BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0093.p (299 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773860.1| thiamine biosynthesis protein [Herbaspirillu... 616 e-174 ref|YP_004751372.1| Thiamin biosynthesis protein ThiC [Collimona... 610 e-172 ref|YP_001352074.1| thiamine biosynthesis protein ThiC [Janthino... 602 e-170 ref|YP_001098690.1| thiamine biosynthesis protein ThiC [Herminii... 600 e-169 ref|ZP_08273524.1| Thiamin biosynthesis protein ThiC [Oxalobacte... 595 e-168 >ref|YP_003773860.1| thiamine biosynthesis protein [Herbaspirillum seropedicae SmR1] gb|ADJ61952.1| thiamine biosynthesis protein [Herbaspirillum seropedicae SmR1] Length = 637 Score = 616 bits (1589), Expect = e-174, Method: Compositional matrix adjust. Identities = 289/298 (96%), Positives = 296/298 (99%) Query: 1 VRLQYVPLTAKRMTGIVSRGGSIMAKWCLAHHKESFLYDHFEDICDIMKAYDVSFSLGDG 60 VRLQYVPLTAKRMTGIVSRGGSIMAKWCLAHH+ESFLY+HFE+IC+IMKAYDVSFSLGDG Sbjct: 339 VRLQYVPLTAKRMTGIVSRGGSIMAKWCLAHHRESFLYEHFEEICEIMKAYDVSFSLGDG 398 Query: 61 LRPGSIYDANDEAQLGELKTLGELTKIAWKHDVQVMIEGPGHVPMHLIKENMDLQLEQCH 120 LRPGSIYDANDEAQLGEL+TLGELT+IAWKHDVQVMIEGPGHVPMHLIKENMDLQLEQCH Sbjct: 399 LRPGSIYDANDEAQLGELRTLGELTQIAWKHDVQVMIEGPGHVPMHLIKENMDLQLEQCH 458 Query: 121 EAPFYTLGPLTTDIAPGYDHITSGIGAAQIGWYGTAMLCYVTPKEHLGLPNKVDVKDGII 180 EAPFYTLGPLTTDIAPGYDHITSGIGAAQIGWYGTAMLCYVTPKEHLGLPNK DVKDGII Sbjct: 459 EAPFYTLGPLTTDIAPGYDHITSGIGAAQIGWYGTAMLCYVTPKEHLGLPNKTDVKDGII 518 Query: 181 TYKIAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNIGLDPDKAREFHDETLPKDSA 240 TYKIAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNIGLDPDKAREFHDETLPKDSA Sbjct: 519 TYKIAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNIGLDPDKAREFHDETLPKDSA 578 Query: 241 KVAHFCSMCGPHFCSMKITQEVRDYAAKEGISEIAALKQGMEVKSVEFVKMGAEIYSK 298 KVAHFCSMCGPHFCSMKITQEVRDYAAKEGISEI ALKQGM+VKSVEFVKMGAEIYSK Sbjct: 579 KVAHFCSMCGPHFCSMKITQEVRDYAAKEGISEIDALKQGMQVKSVEFVKMGAEIYSK 636 >ref|YP_004751372.1| Thiamin biosynthesis protein ThiC [Collimonas fungivorans Ter331] gb|AEK60549.1| Thiamin biosynthesis protein ThiC [Collimonas fungivorans Ter331] Length = 640 Score = 610 bits (1572), Expect = e-172, Method: Compositional matrix adjust. Identities = 285/298 (95%), Positives = 295/298 (98%) Query: 1 VRLQYVPLTAKRMTGIVSRGGSIMAKWCLAHHKESFLYDHFEDICDIMKAYDVSFSLGDG 60 VRLQYVP+TAKR+TGIVSRGGSIMAKWCLAHH+ESFLYDHFEDIC+IMKAYDVSFSLGDG Sbjct: 342 VRLQYVPMTAKRLTGIVSRGGSIMAKWCLAHHRESFLYDHFEDICEIMKAYDVSFSLGDG 401 Query: 61 LRPGSIYDANDEAQLGELKTLGELTKIAWKHDVQVMIEGPGHVPMHLIKENMDLQLEQCH 120 LRPGSIYDANDEAQLGELKTLGELT+IAWKHDVQVMIEGPGHVPMHLIKENMDLQLEQCH Sbjct: 402 LRPGSIYDANDEAQLGELKTLGELTQIAWKHDVQVMIEGPGHVPMHLIKENMDLQLEQCH 461 Query: 121 