BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0072.p (414 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773840.1| tyrosyl-tRNA synthetase [Herbaspirillum sero... 790 0.0 ref|YP_001098606.1| tyrosyl-tRNA synthetase [Herminiimonas arsen... 732 0.0 ref|YP_004754606.1| tyrosyl-tRNA synthetase [Collimonas fungivor... 731 0.0 ref|YP_001351992.1| tyrosyl-tRNA synthetase [Janthinobacterium s... 729 0.0 ref|ZP_08275030.1| Tyrosyl-tRNA synthetase [Oxalobacteraceae bac... 724 0.0 >ref|YP_003773840.1| tyrosyl-tRNA synthetase [Herbaspirillum seropedicae SmR1] gb|ADJ61932.1| tyrosyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1] Length = 453 Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust. Identities = 383/416 (92%), Positives = 399/416 (95%), Gaps = 3/416 (0%) Query: 1 MTAEQLTPQAP---LPLSDKVQEALAITKRGVDELLIESEFAQKLARAEKSGQPLRIKLG 57 M A+Q TP A +PLSDKV EALAITKRG+DELLIESEFAQKLARAE+SGQPLRIKLG Sbjct: 38 MNADQSTPTAAPSKMPLSDKVLEALAITKRGIDELLIESEFAQKLARAEQSGQPLRIKLG 97 Query: 58 LDPTAPDLHLGHTVVLNKMRQLQDLGHNVIFLIGDFTSMIGDPSGRNATRPPLTREQIEV 117 LDPTAPDLHLGHTVVLNKMRQLQ+LGH VIFLIGDFTSMIGDPSGRNATRPPL+REQIE+ Sbjct: 98 LDPTAPDLHLGHTVVLNKMRQLQNLGHQVIFLIGDFTSMIGDPSGRNATRPPLSREQIEI 157 Query: 118 NAKTYFAQASLVLDAAKTEIRYNSEWCDPLGSRGMIQLASRYTVARMMERDDFTKRFKEG 177 NAKTYFAQASLVLD +KTEIRYNSEWCD LGSRGMIQLASRYTVARMMERDDFTKRFKEG Sbjct: 158 NAKTYFAQASLVLDPSKTEIRYNSEWCDALGSRGMIQLASRYTVARMMERDDFTKRFKEG 217 Query: 178 TPISVHEFLYPLMQGYDSVALKSDLELGGTDQKFNLLVGRELQKDFGQEPQCILTMPLLE 237 TPISVHEFLYPLMQGYDSVALKSDLELGGTDQKFNLLVGRELQKDFGQEPQCILTMPLLE Sbjct: 218 TPISVHEFLYPLMQGYDSVALKSDLELGGTDQKFNLLVGRELQKDFGQEPQCILTMPLLE 277 Query: 238 GLDGVDKMSKSKNNYIGITEPANTMFAKVMSISDVMMWRYYELLSFRSIADIAGFKADVA 297 GLDGV+KMSKSK NYIGITEPANTMFAKVMSISDVMMWRYY+LLSFRS+A+IAG+KA+V Sbjct: 278 GLDGVEKMSKSKGNYIGITEPANTMFAKVMSISDVMMWRYYDLLSFRSMAEIAGYKAEVD 337 Query: 298 AGKNPRDIKVALAQEIVTRFHSQQAAEDALADFVNRSKGGIPDDVPEVSLTGAPLGIGQL 357 AGKNPRDIKVALAQEIV RFHSQQAAEDALADFVNRSKGGIPDD+PEVSLTGAPLGIGQL Sbjct: 338 AGKNPRDIKVALAQEIVARFHSQQAAEDALADFVNRSKGGIPDDIPEVSLTGAPLGIGQL 397 Query: 358 LKQTNLCASTSEALRMVEQGGVRIDGTVISDKGLKVEAGVFVVQVGKRKFARVTLS 413 LKQ NLCASTSEALRMVEQGGVRIDGTVISDKGLKVEAG VVQVGKRKFARVTL+ Sbjct: 398 LKQANLCASTSEALRMVEQGGVRIDGTVISDKGLKVEAGQCVVQVGKRKFARVTLA 453 >ref|YP_001098606.1| tyrosyl-tRNA synthetase [Herminiimonas arsenicoxydans] emb|CAL60477.