BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0102.p (293 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001860420.1| major facilitator transporter [Burkholderia ... 311 8e-83 ref|ZP_03268381.1| major facilitator superfamily MFS_1 [Burkhold... 311 8e-83 ref|YP_776958.1| major facilitator transporter [Burkholderia amb... 310 1e-82 ref|ZP_02383102.1| major facilitator superfamily MFS_1 [Burkhold... 310 2e-82 ref|YP_001809904.1| major facilitator transporter [Burkholderia ... 310 3e-82 >ref|YP_001860420.1| major facilitator transporter [Burkholderia phymatum STM815] gb|ACC73374.1| major facilitator superfamily MFS_1 [Burkholderia phymatum STM815] Length = 428 Score = 311 bits (797), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 143/275 (52%), Positives = 201/275 (73%), Gaps = 3/275 (1%) Query: 2 QGITHSFSRLGNAVAPPIVALLIVLHSWRAAFIIVGALTALWIIAWAVYYKDNPREHKAI 61 QGITH+ +R+GNAVAP ++ L++ WR +F I GA + LW++ WA+ + ++P+EH+ I Sbjct: 138 QGITHAAARIGNAVAPGVIVLVMTTWGWRESFYICGAFSLLWVVVWAMTFAEHPKEHRRI 197 Query: 62 NEAELARLPEHVKVTANGGDTPWKKILRRMSPTIFVYFCQVWTNTLFFSWVPIFFMNAYH 121 +AEL LP N PWK + +RM+P VYFC WT LF SW+P +F+++YH Sbjct: 198 TQAELDVLPAPKPKAPN---LPWKALFKRMAPVTVVYFCYGWTLWLFLSWIPQYFLHSYH 254 Query: 122 LDIKKSAIFASGVFFAGVVGDVTGGLISDKVLKKTGSLPMARQGVIAFSLLGTLCFLVPV 181 LD+KKSA+FAS VFFAGV+GD GG+++DKV ++TG+L AR +++ +L TL LVP+ Sbjct: 255 LDLKKSAVFASAVFFAGVIGDTLGGIVTDKVFERTGNLRRARSWMVSICMLLTLASLVPL 314 Query: 182 MLSHDVNVVAWCLSGAFFMLELTIGPIWAVPMDVAPEYTGTASGMLNTGAALATIISPVV 241 ML+H++ V CLS FF E+TIGP+WA+PMD+APEY+GTASGM+NTG+ALA IISPV+ Sbjct: 315 MLTHNLYVSMVCLSAGFFFAEMTIGPMWAIPMDIAPEYSGTASGMMNTGSALAAIISPVL 374 Query: 242 FGTVIDLTGNWNLPFVGSAVFLLIGAVMALKMRPD 276 G +ID GNW LPF GS + + IG V+A +M+P+ Sbjct: 375 SGYLIDTFGNWELPFAGSMLLMAIGVVLAFRMQPE 409 >ref|ZP_03268381.1| major facilitator superfamily MFS_1 [Burkholderia sp. H160] gb|EEA00009.1| major facilitator superfamily MFS_1 [Burkholderia sp. H160] Length = 442 Score = 311 bits (797), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 146/289 (50%), Positives = 206/289 (71%), Gaps = 2/289 (0%) Query: 1 VQGITHSFSRLGNAVAPPIVALLIVLHSWRAAFIIVGALTALWIIAWAVYYKDNPREHKA 60 VQG+THSFSRLGNAV PP+VALL+ SWRA+F+ VGALT +W++ +A Y+ D+PR+H+ Sbjct: 134 