BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0074.p (213 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773842.1| hypothetical protein Hsero_0409 [Herbaspiril... 334 6e-90 ref|YP_001351994.1| phospholipid-binding protein [Janthinobacter... 322 3e-86 ref|YP_001098608.1| toluene-induced BbsI protein [Herminiimonas ... 306 1e-81 gb|EGW61700.1| PEBP family protein [Dechlorosoma suillum PS] 304 4e-81 ref|YP_582574.1| phospholipid-binding protein [Cupriavidus metal... 303 1e-80 >ref|YP_003773842.1| hypothetical protein Hsero_0409 [Herbaspirillum seropedicae SmR1] emb|CAM32649.1| Conserved Hypothetical [Herbaspirillum seropedicae] gb|ADJ61934.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 215 Score = 334 bits (856), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 156/212 (73%), Positives = 177/212 (83%) Query: 1 MKLWSDSFQDGAVIPGEFTFAVPDPKSHVALSSNRNPHLAWSDLPPGTRSLVLVMHDPDV 60 MK WSDSF+DGA IPGEF FAV DPK+HVALS NRNPH AWS+LP GT+SL LV+HDPDV Sbjct: 1 MKFWSDSFKDGATIPGEFAFAVMDPKTHVALSGNRNPHFAWSELPAGTKSLALVVHDPDV 60 Query: 61 PSRGDDVNQEGKTVPADLPRVDFFHWTLVDIPPGVSELAAGQFSSAVTTRGKAGPAIPGD 120 PSRGDDVNQEGKTVP +LPRVDF+HWTLVDIP V+E+ AGQFS+ VT RGK GPA+ G+ Sbjct: 61 PSRGDDVNQEGKTVPLELPRVDFYHWTLVDIPASVTEIKAGQFSNGVTARGKPGPAVLGE 120 Query: 121 PLSGARHGLNDYTSWFAGDGDMSGDYFGYDGPCPPWNDAIAHRYIFTLYAIDQEQLTVTG 180 + GAR G+NDYT WFAGDGDM GDYFGYDGPCPPWNDA+ HRYIFTLYA+D EQL V G Sbjct: 121 VMPGARQGINDYTGWFAGDGDMRGDYFGYDGPCPPWNDALVHRYIFTLYALDVEQLPVAG 180 Query: 181 KFTGTDVRNALQGHVLGQAAITGTYTLNPDLI 212 G+ V AL+ HVL QA+ITG YTLNP+ + Sbjct: 181 NLEGSVVVTALRDHVLEQASITGLYTLNPNAV 212 >ref|YP_001351994.1| phospholipid-binding protein [Janthinobacterium sp. Marseille] gb|ABR90253.1| phospholipid-binding protein [Janthinobacterium sp. Marseille] Length = 215 Score = 322 bits (824), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 146/212 (68%), Positives = 174/212 (82%) Query: 1 MKLWSDSFQDGAVIPGEFTFAVPDPKSHVALSSNRNPHLAWSDLPPGTRSLVLVMHDPDV 60 MKLWSDSF+DGA IPGEF F V P +HV LS+N+NPHLAWS LP T+SL L++HDPDV Sbjct: 1 MKLWSDSFKDGATIPGEFAFCVIAPATHVTLSANKNPHLAWSGLPAATKSLALIVHDPDV 60 Query: 61 PSRGDDVNQEGKTVPADLPRVDFFHWTLVDIPPGVSELAAGQFSSAVTTRGKAGPAIPGD 120 PSRGDDVNQEGKTVPADLPRVDFFHWTLVD+PP ++AAG F+ VT RGK+GPAI Sbjct: 61 PSRGDDVNQEGKTVPADLPRVDFFHWTLVDLPPDTQQIAAGSFAHGVTPRGKSGPAIANS 120 Query: 121 PLSGARHGLNDYTSWFAGDGDMSGDYFGYDGPCPPWNDAIAHRYIFTLYAIDQEQLTVTG 180 P+ GARHG+NDYT WFA D DM+G YFGYDGPCPPWNDAI HRY+FTLYA+D + V G Sbjct: 121 PVPGARHGINDYTGWFAQDVDMAGAYFGYDGPCPPWNDAIVHRYVFTLYALDIASVPVDG 180 Query: 181 KFTGTDVRNALQGHVLGQAAITGTYTLNPDLI 212 +F+G VR+A+ GHVL +A+++ +YTLNP L+ Sbjct: 181 QFSGQQVRDAIAGHVLAEASVSASYTLNPTLV 212 >ref|YP_001098608.1| toluene-induced BbsI protein [Herminiimonas arsenicoxydans] emb|CAL60479.1| Putative phospholipid binding protein, possible toluene-induced [Herminiimonas arsenicoxydans] Length = 221 Score = 306 bits (785), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 144/213 (67%), Positives = 167/213 (78%), Gaps = 4/213 (1%) Query: 1 MKLWSDSFQDGAVIPGEFTFAVPDPKSHVALSSNRNPHLAWSDLPPGTRSLVLVMHDPDV 60 MKLWSD+F+DGA IPG F V DP +HVALS+N+NPHLAWSD+P GT+SL L++HDPDV Sbjct: 2 MKLWSDTFKDGAAIPGACAFCVIDPVTHVALSANQNPHLAWSDVPAGTKSLALIVHDPDV 61 Query: 61 PSRGDDVNQEGKTVPADLPRVDFFHWTLVDIPPGVSELAAGQFSSAVTTRGKAGPAIPGD 120 PSRGDDVNQEGKTVPADLPRVDFFHW LVD+PP + + A FS VT RGK+GPAI Sbjct: 62 PSRGDDVNQEGKTVPADLPRVDFFHWVLVDVPPDTTHIDAASFSDGVTPRGKSGPAISAS 121 Query: 121 PLSGA----RHGLNDYTSWFAGDGDMSGDYFGYDGPCPPWNDAIAHRYIFTLYAIDQEQL 176 P+ GA R GLNDYT WFA D M+GDYFGYDGPCPPWNDAI HRY+FTLYA+D +L Sbjct: 122 PIDGAQINPRQGLNDYTGWFAQDAQMAGDYFGYDGPCPPWNDAIVHRYVFTLYALDIARL 181 Query: 177 TVTGKFTGTDVRNALQGHVLGQAAITGTYTLNP 209 + GKF G R+A+ GHVL QA++ G Y LNP Sbjct: 182 PLNGKFGGAQARDAVAGHVLAQASLCGWYGLNP 214 >gb|EGW61700.1| PEBP family protein [Dechlorosoma suillum PS] Length = 209 Score = 304 bits (779), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 141/211 (66%), Positives = 164/211 (77%), Gaps = 4/211 (1%) Query: 1 MKLWSDSFQDGAVIPGEFTFAVPDPKSHVALSSNRNPHLAWSDLPPGTRSLVLVMHDPDV 60 MKL S SF DG IPGEF F +P + HV L N NPHL WSD+P GTRS L+ HDPDV Sbjct: 1 MKLESKSFSDGQPIPGEFAFCIPHAQHHVCLGGNHNPHLRWSDVPIGTRSFALICHDPDV 60 Query: 61 PSRGDDVNQEGKTVPADLPRVDFFHWTLVDIPPGVSELAAGQFSSAVTTRGKAGPAIPGD 120 PS GDDVNQEG++VPADLPRVDFFHW L DI E+ AG+F S VT RGK GPA Sbjct: 61 PSTGDDVNQEGRSVPADLPRVDFFHWVLTDISAMRREIRAGEFCSEVTPRGKPGPA---- 116 Query: 121 PLSGARHGLNDYTSWFAGDGDMSGDYFGYDGPCPPWNDAIAHRYIFTLYAIDQEQLTVTG 180 L G+RHG+NDYT WFAGDGDMSGDY+GYDGPCPPWNDA+ HRY+FT+YA+D EQL VTG Sbjct: 117 SLEGSRHGINDYTGWFAGDGDMSGDYYGYDGPCPPWNDALRHRYVFTIYALDVEQLPVTG 176 Query: 181 KFTGTDVRNALQGHVLGQAAITGTYTLNPDL 211 +F+G D+R A++GH+L QA +TGTY+LNP L Sbjct: 177 RFSGADLRQAMEGHILAQAQLTGTYSLNPAL 207 >ref|YP_582574.1| phospholipid-binding protein [Cupriavidus metallidurans CH34] gb|ABF07305.1| Phospholipid-binding protein [Cupriavidus metallidurans CH34] Length = 215 Score = 303 bits (776), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 143/215 (66%), Positives = 167/215 (77%), Gaps = 2/215 (0%) Query: 1 MKLWSDSFQDGAVIPGEFTFAVPDPKSHVALSSNRNPHLAWSDLPPGTRSLVLVMHDPDV 60 MKLWS +F D A IPGEF F VPD SHVALSSNRNP L W D+P TRS VL+ HD DV Sbjct: 1 MKLWSKAFADNAPIPGEFAFCVPDSASHVALSSNRNPDLHWDDVPAATRSFVLICHDRDV 60 Query: 61 PSRGDDVNQEGKTVPADLPRVDFFHWTLVDIPPGVSELAAGQFSSAVTTRGKAGP-AIPG 119 PS+GDDVNQEG+ VP LPRVDFFHW L+D+PPG+ ++AG S V RGK GP A+ G Sbjct: 61 PSKGDDVNQEGREVPESLPRVDFFHWVLIDVPPGLHTISAGSHSDGVIARGKPGPEALVG 120 Query: 120 DPLSGA-RHGLNDYTSWFAGDGDMSGDYFGYDGPCPPWNDAIAHRYIFTLYAIDQEQLTV 178 +G RHGLNDYT WFAGD DM GDYFGYDGPCPPWND+I H Y+FT+YA+D +++ V Sbjct: 121 TATAGGLRHGLNDYTGWFAGDADMKGDYFGYDGPCPPWNDSIIHHYVFTVYALDIDRVPV 180 Query: 179 TGKFTGTDVRNALQGHVLGQAAITGTYTLNPDLIK 213 GKFTG DVR A+QGHVL +A++TGTYTLNP L+K Sbjct: 181 EGKFTGADVRRAIQGHVLAEASLTGTYTLNPRLVK 215