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS) [Herminiimonas arsenicoxydans] Length = 413 Score = 732 bits (1889), Expect = 0.0, Method: Compositional matrix adjust. Identities = 345/402 (85%), Positives = 375/402 (93%) Query: 12 LPLSDKVQEALAITKRGVDELLIESEFAQKLARAEKSGQPLRIKLGLDPTAPDLHLGHTV 71 LPLSD VQEAL + KRGV+ELLIESEFAQKLAR+E+SG+PLRIKLGLDPTAPDLHLGHTV Sbjct: 12 LPLSDAVQEALTVAKRGVEELLIESEFAQKLARSEQSGKPLRIKLGLDPTAPDLHLGHTV 71 Query: 72 VLNKMRQLQDLGHNVIFLIGDFTSMIGDPSGRNATRPPLTREQIEVNAKTYFAQASLVLD 131 VLNKMRQLQDLGH VIFLIGDFTSMIGDPSGRN TRPPLT+EQI NAKTYF+QASLVLD Sbjct: 72 VLNKMRQLQDLGHQVIFLIGDFTSMIGDPSGRNITRPPLTKEQISENAKTYFSQASLVLD 131 Query: 132 AAKTEIRYNSEWCDPLGSRGMIQLASRYTVARMMERDDFTKRFKEGTPISVHEFLYPLMQ 191 A+TEIRYNSEWCDPLG+RGMI+L+++YTVAR++ER+DFTKRF+ TPIS+HEFLYPLMQ Sbjct: 132 PARTEIRYNSEWCDPLGARGMIELSAKYTVARILEREDFTKRFQSNTPISLHEFLYPLMQ 191 Query: 192 GYDSVALKSDLELGGTDQKFNLLVGRELQKDFGQEPQCILTMPLLEGLDGVDKMSKSKNN 251 GYDSVALKSDLELGGTDQKFNLLVGRELQK +GQE QCILTMPLLEGLDGV+KMSKSK N Sbjct: 192 GYDSVALKSDLELGGTDQKFNLLVGRELQKSYGQEQQCILTMPLLEGLDGVEKMSKSKGN 251 Query: 252 YIGITEPANTMFAKVMSISDVMMWRYYELLSFRSIADIAGFKADVAAGKNPRDIKVALAQ 311 YIGITEP NTMFAK+MSISDVMMWRYYELLSFRS+A+I F+ DV G+NPRD+KV LAQ Sbjct: 252 YIGITEPGNTMFAKLMSISDVMMWRYYELLSFRSLAEITQFRKDVEGGRNPRDVKVLLAQ 311 Query: 312 EIVTRFHSQQAAEDALADFVNRSKGGIPDDVPEVSLTGAPLGIGQLLKQTNLCASTSEAL 371 EIV RFHS QAAEDALADFVNRSKGGIPDD+PE++L+GAPLGIGQLLKQ NLCASTSEAL Sbjct: 312 EIVARFHSVQAAEDALADFVNRSKGGIPDDIPELALSGAPLGIGQLLKQANLCASTSEAL 371 Query: 372 RMVEQGGVRIDGTVISDKGLKVEAGVFVVQVGKRKFARVTLS 413 RMVEQGGVRIDG VISDK LKVEAG VVQVGKRKFARVTLS Sbjct: 372 RMVEQGGVRIDGAVISDKALKVEAGTVVVQVGKRKFARVTLS 413 >ref|YP_004754606.1| tyrosyl-tRNA synthetase [Collimonas fungivorans Ter331] gb|AEK63783.1| Tyrosyl-tRNA synthetase [Collimonas fungivorans Ter331] Length = 423 Score = 731 bits (1888), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/403 (85%), Positives = 378/403 (93%) Query: 11 PLPLSDKVQEALAITKRGVDELLIESEFAQKLARAEKSGQPLRIKLGLDPTAPDLHLGHT 70 PL LSD+ QEALAITKRGVDELLIES+FA+KL R+E+SG+PLRIKLGLDPTAPDLHLGHT Sbjct: 20 PLVLSDRTQEALAITKRGVDELLIESDFARKLQRSEQSGKPLRIKLGLDPTAPDLHLGHT 79 Query: 71 VVLNKMRQLQDLGHNVIFLIGDFTSMIGDPSGRNATRPPLTREQIEVNAKTYFAQASLVL 