAFVKNSMIVSLGSTLLSLLIAVPAAYSMAFFPTGRTQKLLLWMLSTKMMPAVGVLV 120 S+YL +V+NS+IVSLGSTLLSLL+AVPAAYSMAFFPTGRTQKLLLWMLSTKMMPAVGVL+ Sbjct: 61 SHYLGYVQNSLIVSLGSTLLSLLLAVPAAYSMAFFPTGRTQKLLLWMLSTKMMPAVGVLI 120 Query: 121 PIYLLAKNSGMLDSVTGLTLIYTLINLPIAVWMAFTYFNDVPKEILEAARIDGANAWQEM 180 PIYL+AKN+G+LD+VTGLT+IYTLINLPIAVWMAFTYFNDVPKEILEAARIDGANAWQEM Sbjct: 121 PIYLMAKNTGLLDTVTGLTIIYTLINLPIAVWMAFTYFNDVPKEILEAARIDGANAWQEM 180 Query: 181 LYLLLPTAMPGLASTALLLIILSWNEAFWSLNLTSVDAAPLTVFIASYSNPEGLFWAKLS 240 +YLLLPTAMPGLASTALLL+ILSWNEAFWSLNLTSV+AAPLTVFIASYSNPEGLFWAKLS Sbjct: 181 IYLLLPTAMPGLASTALLLVILSWNEAFWSLNLTSVNAAPLTVFIASYSNPEGLFWAKLS 240 Query: 241 AASLLAIAPIMALGWLAQKQLVRGLTFGAVK 271 AASLLAIAPIMALGWLAQKQLVRGLTFGAVK Sbjct: 241 AASLLAIAPIMALGWLAQKQLVRGLTFGAVK 271 >ref|YP_004361853.1| Putative ABC transporter permease protein [Burkholderia gladioli BSR3] gb|AEA61897.1| Putative ABC transporter permease protein [Burkholderia gladioli BSR3] Length = 281 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 199/260 (76%), Positives = 236/260 (90%) Query: 12 GLLAWTCAIILFFPIFWVAVTAFKTEHQAYMPSLIFMPTLDTFREVFERSNYLAFVKNSM 71 G+LAW A++LFFPIFW+A+TAFKTE QAY SLIF PTLD+FREVF RSNY F NS+ Sbjct: 22 GVLAWLIALLLFFPIFWMAITAFKTEQQAYSMSLIFTPTLDSFREVFARSNYFGFAWNSI 81 Query: 72 IVSLGSTLLSLLIAVPAAYSMAFFPTGRTQKLLLWMLSTKMMPAVGVLVPIYLLAKNSGM 131 ++S+G T++ LL AVPAAY+MAFFPTGRTQK+LLWMLSTKMMP+VGVLVPIYLL KNSG+ Sbjct: 82 LISVGVTVVCLLFAVPAAYAMAFFPTGRTQKVLLWMLSTKMMPSVGVLVPIYLLWKNSGL 141 Query: 132 LDSVTGLTLIYTLINLPIAVWMAFTYFNDVPKEILEAARIDGANAWQEMLYLLLPTAMPG 191 LD+V+G+ +IYTLINLPIAVWM FTYF ++P++ILEA RIDGA WQE++YLL+P A+PG Sbjct: 142 LDTVSGVVIIYTLINLPIAVWMTFTYFTEIPRDILEAGRIDGATTWQEIVYLLMPMALPG 201 Query: 192 LASTALLLIILSWNEAFWSLNLTSVDAAPLTVFIASYSNPEGLFWAKLSAASLLAIAPIM 251 LAST+LLL+ILSWNEAFWS+NLTS +AAPLTVFIASYS+PEGLFWAKLSAASLLA+API+ Sbjct: 202 LASTSLLLVILSWNEAFWSINLTSSNAAPLTVFIASYSSPEGLFWAKLSAASLLAVAPIL 261 Query: 252 ALGWLAQKQLVRGLTFGAVK 271 +GWL+QKQLVRGLTFGAVK Sbjct: 262 IVGWLSQKQLVRGLTFGAVK 281 >ref|YP_002231908.1| putative ABC transporter permease [Burkholderia cenocepacia J2315] emb|CAR53106.1| putative ABC transporter permease protein [Burkholderia cenocepacia J2315] Length = 283 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 200/260 (76%), Positives = 236/260 (90%) Query: 12 GLLAWTCAIILFFPIFWVAVTAFKTEHQAYMPSLIFMPTLDTFREVFERSNYLAFVKNSM 71 G LAW A++LFFPIFW+A+TAFKTE QAY SL FMPTLD+FREVF RSNY AF NS+ Sbjct: 24 GTLAWLIALLLFFPIFWMAITAFKTEQQAYASSLFFMPTLDSFREVFARSNYFAFAWNSV 