BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0105.p         (153 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001809983.1| fimbrial protein [Burkholderia ambifaria MC4...   130   4e-29
ref|YP_001561155.1| fimbrial protein [Delftia acidovorans SPH-1]...   116   9e-25
ref|YP_004485523.1| Fimbrial protein domain-containing protein [...   115   2e-24
ref|YP_004360811.1| fimbrial protein [Burkholderia gladioli BSR3...   115   3e-24
ref|ZP_02376755.1| Fimbrial protein [Burkholderia ubonensis Bu]       114   3e-24

>ref|YP_001809983.1| fimbrial protein [Burkholderia ambifaria MC40-6]
 gb|ACB65767.1| Fimbrial protein [Burkholderia ambifaria MC40-6]
          Length = 329

 Score =  130 bits (328), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 75/158 (47%), Positives = 102/158 (64%), Gaps = 11/158 (6%)

Query: 2   IVPQ--TCQVDTPNVVVPMGSVASSSFTGTGSVSPARNFTISVNCSG----VASQVFMTL 55
           I PQ  TC + TPN+ V +  V+     G G+ S  +   + + CSG     ++++FMTL
Sbjct: 177 IRPQVPTCNLLTPNIAVDLEKVSVGELKGIGATSLPKPMEVRLKCSGGNPGTSTRMFMTL 236

Query: 56  TDQQTQANRTSTLGLTAASSARGVGIQILRRQGNTDTPISFGADSSTAGNTNQFLAFSST 115
           TD     NR+ TL L + S+A+GVGIQILR  G+ +T +S+G DS+ AGN NQ+ A  S 
Sbjct: 237 TDSANSGNRSDTLSLASGSTAKGVGIQILR--GSDNTLVSYGPDSAQAGNPNQW-AVGSF 293

Query: 116 GEQIGATTIPFSARYIKTAATIIPGTANGVATFTMSYQ 153
           G      TIPF ARY++T+AT+IPG ANGV+TFTMSYQ
Sbjct: 294 GNV--DVTIPFRARYVRTSATVIPGKANGVSTFTMSYQ 329


>ref|YP_001561155.1| fimbrial protein [Delftia acidovorans SPH-1]
 gb|ABX32770.1| Fimbrial protein [Delftia acidovorans SPH-1]
          Length = 334

 Score =  116 bits (291), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 68/154 (44%), Positives = 91/154 (59%), Gaps = 9/154 (5%)

Query: 4   PQTCQVDTPNVVVPMGSVASSSFTGTGSVSPARNFTISVNCSGVASQ----VFMTLTDQQ 59
           P TC+V T  + V M     + F G GSV+ A++F+I + C+G  +      F+TLTD  
Sbjct: 186 PPTCRVSTGKIDVTMAPAPFADFKGIGSVTAAKDFSIELTCAGGEANTRLTAFITLTDAT 245

Query: 60  TQANRTSTLGLTAASSARGVGIQILRRQGNTDTPISFGADSSTAGNTNQFLAFSSTGEQI 119
              NR+STL L   S ARGVGIQ+LR     + P+SFG DS + GN NQ+ A     +  
Sbjct: 246 QATNRSSTLTLAQNSKARGVGIQVLR----NNVPVSFGPDSGSLGNANQWNA-GQVAQGQ 300

Query: 120 GATTIPFSARYIKTAATIIPGTANGVATFTMSYQ 153
            +  IP SAR ++TA ++ PG A G ATFTMSYQ
Sbjct: 301 NSLKIPLSARLVQTAGSVTPGMAYGRATFTMSYQ 334


>ref|YP_004485523.1| Fimbrial protein domain-containing protein [Delftia sp. Cs1-4]
 gb|AEF87168.1| Fimbrial protein domain-containing protein [Delftia sp. Cs1-4]
          Length = 334

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/154 (43%), Positives = 91/154 (59%), Gaps = 9/154 (5%)

