BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0103.p         (162 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003773864.1| DNA-binding ferritin-like protein [Herbaspir...   317   4e-85
ref|YP_004751377.1| Iron-binding ferritin-like antioxidant prote...   292   1e-77
ref|YP_585082.1| metalloregulation DNA-binding stress protein [C...   286   7e-76
ref|YP_297009.1| Ferritin and Dps [Ralstonia eutropha JMP134] >g...   285   2e-75
ref|YP_727551.1| metalloregulation DNA-binding stress protein [R...   285   2e-75

>ref|YP_003773864.1| DNA-binding ferritin-like protein [Herbaspirillum seropedicae SmR1]
 emb|CAM32646.1| DNA-binding ferritin-like protein (oxidative damage protectant)
           protein [Herbaspirillum seropedicae]
 gb|ADJ61956.1| DNA-binding ferritin-like protein [Herbaspirillum seropedicae SmR1]
          Length = 164

 Score =  317 bits (812), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 155/164 (94%), Positives = 158/164 (96%), Gaps = 2/164 (1%)

Query: 1   MAKKNVAA--INIGINDKDRKKIADGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMF 58
           MAKKNVAA  INIGINDKDRKKIADGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMF
Sbjct: 1   MAKKNVAAPSINIGINDKDRKKIADGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMF 60

Query: 59  EGQYTELALAVDLIAERIRALGYPAPGSYKEFAKLSSIPEAEGVPAAEEMIRQLVAGQEA 118
           EGQY ELALAVDLIAERIRALGYPAPGSYKEFAKLSSIPEA+GVP A+EMI QLVAGQEA
Sbjct: 61  EGQYNELALAVDLIAERIRALGYPAPGSYKEFAKLSSIPEADGVPNAQEMIAQLVAGQEA 120

Query: 119 VTRTARSMFPAVDAAADEPTADLLTQRMQLHEKNAWMLRSLLEG 162
           VTRTARS+FP VDAAADEPTADLLTQRMQLHEKNAWMLRSLLEG
Sbjct: 121 VTRTARSIFPTVDAAADEPTADLLTQRMQLHEKNAWMLRSLLEG 164


>ref|YP_004751377.1| Iron-binding ferritin-like antioxidant protein [Collimonas
           fungivorans Ter331]
 gb|AEK60554.1| Iron-binding ferritin-like antioxidant protein [Collimonas
           fungivorans Ter331]
          Length = 187

 Score =  292 bits (747), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 138/161 (85%), Positives = 147/161 (91%)

Query: 1   MAKKNVAAINIGINDKDRKKIADGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMFEG 60
           M KK+VA I+IGI+DKDRKKIADGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMFE 
Sbjct: 26  MVKKSVAVIDIGISDKDRKKIADGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMFET 85

Query: 61  QYTELALAVDLIAERIRALGYPAPGSYKEFAKLSSIPEAEGVPAAEEMIRQLVAGQEAVT 120
           QY EL LAVDLIAERIRALGYPAP +YK F+KL+SI E EGVP A  MI+QLV GQEAVT
Sbjct: 86  QYNELWLAVDLIAERIRALGYPAPATYKAFSKLTSITEEEGVPNATAMIQQLVQGQEAVT 145

Query: 121 RTARSMFPAVDAAADEPTADLLTQRMQLHEKNAWMLRSLLE 161
           RTARS+FP VDAA+DEPTADLLTQRMQLHEKNAWMLRSLLE
Sbjct: 146 RTARSIFPVVDAASDEPTADLLTQRMQLHEKNAWMLRSLLE 186


>ref|YP_585082.1| metalloregulation DNA-binding stress protein [Cupriavidus
           metallidurans CH34]
 gb|ABF09813.1| DNA protection during starvation or oxydative stress transcription
           regulator protein; Metalloregulation DNA-binding stress
           protein [Cupriavidus metallidurans CH34]
          Length = 161

 Score =  286 bits (732), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 135/160 (84%), Positives = 145/160 (90%)