EAPFYTLGPLTTDIAPGYDHITSGIGAAQIGWYGTAMLCYVTPKEHLGLPNKVDVKDGII 180 EAPFYTLGPLTTDIAPGYDHITSGIGAA IGWYGTAMLCYVTPKEHLGLPNKVDVKDGII Sbjct: 462 EAPFYTLGPLTTDIAPGYDHITSGIGAATIGWYGTAMLCYVTPKEHLGLPNKVDVKDGII 521 Query: 181 TYKIAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNIGLDPDKAREFHDETLPKDSA 240 TYKIAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNIGLDPDKAREFHDETLPKDSA Sbjct: 522 TYKIAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNIGLDPDKAREFHDETLPKDSA 581 Query: 241 KVAHFCSMCGPHFCSMKITQEVRDYAAKEGISEIAALKQGMEVKSVEFVKMGAEIYSK 298 KVAHFCSMCGPHFCSMKITQEVR+YAA +GIS+IAALKQGMEVK++EFVK GAEIYSK Sbjct: 582 KVAHFCSMCGPHFCSMKITQEVREYAAAQGISDIAALKQGMEVKAIEFVKNGAEIYSK 639 >ref|YP_001352074.1| thiamine biosynthesis protein ThiC [Janthinobacterium sp. Marseille] sp|A6SUX7.1|THIC_JANMA RecName: Full=Phosphomethylpyrimidine synthase; AltName: Full=Hydroxymethylpyrimidine phosphate synthase; Short=HMP-P synthase; Short=HMP-phosphate synthase; Short=HMPP synthase; AltName: Full=Thiamine biosynthesis protein thiC gb|ABR88562.1| thiamine biosynthesis protein [Janthinobacterium sp. Marseille] Length = 637 Score = 602 bits (1551), Expect = e-170, Method: Compositional matrix adjust. Identities = 282/298 (94%), Positives = 292/298 (97%) Query: 1 VRLQYVPLTAKRMTGIVSRGGSIMAKWCLAHHKESFLYDHFEDICDIMKAYDVSFSLGDG 60 V L+YVP+TAKRMTGIVSRGGSIMAKWCLAHHKESFLY+HFEDIC+IMKAYDVSFSLGDG Sbjct: 339 VLLRYVPMTAKRMTGIVSRGGSIMAKWCLAHHKESFLYEHFEDICEIMKAYDVSFSLGDG 398 Query: 61 LRPGSIYDANDEAQLGELKTLGELTKIAWKHDVQVMIEGPGHVPMHLIKENMDLQLEQCH 120 LRPGSIYDANDEAQLGELKTLGELT+IAWKHDVQVMIEGPGHVPMHLIKENMDLQLEQCH Sbjct: 399 LRPGSIYDANDEAQLGELKTLGELTQIAWKHDVQVMIEGPGHVPMHLIKENMDLQLEQCH 458 Query: 121 EAPFYTLGPLTTDIAPGYDHITSGIGAAQIGWYGTAMLCYVTPKEHLGLPNKVDVKDGII 180 EAPFYTLGPLTTDIAPGYDHITSGIGAAQIGWYGTAMLCYVTPKEHLGLPNKVDVKDGII Sbjct: 459 EAPFYTLGPLTTDIAPGYDHITSGIGAAQIGWYGTAMLCYVTPKEHLGLPNKVDVKDGII 518 Query: 181 TYKIAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNIGLDPDKAREFHDETLPKDSA 240 TYKIAAHAADLAKGH GAQIRDNALSKARFEFRWEDQFNIGLDPDKAREFHDETLPKDSA Sbjct: 519 TYKIAAHAADLAKGHIGAQIRDNALSKARFEFRWEDQFNIGLDPDKAREFHDETLPKDSA 578 Query: 241 KVAHFCSMCGPHFCSMKITQEVRDYAAKEGISEIAALKQGMEVKSVEFVKMGAEIYSK 298 KVAHFCSMCGPHFCSMKITQEVRDYAAK+GI+EI ALK GMEVK++EFVK G+EIY K Sbjct: 579 KVAHFCSMCGPHFCSMKITQEVRDYAAKQGITEIQALKAGMEVKAIEFVKSGSEIYQK 636 >ref|YP_001098690.1| thiamine biosynthesis protein ThiC [Herminiimonas arsenicoxydans] sp|A4G224.1|THIC_HERAR RecName: Full=Phosphomethylpyrimidine synthase; AltName: Full=Hydroxymethylpyrimidine phosphate synthase; Short=HMP-P synthase; Short=HMP-phosphate synthase; Short=HMPP synthase; AltName: Full=Thiamine biosynthesis protein thiC emb|CAL60561.1| Thiamine