Query: 4   PQTCQVDTPNVVVPMGSVASSSFTGTGSVSPARNFTISVNCSGVASQ----VFMTLTDQQ 59
           P TC+V T  + V M     + F G GSV+ A++F+I + C+G  +      F+TLTD  
Sbjct: 186 PPTCRVSTGKIDVTMAPAPFADFKGIGSVTAAKDFSIELTCAGGEANTRLTAFITLTDAT 245

Query: 60  TQANRTSTLGLTAASSARGVGIQILRRQGNTDTPISFGADSSTAGNTNQFLAFSSTGEQI 119
              NR+STL L   S ARGVGIQ+LR     + P++FG DS + GN NQ+ A     +  
Sbjct: 246 QATNRSSTLTLAQNSKARGVGIQVLR----NNVPVNFGPDSGSLGNANQWNA-GQVAQGQ 300

Query: 120 GATTIPFSARYIKTAATIIPGTANGVATFTMSYQ 153
            +  IP SAR ++TA ++ PG A G ATFTMSYQ
Sbjct: 301 NSLKIPLSARLVQTAGSVTPGMAYGRATFTMSYQ 334


>ref|YP_004360811.1| fimbrial protein [Burkholderia gladioli BSR3]
 gb|AEA60855.1| fimbrial protein [Burkholderia gladioli BSR3]
          Length = 328

 Score =  115 bits (287), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 68/152 (44%), Positives = 94/152 (61%), Gaps = 9/152 (5%)

Query: 6   TCQVDTPNVVVPMGSVASSSFTGTGSVSPARNFTISVNCS----GVASQVFMTLTDQQTQ 61
           TC+V TP V VPMG++ ++ FTG GS + AR F I + CS    G ++  ++TLTD    
Sbjct: 182 TCRVATPQVTVPMGNMTTAMFTGIGSTTFARRFEIELACSGGNPGTSTNAWVTLTDASQP 241

Query: 62  ANRTSTLGLTAASSARGVGIQILRRQGNTDTPISFGADSSTAGNTNQFLAFSSTGEQIGA 121
            N ++TL LT  S A G+G+QI R     DT + FG DS+  GNTNQ+   +    Q  A
Sbjct: 242 GNTSTTLSLTRDSGASGIGVQIRR----DDTVLGFGPDSAAVGNTNQWHMGNIVQGQ-AA 296

Query: 122 TTIPFSARYIKTAATIIPGTANGVATFTMSYQ 153
             +P +ARY++TAA +  G+AN  ATFT+SYQ
Sbjct: 297 LRVPLTARYVQTAAKVGAGSANARATFTLSYQ 328


>ref|ZP_02376755.1| Fimbrial protein [Burkholderia ubonensis Bu]
          Length = 222

 Score =  114 bits (286), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 73/160 (45%), Positives = 98/160 (61%), Gaps = 15/160 (9%)

Query: 2   IVPQ--TCQVDTPNVVVPMGSVASSSFTGTGSVSPARNFTISVNCSGVAS----QVFMTL 55
           I PQ  TC+V TP++ V +G V + + TG G+ + A+ F I + CSG AS    +++ TL
Sbjct: 70  IQPQVPTCRVTTPSIAVSLGKVMTRTLTGVGTTTNAQPFNIQLRCSGGASGATTRMYTTL 129

Query: 56  TDQQTQANRTSTLGLTAASSARGVGIQILRRQGNTDTPISFGADSSTAGNTNQFLAFSST 115
           TD     N ++ L L   S+A GVGIQ+LR  G+ +  IS+G DSS AGN NQ+      
Sbjct: 130 TDASQPTNVSNVLSLGTDSTASGVGIQVLR--GDNNALISYGPDSSQAGNPNQWFV---- 183

Query: 116 GEQIG--ATTIPFSARYIKTAATIIPGTANGVATFTMSYQ 153
             Q G    TIP  ARYI+T++ +  GTANG ATFTMSYQ
Sbjct: 184 -GQFGNVDVTIPLKARYIQTSSDVKAGTANGRATFTMSYQ 222