Query: 1   MAKKNVAAINIGINDKDRKKIADGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMFEG 60
           MAKKN  ++NIGI+DKDRKKIA+GL KLLADTYTLYLKTHNFHWNVTGPMFNTLHLMFE 
Sbjct: 1   MAKKNEMSVNIGISDKDRKKIAEGLCKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMFET 60

Query: 61  QYTELALAVDLIAERIRALGYPAPGSYKEFAKLSSIPEAEGVPAAEEMIRQLVAGQEAVT 120
           QY ELALAVD IAERIRALGYPAPG+YKE+AKLSSI E EGVP A EMIR+LV GQEAV 
Sbjct: 61  QYNELALAVDAIAERIRALGYPAPGTYKEYAKLSSIAEEEGVPEATEMIRKLVEGQEAVV 120

Query: 121 RTARSMFPAVDAAADEPTADLLTQRMQLHEKNAWMLRSLL 160
           RTARS+FPA+DAA DEP+ADLLTQRMQ HEK AWMLRSLL
Sbjct: 121 RTARSLFPAIDAAGDEPSADLLTQRMQTHEKTAWMLRSLL 160


>ref|YP_297009.1| Ferritin and Dps [Ralstonia eutropha JMP134]
 gb|AAZ62165.1| Ferritin and Dps [Ralstonia eutropha JMP134]
          Length = 161

 Score =  285 bits (729), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 134/160 (83%), Positives = 146/160 (91%)

Query: 1   MAKKNVAAINIGINDKDRKKIADGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMFEG 60
           MAKKN  ++NIGI+DKDRKKIA+GLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMFE 
Sbjct: 1   MAKKNEMSVNIGISDKDRKKIAEGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMFET 60

Query: 61  QYTELALAVDLIAERIRALGYPAPGSYKEFAKLSSIPEAEGVPAAEEMIRQLVAGQEAVT 120
           QY ELALAVD IAERIRALGYPAPG+YKE+A+LSSI E EGVP A EMIR+LV GQEAV 
Sbjct: 61  QYNELALAVDSIAERIRALGYPAPGTYKEYARLSSIQEEEGVPEATEMIRKLVEGQEAVV 120

Query: 121 RTARSMFPAVDAAADEPTADLLTQRMQLHEKNAWMLRSLL 160
           RTARS+FP VDAA+DEP+ADLLTQRMQ HEK AWMLRS+L
Sbjct: 121 RTARSIFPLVDAASDEPSADLLTQRMQTHEKTAWMLRSML 160


>ref|YP_727551.1| metalloregulation DNA-binding stress protein [Ralstonia eutropha
           H16]
 emb|CAJ94183.1| Metalloregulation DNA-binding stress protein [Ralstonia eutropha
           H16]
          Length = 161

 Score =  285 bits (729), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 133/160 (83%), Positives = 146/160 (91%)

Query: 1   MAKKNVAAINIGINDKDRKKIADGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMFEG 60
           MAKKN  ++NIGI+DKDRKKIA+GLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMFE 
Sbjct: 1   MAKKNEMSVNIGISDKDRKKIAEGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMFET 60

Query: 61  QYTELALAVDLIAERIRALGYPAPGSYKEFAKLSSIPEAEGVPAAEEMIRQLVAGQEAVT 120
           QYTELALAVD IAERIRALGYPAPG+YKE+A+LSSI E EGVP A EMIR+LV GQEAV 
Sbjct: 61  QYTELALAVDSIAERIRALGYPAPGTYKEYARLSSIAEEEGVPEATEMIRKLVEGQEAVV 120

Query: 121 RTARSMFPAVDAAADEPTADLLTQRMQLHEKNAWMLRSLL 160
           RTARS+FP +DAA DEP+ADLLTQRMQ HEK AWMLR++L
Sbjct: 121 RTARSLFPVIDAAGDEPSADLLTQRMQTHEKTAWMLRAML 160