BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0088.p         (151 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003773857.1| hypothetical protein Hsero_0424 [Herbaspiril...   239   7e-62
ref|YP_004751368.1| hypothetical protein CFU_0711 [Collimonas fu...   236   9e-61
ref|YP_001352002.1| hypothetical protein mma_0312 [Janthinobacte...   234   4e-60
ref|YP_001098616.1| hypothetical protein HEAR0259 [Herminiimonas...   225   2e-57
ref|YP_003523943.1| hypothetical protein Slit_1319 [Sideroxydans...   217   4e-55

>ref|YP_003773857.1| hypothetical protein Hsero_0424 [Herbaspirillum seropedicae SmR1]
 gb|ADJ61949.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 151

 Score =  239 bits (611), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 114/146 (78%), Positives = 126/146 (86%)

Query: 1   MHIWVDADACPGVIKDMLFRVADRTQIMVTLVANRYLRTPPSRFIKSILVPAGFDVADKE 60
           M IWVDADACPGVIKDMLFRVADRT I VTLVANR LRTPPSR+IKS++VPAGFDVAD+E
Sbjct: 1   MAIWVDADACPGVIKDMLFRVADRTTITVTLVANRPLRTPPSRYIKSMVVPAGFDVADRE 60

Query: 61  IVKLAQAGDLVITADIPLAAEVVANGVAVLNPRGEMYTVDNIQQHLTMRNFMEELRGSGV 120
           I +L  +GDLV+TADIPLAAEVVA G   LNPRGE+YT  NI  HL+ RNFMEELR SGV
Sbjct: 61  IARLVASGDLVVTADIPLAAEVVAKGALALNPRGELYTAQNIGHHLSTRNFMEELRSSGV 120

Query: 121 ETGGPAAFSQADGRAFARQLDRFVAQ 146
           ETGGPAAFS  DGRAFAR+LDR+V +
Sbjct: 121 ETGGPAAFSAGDGRAFARELDRYVLK 146


>ref|YP_004751368.1| hypothetical protein CFU_0711 [Collimonas fungivorans Ter331]
 gb|AEK60545.1| hypothetical protein CFU_0711 [Collimonas fungivorans Ter331]
          Length = 175

 Score =  236 bits (602), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 113/148 (76%), Positives = 128/148 (86%)

Query: 1   MHIWVDADACPGVIKDMLFRVADRTQIMVTLVANRYLRTPPSRFIKSILVPAGFDVADKE 60
           M IWVDADACPGVIK++LFRVADR QI+VTLVANR LR PPSRFIK++ V +GFDVAD+E
Sbjct: 26  MQIWVDADACPGVIKEILFRVADRLQIVVTLVANRLLRVPPSRFIKAVQVASGFDVADRE 85

Query: 61  IVKLAQAGDLVITADIPLAAEVVANGVAVLNPRGEMYTVDNIQQHLTMRNFMEELRGSGV 120
           IV+L QAGDLVITADIPLAA+V+  G   LNPRGE YT DNIQQHLTMRNFM+ELRGSGV
Sbjct: 86  IVRLLQAGDLVITADIPLAADVLEKGGNALNPRGEFYTKDNIQQHLTMRNFMDELRGSGV 145

Query: 121 ETGGPAAFSQADGRAFARQLDRFVAQHK 148
           ETGGPAAFSQ+D   FA QLDRF+ + +
Sbjct: 146 ETGGPAAFSQSDRHLFAAQLDRFLQKSR 173


>ref|YP_001352002.1| hypothetical protein mma_0312 [Janthinobacterium sp. Marseille]
 sp|A6SUQ5.1|Y312_JANMA RecName: Full=UPF0178 protein mma_0312
 gb|ABR89957.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 151

 Score =  234 bits (596), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 112/148 (75%), Positives = 128/148 (86%)

Query: 1   MHIWVDADACPGVIKDMLFRVADRTQIMVTLVANRYLRTPPSRFIKSILVPAGFDVADKE 60
           M IWVDADACP VIKD+LFRVADR Q+ VTLVAN+ LRTPPSRFIK+I VPAGFDVAD E
Sbjct: 1   MQIWVDADACPNVIKDVLFRVADRLQVQVTLVANKLLRTPPSRFIKAIQVPAGFDVADNE 60

