BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0084.p (303 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773853.1| hypothetical protein Hsero_0420 [Herbaspiril... 397 e-108 gb|AAT51174.1| PA1857 [synthetic construct] 394 e-108 ref|YP_001348794.1| hypothetical protein PSPA7_3434 [Pseudomonas... 393 e-107 ref|NP_250548.1| hypothetical protein PA1857 [Pseudomonas aerugi... 393 e-107 ref|YP_791384.1| hypothetical protein PA14_40490 [Pseudomonas ae... 392 e-107 >ref|YP_003773853.1| hypothetical protein Hsero_0420 [Herbaspirillum seropedicae SmR1] gb|ADJ61945.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 313 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 230/311 (73%), Positives = 260/311 (83%), Gaps = 9/311 (2%) Query: 1 MAGSSFFALIDDIAGILDDVSAMTKVAAKKTAGVLGDDLALNAQQVSGVNADRELPVVWA 60 MAGS+FFALIDDIA +LDDVS MTKVAAKKTAGVLGDDLALNAQQV+GV A+RELPVVWA Sbjct: 1 MAGSAFFALIDDIATVLDDVSLMTKVAAKKTAGVLGDDLALNAQQVAGVRAERELPVVWA 60 Query: 61 VAVGSLKNKAILVPAALAISAFAPWAVTPLLMLGGAFLCFEGFEKLAHKYLPHEDEHHGE 120 VA GSLKNKAILVPAALAISAF PWAVTPLLMLGGAFLCFEGFEKLAHKYLPH++EHH Sbjct: 61 VAKGSLKNKAILVPAALAISAFIPWAVTPLLMLGGAFLCFEGFEKLAHKYLPHDEEHHEV 120 Query: 121 AA-APEAMES---EQDKIKGAIRTDFILSAEIIAITLGTVADAPLQQQITVLIGIALIMT 176 AA APE ++ EQ+KIK A+RTDFILSAEIIAITLGTVA A LQQQITVL+GIALIMT Sbjct: 121 AARAPEDIDPLVYEQEKIKDAVRTDFILSAEIIAITLGTVAGASLQQQITVLVGIALIMT 180 Query: 177 VGVYGVVAGIVKLDDGGLYLLR--TGGAIGR---RIGRAILVAAPYMMKSLTVIGTVAMF 231 GVYG+VAGIVKLDDGGLYL++ + A GR IGRA+L AAP MM+SL+VIGT+AMF Sbjct: 181 AGVYGLVAGIVKLDDGGLYLVQHASASAWGRIKAGIGRAVLAAAPKMMRSLSVIGTIAMF 240 Query: 232 MVGGGILTHGFAPVHHWIADVSAPLAAVPAIGGLLSVLAPSALDAVFGVVAGGAVLLLVT 291 MVGGGILTHG HH I + + V IG +L +AP+ L+A+FGVVAG VL++V Sbjct: 241 MVGGGILTHGLPFAHHAIEAAAVAVEGVAVIGPVLGAIAPAVLNALFGVVAGAVVLVVVK 300 Query: 292 LMQRVLKVFKK 302 L QRVL +F+K Sbjct: 301 LAQRVLSLFRK 311 >gb|AAT51174.1| PA1857 [synthetic construct] Length = 308 Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust. Identities = 205/305 (67%), Positives = 241/305 (79%), Gaps = 3/305 (0%) Query: 1 MAGSSFFALIDDIAGILDDVSAMTKVAAKKTAGVLGDDLALNAQQVSGVNADRELPVVWA 60 MAG+S L+DDIA +LDDVS MTKVAAKKTAGVLGDDLALNAQQV+GVNADRELPVVWA Sbjct: 1 MAGASLLTLLDDIAAVLDDVSLMTKVAAKKTAGVLGDDLALNAQQVTGVNADRELPVVWA 60 Query: 61 VAVGSLKNKAILVPAALAISAFAPWAVTPLLMLGGAFLCFEGFEKLAHKYLPHEDEHHGE 120 VA GSL+NKAILVPAAL ISAFAPWAV PLLMLGGA+LCFEGFEK+AHKYLPH+DEH E Sbjct: 61 VAKGSLRNKAILVPAALLISAFAPWAVIPLLMLGGAYLCFEGFEKIAHKYLPHDDEHADE 120 Query: 121 AAAPEAMES---EQDKIKGAIRTDFILSAEIIAITLGTVADAPLQQQITVLIGIALIMTV 177 AA ++ E+ KI GAIRTDFILSAEIIAITLGTVA++ Q+ VL+GIAL+MT+ Sbjct: 121 AALAANVDVAALEKQKIGGAIRTDFILSAEIIAITLGTVAESSFTTQVLVLVGIALVMTI 