biosynthesis protein [Herminiimonas arsenicoxydans] Length = 637 Score = 600 bits (1546), Expect = e-169, Method: Compositional matrix adjust. Identities = 280/298 (93%), Positives = 293/298 (98%) Query: 1 VRLQYVPLTAKRMTGIVSRGGSIMAKWCLAHHKESFLYDHFEDICDIMKAYDVSFSLGDG 60 V L+YVP+TAKRMTGIVSRGGSIMAKWCLAHHKESFLY+HFEDIC+IMKAYDVSFSLGDG Sbjct: 339 VLLRYVPMTAKRMTGIVSRGGSIMAKWCLAHHKESFLYEHFEDICEIMKAYDVSFSLGDG 398 Query: 61 LRPGSIYDANDEAQLGELKTLGELTKIAWKHDVQVMIEGPGHVPMHLIKENMDLQLEQCH 120 LRPGSIYDANDEAQLGELKTLGELT+IAWKHDVQVMIEGPGHVPMHLIKENMDLQLEQCH Sbjct: 399 LRPGSIYDANDEAQLGELKTLGELTQIAWKHDVQVMIEGPGHVPMHLIKENMDLQLEQCH 458 Query: 121 EAPFYTLGPLTTDIAPGYDHITSGIGAAQIGWYGTAMLCYVTPKEHLGLPNKVDVKDGII 180 EAPFYTLGPLTTDIAPGYDHITSGIGAAQIGWYGTAMLCYVTPKEHLGLPNKVDVKDGII Sbjct: 459 EAPFYTLGPLTTDIAPGYDHITSGIGAAQIGWYGTAMLCYVTPKEHLGLPNKVDVKDGII 518 Query: 181 TYKIAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNIGLDPDKAREFHDETLPKDSA 240 TYKIAAHAADLAKGH GAQIRDNALSKARFEFRW+DQFNIGLDPDKAREFHDETLPKDSA Sbjct: 519 TYKIAAHAADLAKGHIGAQIRDNALSKARFEFRWDDQFNIGLDPDKAREFHDETLPKDSA 578 Query: 241 KVAHFCSMCGPHFCSMKITQEVRDYAAKEGISEIAALKQGMEVKSVEFVKMGAEIYSK 298 KVAHFCSMCGPHFCSMKITQEVR+YAAK+GI+EI ALK+GMEVK++EFVK G+EIY K Sbjct: 579 KVAHFCSMCGPHFCSMKITQEVREYAAKQGITEIQALKKGMEVKAIEFVKSGSEIYQK 636 >ref|ZP_08273524.1| Thiamin biosynthesis protein ThiC [Oxalobacteraceae bacterium IMCC9480] gb|EGF33006.1| Thiamin biosynthesis protein ThiC [Oxalobacteraceae bacterium IMCC9480] Length = 646 Score = 595 bits (1534), Expect = e-168, Method: Compositional matrix adjust. Identities = 277/298 (92%), Positives = 290/298 (97%) Query: 1 VRLQYVPLTAKRMTGIVSRGGSIMAKWCLAHHKESFLYDHFEDICDIMKAYDVSFSLGDG 60 V L+YVP+TAKR+TGIVSRGGSIMAKWCLAHH+ESFLY HF DICDIMKAYDVSFSLGDG Sbjct: 348 VLLRYVPMTAKRLTGIVSRGGSIMAKWCLAHHEESFLYTHFNDICDIMKAYDVSFSLGDG 407 Query: 61 LRPGSIYDANDEAQLGELKTLGELTKIAWKHDVQVMIEGPGHVPMHLIKENMDLQLEQCH 120 LRPGSI+DANDEAQL ELKTLGELT+IAW+HDVQVMIEGPGHVPMHLIKENMDLQLEQCH Sbjct: 408 LRPGSIFDANDEAQLAELKTLGELTQIAWQHDVQVMIEGPGHVPMHLIKENMDLQLEQCH 467 Query: 121 EAPFYTLGPLTTDIAPGYDHITSGIGAAQIGWYGTAMLCYVTPKEHLGLPNKVDVKDGII 180 EAPFYTLGPLTTDIAPGYDHITSGIGAAQIGWYGTAMLCYVTPKEHLGLPNK DVKDGII Sbjct: 468 EAPFYTLGPLTTDIAPGYDHITSGIGAAQIGWYGTAMLCYVTPKEHLGLPNKQDVKDGII 527 Query: 181 TYKIAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNIGLDPDKAREFHDETLPKDSA 240 TYKIAAHAADLAKGHP AQIRDNALSKARFEFRW+DQFNIGLDPDKAREFHDETLPKDSA Sbjct: 528 TYKIAAHAADLAKGHPSAQIRDNALSKARFEFRWDDQFNIGLDPDKAREFHDETLPKDSA 587 Query: 241 KVAHFCSMCGPHFCSMKITQEVRDYAAKEGISEIAALKQGMEVKSVEFVKMGAEIYSK 298 KVAHFCSMCGPHFCSMKITQEVRDYAAK+GIS+IAALKQGMEVK++EFVK GAE+Y K Sbjct: 588 KVAHFCSMCGPHFCSMKITQEVRDYAAKQGISDIAALKQGMEVKAIEFVKSGAELYRK 645