VQGLTHSFSRLGNAVTPPLVALLVAYSSWRASFLAVGALTFVWVVVYAWYFTDDPRKHRH 193 Query: 61 INEAELARLP--EHVKVTANGGDTPWKKILRRMSPTIFVYFCQVWTNTLFFSWVPIFFMN 118 + + +LP V A TPW+++L+R++PT+ VYFC WT LFF+W+P FFM+ Sbjct: 194 MTAEQETQLPPVRQSAVDATREPTPWRRLLKRIAPTMLVYFCYGWTGWLFFTWLPTFFMH 253 Query: 119 AYHLDIKKSAIFASGVFFAGVVGDVTGGLISDKVLKKTGSLPMARQGVIAFSLLGTLCFL 178 LD+K SA+F++GVF +GVVG+ GG++SD+VLK+T ++ AR+ VI + LG L FL Sbjct: 254 GRGLDLKSSAMFSAGVFLSGVVGNTAGGMLSDRVLKRTRNVVAARRNVIICAFLGALVFL 313 Query: 179 VPVMLSHDVNVVAWCLSGAFFMLELTIGPIWAVPMDVAPEYTGTASGMLNTGAALATIIS 238 PVM+ + V+A C+S +FF LE+TIGPIWAVPMD+ P++ G ASG++N G+A+A I + Sbjct: 314 APVMVVKSLPVMAACMSLSFFFLEMTIGPIWAVPMDITPQHVGVASGLVNAGSAVAGIFT 373 Query: 239 PVVFGTVIDLTGNWNLPFVGSAVFLLIGAVMALKMRPDRDIHFFEHQHD 287 P+VFG ++D TG+W LPF GS L +G V MRPD + Q D Sbjct: 374 PIVFGLIVDRTGSWTLPFAGSLGLLALGIVATFFMRPDIPLDAAPAQTD 422 >ref|YP_776958.1| major facilitator transporter [Burkholderia ambifaria AMMD] gb|ABI90624.1| major facilitator superfamily MFS_1 [Burkholderia ambifaria AMMD] Length = 430 Score = 310 bits (795), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 149/279 (53%), Positives = 196/279 (70%) Query: 1 VQGITHSFSRLGNAVAPPIVALLIVLHSWRAAFIIVGALTALWIIAWAVYYKDNPREHKA 60 VQG THSFSRLGNAV PPIVA L+ SWRAAF ++GA+T +W++ W V +++ PR Sbjct: 135 VQGFTHSFSRLGNAVTPPIVAALMTWLSWRAAFFVIGAVTMVWLVWWVVGFREYPRGESD 194 Query: 61 INEAELARLPEHVKVTANGGDTPWKKILRRMSPTIFVYFCQVWTNTLFFSWVPIFFMNAY 120 N + A G TPW + RRM+PTIFVYFC WT LFF+W+P FF+N Sbjct: 195 GNGVGRTHTAATARRAAPSGPTPWGPLFRRMAPTIFVYFCYGWTAWLFFTWLPTFFLNGQ 254 Query: 121 HLDIKKSAIFASGVFFAGVVGDVTGGLISDKVLKKTGSLPMARQGVIAFSLLGTLCFLVP 180 L++K +A+FASGVFFAGVVGD GG + D++ +KTG+L ++RQ VI S G L L+P Sbjct: 255 GLNLKSTALFASGVFFAGVVGDTLGGWLCDRIYRKTGNLALSRQSVIVTSFTGALVCLLP 314 Query: 181 VMLSHDVNVVAWCLSGAFFMLELTIGPIWAVPMDVAPEYTGTASGMLNTGAALATIISPV 240 + H +A CLSG+F LELTIGPIWAVP D+AP++ G ASGM+N G+A+A I+SP+ Sbjct: 315 LAFVHSTAGIALCLSGSFLCLELTIGPIWAVPSDIAPQHAGIASGMMNAGSAIAGILSPI 374 Query: 241 VFGTVIDLTGNWNLPFVGSAVFLLIGAVMALKMRPDRDI 279 +FG ++D TG+W +PFVGS LLIG V AL++RPDR + Sbjct: 375 LFGYLVDRTGSWTVPFVGSVAMLLIGIVAALRIRPDRAL 413 >ref|ZP_02383102.1| major facilitator superfamily MFS_1 [Burkholderia ubonensis Bu] Length = 436 Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 146/279 (52%), Positives = 203/279 (72%), Gaps = 4/279 (1%) Query: 1 VQGITHSFSRLGNAVAPPIVALLIVLHSWRAAFIIVGALTALWIIAWAVYYKDNPREHKA 60 VQG+THSFSRLGNAV PP+VA ++ + SWRA+F+ GALTA+W+I +A Y+ D+PR H+ Sbjct: 135 VQGLTHSFSRLGNAVTPPLVAFVVAIASWRASFVAAGALTAVWVIVYAWYFADDPRRHRH 194 Query: 61 INEAELARLPEHVKVTANG---GDTPWKKILRRMSPTIFVYFCQVWTNTLFFSWVPIFFM 117 + AE A LP + A+ TPW+++L R++PT+ VYFC WT LFF+W+P FFM Sbjct: 195 MCAAEAADLPP-ARAAADSQAHARTPWRRLLARIAPTMAVYFCYGWTGWLFFTWLPTFFM 253 Query: 118 NAYHLDIKKSAIFASGVFFAGVVGDVTGGLISDKVLKKTGSLPMARQGVIAFSLLGTLCF 177 + LD+K+SA+F++GVF +GVVG+ GG++SD+VLK+TG++ AR+ VI + G L F Sbjct: 254 HGRGLDLKQSALFSAGVFLSGVVGNTAGGVLSDRVLKRTGNVVAARRNVIIVAFAGALVF 313 Query: 178 LVPVMLSHDVNVVAWCLSGAFFMLELTIGPIWAVPMDVAPEYTGTASGMLNTGAALATII 237 L PVM + + V A +S +FF LE+TIGPIWAVPMD+ P + G ASG++N G+A+A I Sbjct: 314 LAPVMFAKSLTVTAASMSLSFFFLEMTIGPIWAVPMDITPRHVGVASGLVNAGSAIAGIF 373 Query: 238 SPVVFGTVIDLTGNWNLPFVGSAVFLLIGAVMALKMRPD 276 +P+VFG V+D TG+W LPF GS L++G VM MRPD Sbjct: 374 TPIVFGFVVDRTGSWTLPFAGSIALLVLGIVMTFFMRPD 412 >ref|YP_001809904.1| major facilitator transporter [Burkholderia ambifaria MC40-6] gb|ACB65688.1| major facilitator superfamily MFS_1 [Burkholderia ambifaria MC40-6] Length = 430 Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 148/279 (53%), Positives = 195/279 (69%) Query: 1 VQGITHSFSRLGNAVAPPIVALLIVLHSWRAAFIIVGALTALWIIAWAVYYKDNPREHKA 60 VQG THSFSRLGNAV PPIVA L+ SWRAAF ++GA+T +W++ W V +++ PR Sbjct: 135 VQGFTHSFSRLGNAVTPPIVAALMTWLSWRAAFFVIGAVTLVWLVWWVVGFREYPRGEGD 194 Query: 61 INEAELARLPEHVKVTANGGDTPWKKILRRMSPTIFVYFCQVWTNTLFFSWVPIFFMNAY 120 N + G TPW + RRM+PTIFVYFC WT LFF+W+P FF+N Sbjct: 195 GNGFGRTHTAAAARPAPASGSTPWGPLFRRMAPTIFVYFCYGWTAWLFFTWLPTFFLNGQ 254 Query: 121 HLDIKKSAIFASGVFFAGVVGDVTGGLISDKVLKKTGSLPMARQGVIAFSLLGTLCFLVP 180 L++K +A+FASGVFFAGVVGD GG + D++ +KTG+L ++RQ VI S G L L+P Sbjct: 255 GLNLKSTALFASGVFFAGVVGDTLGGWLCDRIYRKTGNLALSRQSVIVASFTGALVCLLP 314 Query: 181 VMLSHDVNVVAWCLSGAFFMLELTIGPIWAVPMDVAPEYTGTASGMLNTGAALATIISPV 240 + H +A CLSG+F LELTIGPIWAVP D+AP++ G ASGM+N G+A+A I+SP+ Sbjct: 315 LAFVHSTAGIALCLSGSFLCLELTIGPIWAVPSDIAPQHAGIASGMMNAGSAIAGILSPI 374 Query: 241 VFGTVIDLTGNWNLPFVGSAVFLLIGAVMALKMRPDRDI 279 +FG ++D TG+W +PFVGS LLIG V AL++RPDR + Sbjct: 375 LFGYLVDHTGSWTVPFVGSVAMLLIGIVAALRIRPDRAL 413