180 Query: 178 GVYGVVAGIVKLDDGGLYLLRTGGAIGRRIGRAILVAAPYMMKSLTVIGTVAMFMVGGGI 237 GVYG+VAGIVKLDD GLYL R + +G AIL APY+MK L+V+G AMFMVGGGI Sbjct: 181 GVYGLVAGIVKLDDAGLYLSRRDSGFAQGLGGAILRTAPYLMKGLSVVGMAAMFMVGGGI 240 Query: 238 LTHGFAPVHHWIADVSAPLAAVPAIGGLLSVLAPSALDAVFGVVAGGAVLLLVTLMQRVL 297 LTHG VHH I + +A + +G LL+ + P+ L+ +FG+VAG AVL V L++R+L Sbjct: 241 LTHGIPVVHHAIEQAAQSVAGIATLGPLLAAITPTLLNFLFGIVAGAAVLAGVLLVKRLL 300 Query: 298 KVFKK 302 KK Sbjct: 301 PKKKK 305 >ref|YP_001348794.1| hypothetical protein PSPA7_3434 [Pseudomonas aeruginosa PA7] gb|ABR84111.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7] Length = 307 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 206/305 (67%), Positives = 239/305 (78%), Gaps = 3/305 (0%) Query: 1 MAGSSFFALIDDIAGILDDVSAMTKVAAKKTAGVLGDDLALNAQQVSGVNADRELPVVWA 60 MAG+S L+DDIA +LDDVS MTKVAAKKTAGVLGDDLALNAQQV+GVNADRELPVVWA Sbjct: 1 MAGASLLTLLDDIAAVLDDVSLMTKVAAKKTAGVLGDDLALNAQQVTGVNADRELPVVWA 60 Query: 61 VAVGSLKNKAILVPAALAISAFAPWAVTPLLMLGGAFLCFEGFEKLAHKYLPHEDEHHGE 120 VA GSL+NKAILVPAAL ISAFAPWAV PLLMLGGA+LCFEGFEK+AHKYLPHEDEH E Sbjct: 61 VAKGSLRNKAILVPAALLISAFAPWAVIPLLMLGGAYLCFEGFEKIAHKYLPHEDEHGDE 120 Query: 121 ---AAAPEAMESEQDKIKGAIRTDFILSAEIIAITLGTVADAPLQQQITVLIGIALIMTV 177 AA + E+ KI GAIRTDFILSAEIIAITLGTVA++ Q+ VL+GIAL+MTV Sbjct: 121 QALAANVDLAALEKQKIGGAIRTDFILSAEIIAITLGTVAESSFTTQVLVLVGIALVMTV 180 Query: 178 GVYGVVAGIVKLDDGGLYLLRTGGAIGRRIGRAILVAAPYMMKSLTVIGTVAMFMVGGGI 237 GVYG+VAGIVKLDD GLYL + R +G AIL APY+MK L+V+G AMFMVGGGI Sbjct: 181 GVYGLVAGIVKLDDAGLYLSKRDSGFARGLGGAILRTAPYLMKGLSVVGMAAMFMVGGGI 240 Query: 238 LTHGFAPVHHWIADVSAPLAAVPAIGGLLSVLAPSALDAVFGVVAGGAVLLLVTLMQRVL 297 LTHG VHH I + +A + +G LL+ + P+ L+ +FG+VAG VL V L++R+L Sbjct: 241 LTHGIPLVHHAIEQAAQSVAGIATLGPLLAAITPTLLNFLFGIVAGAVVLAGVLLVKRLL 300 Query: 298 KVFKK 302 KK Sbjct: 301 PKKKK 305 >ref|NP_250548.1| hypothetical protein PA1857 [Pseudomonas aeruginosa PAO1] ref|ZP_01365208.1| hypothetical protein PaerPA_01002324 [Pseudomonas aeruginosa PACS2] ref|ZP_04933572.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gb|AAG05246.1|AE004611_11 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] gb|EAZ57691.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gb|EGM22786.1| hypothetical protein PA13_03308 [Pseudomonas aeruginosa 138244] Length = 307 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 204/305 (66%), Positives = 240/305 (78%), Gaps = 3/305 (0%) Query: 1 MAGSSFFALIDDIAGILDDVSAMTKVAAKKTAGVLGDDLALNAQQVSGVNADRELPVVWA 60 MAG+S L+DDIA +LDDVS MTKVAAKKTAGVLGDDLALNAQQV+GVNADRELPVVWA Sbjct: 1 MAGASLLTLLDDIAAVLDDVSLMTKVAAKKTAGVLGDDLALNAQQVTGVNADRELPVVWA 60 