Query: 61  IVKLAQAGDLVITADIPLAAEVVANGVAVLNPRGEMYTVDNIQQHLTMRNFMEELRGSGV 120
           IV+L QAGDLVITADIPLAA+V+  G   LNPRGE YT DNIQQHLTMR+FM++LR SGV
Sbjct: 61  IVRLVQAGDLVITADIPLAADVLEKGGHPLNPRGEFYTKDNIQQHLTMRSFMDDLRSSGV 120

Query: 121 ETGGPAAFSQADGRAFARQLDRFVAQHK 148
           +TGGP+AFSQ D RAFA QLDR++A+ +
Sbjct: 121 DTGGPSAFSQGDIRAFANQLDRYLARQR 148


>ref|YP_001098616.1| hypothetical protein HEAR0259 [Herminiimonas arsenicoxydans]
 sp|A4G1V0.1|Y259_HERAR RecName: Full=UPF0178 protein HEAR0259
 emb|CAL60487.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans]
          Length = 149

 Score =  225 bits (573), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 108/146 (73%), Positives = 121/146 (82%)

Query: 1   MHIWVDADACPGVIKDMLFRVADRTQIMVTLVANRYLRTPPSRFIKSILVPAGFDVADKE 60
           M IWVDADACP VIKD+LFRVADR Q+ VTLVAN+ LRTPPSRFI++I VPAGFDVAD E
Sbjct: 1   MQIWVDADACPSVIKDVLFRVADRLQVQVTLVANKLLRTPPSRFIRAIQVPAGFDVADNE 60

Query: 61  IVKLAQAGDLVITADIPLAAEVVANGVAVLNPRGEMYTVDNIQQHLTMRNFMEELRGSGV 120
           IV+L Q GDLVIT DIPLAA+V+  G   LNPRGE YT D IQQ LTMR FM+ELR SGV
Sbjct: 61  IVRLVQEGDLVITGDIPLAADVLEKGGLPLNPRGEFYTKDTIQQQLTMRTFMDELRSSGV 120

Query: 121 ETGGPAAFSQADGRAFARQLDRFVAQ 146
           +TGGPAAFSQ+D R FA QLDRF+ +
Sbjct: 121 DTGGPAAFSQSDTRNFANQLDRFLTR 146


>ref|YP_003523943.1| hypothetical protein Slit_1319 [Sideroxydans lithotrophicus ES-1]
 gb|ADE11556.1| protein of unknown function DUF188 [Sideroxydans lithotrophicus
           ES-1]
          Length = 163

 Score =  217 bits (553), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 104/151 (68%), Positives = 125/151 (82%), Gaps = 1/151 (0%)

Query: 1   MHIWVDADACPGVIKDMLFRVADRTQIMVTLVANRYLRTPPSRFIKSILVPAGFDVADKE 60
           M IWVDADACP VIK++LFR ADR Q+ VTLVAN+ L  PPS+FI+++ VPAGFDVAD +
Sbjct: 1   MQIWVDADACPKVIKEILFRAADRRQMQVTLVANKLLYCPPSKFIRAMQVPAGFDVADNK 60

Query: 61  IVKLAQAGDLVITADIPLAAEVVANGVAVLNPRGEMYTVDNIQQHLTMRNFMEELRGSGV 120
           IV++ +AGDLV+TADIPLAAEV+A G  VLNPRGE YT D IQ+ LTMRNFM+ LR SGV
Sbjct: 61  IVQMTEAGDLVVTADIPLAAEVIARGGHVLNPRGEFYTKDTIQERLTMRNFMDGLRSSGV 120

Query: 121 ETGGPAAFSQADGRAFARQLDRFVAQH-KPS 150
           ETGGP   SQ+D +AFA QLDRF+A+H +PS
Sbjct: 121 ETGGPPTLSQSDRQAFANQLDRFLAKHVRPS 151