83 Query: 72 IVSLGSTLLSLLIAVPAAYSMAFFPTGRTQKLLLWMLSTKMMPAVGVLVPIYLLAKNSGM 131 ++S G T++SLL AVPAAY+MAFFP RTQK+LLWMLSTKMMP+VGVLVPIYLL KN+G+ Sbjct: 84 LISAGVTVISLLFAVPAAYAMAFFPNHRTQKVLLWMLSTKMMPSVGVLVPIYLLWKNAGL 143 Query: 132 LDSVTGLTLIYTLINLPIAVWMAFTYFNDVPKEILEAARIDGANAWQEMLYLLLPTAMPG 191 LD+V+GL ++YTLINLPIAVWM FTYFN++PK+ILEA RIDGA+ WQE++YLL+P A+PG Sbjct: 144 LDTVSGLVIVYTLINLPIAVWMTFTYFNEIPKDILEAGRIDGASTWQEIVYLLMPMALPG 203 Query: 192 LASTALLLIILSWNEAFWSLNLTSVDAAPLTVFIASYSNPEGLFWAKLSAASLLAIAPIM 251 LASTALLL+ILSWNEAFWS+NL+S +AAPLTVFIASYS+PEGLFWAKLSAASLLA+API+ Sbjct: 204 LASTALLLVILSWNEAFWSINLSSSNAAPLTVFIASYSSPEGLFWAKLSAASLLAVAPIL 263 Query: 252 ALGWLAQKQLVRGLTFGAVK 271 +GWL+QKQLVRGLTFGAVK Sbjct: 264 IVGWLSQKQLVRGLTFGAVK 283 >ref|YP_001578896.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans ATCC 17616] ref|YP_001946983.1| multiple sugar transporter permease [Burkholderia multivorans ATCC 17616] ref|ZP_03584371.1| putative sorbitol/mannitol ABC transporter, permease protein [Burkholderia multivorans CGD1] gb|ABX14399.1| binding-protein-dependent transport systems inner membrane component [Burkholderia multivorans ATCC 17616] dbj|BAG44447.1| multiple sugar transport system permease protein [Burkholderia multivorans ATCC 17616] gb|EEE01221.1| putative sorbitol/mannitol ABC transporter, permease protein [Burkholderia multivorans CGD1] Length = 283 Score = 414 bits (1064), Expect = e-114, Method: Compositional matrix adjust. Identities = 199/260 (76%), Positives = 236/260 (90%) Query: 12 GLLAWTCAIILFFPIFWVAVTAFKTEHQAYMPSLIFMPTLDTFREVFERSNYLAFVKNSM 71 G LAW A++LFFPIFW+A+TAFKTE QAY +L FMPTLD+FREVF RSNY AF NS+ Sbjct: 24 GTLAWLIALLLFFPIFWMAITAFKTEQQAYASTLFFMPTLDSFREVFARSNYFAFAWNSV 83 Query: 72 IVSLGSTLLSLLIAVPAAYSMAFFPTGRTQKLLLWMLSTKMMPAVGVLVPIYLLAKNSGM 131 ++S G TL+SLL AVPAAY+MAFFP RTQK+LLWMLSTKMMP+VGVLVPIYLL KN+G+ Sbjct: 84 LISAGVTLISLLFAVPAAYAMAFFPNRRTQKVLLWMLSTKMMPSVGVLVPIYLLWKNAGL 143 Query: 132 LDSVTGLTLIYTLINLPIAVWMAFTYFNDVPKEILEAARIDGANAWQEMLYLLLPTAMPG 191 LD+V+GL ++YTLINLPIAVWM FTYFN++PK+ILEA RIDGA+ WQE++YLL+P A+PG Sbjct: 144 LDTVSGLVIVYTLINLPIAVWMTFTYFNEIPKDILEAGRIDGASTWQEIVYLLMPMALPG 203 Query: 192 LASTALLLIILSWNEAFWSLNLTSVDAAPLTVFIASYSNPEGLFWAKLSAASLLAIAPIM 251 LASTALLL+ILSWNEAFWS+NL+S +AAPLTVFIASYS+PEGLFWAKLSAASLLA+API+ Sbjct: 204 LASTALLLVILSWNEAFWSINLSSSNAAPLTVFIASYSSPEGLFWAKLSAASLLAVAPIL 263 Query: 252 ALGWLAQKQLVRGLTFGAVK 271 +GW++QKQLVRGLTFGAVK Sbjct: 264 IVGWISQKQLVRGLTFGAVK 283