Query: 61 VAVGSLKNKAILVPAALAISAFAPWAVTPLLMLGGAFLCFEGFEKLAHKYLPHEDEHHGE 120 VA GSL+NKAILVPAAL ISAFAPWAV PLLMLGGA+LCFEGFEK+AHKYLPH+DEH E Sbjct: 61 VAKGSLRNKAILVPAALLISAFAPWAVIPLLMLGGAYLCFEGFEKIAHKYLPHDDEHADE 120 Query: 121 AAAPEAMES---EQDKIKGAIRTDFILSAEIIAITLGTVADAPLQQQITVLIGIALIMTV 177 AA ++ E+ KI GAIRTDFILSAEIIAITLGTVA++ Q+ VL+GIAL+MT+ Sbjct: 121 AALAANVDVAALEKQKIGGAIRTDFILSAEIIAITLGTVAESSFTTQVLVLVGIALVMTI 180 Query: 178 GVYGVVAGIVKLDDGGLYLLRTGGAIGRRIGRAILVAAPYMMKSLTVIGTVAMFMVGGGI 237 GVYG+VAGIVKLDD GLYL R + +G AIL APY+MK L+V+G AMFMVGGGI Sbjct: 181 GVYGLVAGIVKLDDAGLYLSRRDSGFAQGLGGAILRTAPYLMKGLSVVGMAAMFMVGGGI 240 Query: 238 LTHGFAPVHHWIADVSAPLAAVPAIGGLLSVLAPSALDAVFGVVAGGAVLLLVTLMQRVL 297 LTHG VHH I + +A + +G LL+ + P+ L+ +FG+VAG VL V L++R+L Sbjct: 241 LTHGIPVVHHAIEQAAQSVAGIATLGPLLAAITPTLLNFLFGIVAGAVVLAGVLLVKRLL 300 Query: 298 KVFKK 302 KK Sbjct: 301 PKKKK 305 >ref|YP_791384.1| hypothetical protein PA14_40490 [Pseudomonas aeruginosa UCBPP-PA14] ref|ZP_06879224.1| hypothetical protein PaerPAb_16436 [Pseudomonas aeruginosa PAb1] ref|ZP_07796445.1| putative membrane protein [Pseudomonas aeruginosa 39016] gb|ABJ11045.1| putative membrane protein [Pseudomonas aeruginosa UCBPP-PA14] gb|EFQ41541.1| putative membrane protein [Pseudomonas aeruginosa 39016] gb|EGM24446.1| hypothetical protein PA15_00872 [Pseudomonas aeruginosa 152504] dbj|BAK89625.1| hypothetical protein NCGM2_2773 [Pseudomonas aeruginosa NCGM2.S1] Length = 307 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 203/305 (66%), Positives = 240/305 (78%), Gaps = 3/305 (0%) Query: 1 MAGSSFFALIDDIAGILDDVSAMTKVAAKKTAGVLGDDLALNAQQVSGVNADRELPVVWA 60 MAG+S L+DDIA +LDDVS MTKVAAKKTAGVLGDDLALNAQQV+GVNADRELPVVWA Sbjct: 1 MAGASLLTLLDDIAAVLDDVSLMTKVAAKKTAGVLGDDLALNAQQVTGVNADRELPVVWA 60 Query: 61 VAVGSLKNKAILVPAALAISAFAPWAVTPLLMLGGAFLCFEGFEKLAHKYLPHEDEHHGE 120 VA GSL+NKAILVPAAL ISAFAPWAV PLLMLGGA+LCFEGFEK+AHKYLPH+DEH E Sbjct: 61 VAKGSLRNKAILVPAALLISAFAPWAVIPLLMLGGAYLCFEGFEKIAHKYLPHDDEHADE 120 Query: 121 AAAPEAMES---EQDKIKGAIRTDFILSAEIIAITLGTVADAPLQQQITVLIGIALIMTV 177 AA ++ E+ KI GAIRTDFILSAEIIAITLGTVA++ Q+ VL+GIAL+MT+ Sbjct: 121 AALAANVDVAALEKQKIGGAIRTDFILSAEIIAITLGTVAESSFTTQVLVLVGIALVMTI 180 Query: 178 GVYGVVAGIVKLDDGGLYLLRTGGAIGRRIGRAILVAAPYMMKSLTVIGTVAMFMVGGGI 237 GVYG+VAGIVKLDD GLYL + + +G AIL APY+MK L+V+G AMFMVGGGI Sbjct: 181 GVYGLVAGIVKLDDAGLYLSKRDSGFAQGLGGAILRTAPYLMKGLSVVGMAAMFMVGGGI 240 Query: 238 LTHGFAPVHHWIADVSAPLAAVPAIGGLLSVLAPSALDAVFGVVAGGAVLLLVTLMQRVL 297 LTHG VHH I + +A + +G LL+ + P+ L+ +FG+VAG VL V L++R+L Sbjct: 241 LTHGIPVVHHAIEQAAQSVAGIATLGPLLAAITPTLLNFLFGIVAGAVVLAGVLLVKRLL 300 Query: 298 KVFKK 302 KK Sbjct: 301 PKKKK 305