130 VVLNKMRQLQDLGHNVIFLIGDFTSMIGDPSGRN TRPPLTREQIE NAKTYFAQASLVL Sbjct: 80 VVLNKMRQLQDLGHNVIFLIGDFTSMIGDPSGRNVTRPPLTREQIEENAKTYFAQASLVL 139 Query: 131 DAAKTEIRYNSEWCDPLGSRGMIQLASRYTVARMMERDDFTKRFKEGTPISVHEFLYPLM 190 D A+TEIRYNSEW D LG+RGMIQL+++YTVAR++ER+DFTKR+K GTPISVHE LYPLM Sbjct: 140 DPARTEIRYNSEWSDQLGARGMIQLSAKYTVARILEREDFTKRYKAGTPISVHELLYPLM 199 Query: 191 QGYDSVALKSDLELGGTDQKFNLLVGRELQKDFGQEPQCILTMPLLEGLDGVDKMSKSKN 250 QGYDSVAL+SDLELGGTDQKFNLLVGRELQKD+GQEPQCILTMPLLEGLDGV+KMSKSK Sbjct: 200 QGYDSVALESDLELGGTDQKFNLLVGRELQKDYGQEPQCILTMPLLEGLDGVEKMSKSKG 259 Query: 251 NYIGITEPANTMFAKVMSISDVMMWRYYELLSFRSIADIAGFKADVAAGKNPRDIKVALA 310 NYIGITEP NTMFAK+MSISDVMMWRYYELLSF+S+A IA +KA V G+NPRDIKVAL Sbjct: 260 NYIGITEPGNTMFAKIMSISDVMMWRYYELLSFKSLAQIAAYKAQVEGGQNPRDIKVALG 319 Query: 311 QEIVTRFHSQQAAEDALADFVNRSKGGIPDDVPEVSLTGAPLGIGQLLKQTNLCASTSEA 370 QEIV RFH+QQAAEDAL+DF NR+KGGIPDD+PE++L+GAPLGIGQLLKQ NLC STSEA Sbjct: 320 QEIVARFHNQQAAEDALSDFNNRAKGGIPDDIPELTLSGAPLGIGQLLKQANLCPSTSEA 379 Query: 371 LRMVEQGGVRIDGTVISDKGLKVEAGVFVVQVGKRKFARVTLS 413 LRMVEQGGVRIDG V+SDKGLKV+A FV+QVGKRKFARVTL+ Sbjct: 380 LRMVEQGGVRIDGAVVSDKGLKVDAATFVIQVGKRKFARVTLT 422 >ref|YP_001351992.1| tyrosyl-tRNA synthetase [Janthinobacterium sp. Marseille] gb|ABR89088.1| tyrosyl-tRNA synthetase [Janthinobacterium sp. Marseille] Length = 413 Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/402 (85%), Positives = 375/402 (93%) Query: 12 LPLSDKVQEALAITKRGVDELLIESEFAQKLARAEKSGQPLRIKLGLDPTAPDLHLGHTV 71 LPLSDKVQEAL + KRGV+ELLIESEFAQKLAR+E++G+PLRIKLGLDPTAPDLHLGHTV Sbjct: 12 LPLSDKVQEALTVAKRGVEELLIESEFAQKLARSEQTGKPLRIKLGLDPTAPDLHLGHTV 71 Query: 72 VLNKMRQLQDLGHNVIFLIGDFTSMIGDPSGRNATRPPLTREQIEVNAKTYFAQASLVLD 131 VLNKMRQLQDLGH VIFLIGDFTSMIGDPSGRN TRPPLT+EQIE NAKTYF+QASLVLD Sbjct: 72 VLNKMRQLQDLGHQVIFLIGDFTSMIGDPSGRNITRPPLTKEQIEENAKTYFSQASLVLD 131 Query: 132 AAKTEIRYNSEWCDPLGSRGMIQLASRYTVARMMERDDFTKRFKEGTPISVHEFLYPLMQ 191 +TEIRYNSEWCDPLG+RGMI+L+++YTVAR++ER+DFTKRFK TPIS+HEFLYPLMQ Sbjct: 132 PERTEIRYNSEWCDPLGARGMIELSAKYTVARILEREDFTKRFKANTPISLHEFLYPLMQ 191 Query: 192 GYDSVALKSDLELGGTDQKFNLLVGRELQKDFGQEPQCILTMPLLEGLDGVDKMSKSKNN 251 GYDSVAL+SDLELGGTDQKFNLLVGRELQK +GQE QCILTMPLLEGLDGV+KMSKSK N Sbjct: 192 GYDSVALQSDLELGGTDQKFNLLVGRELQKSYGQEQQCILTMPLLEGLDGVEKMSKSKGN 251 Query: 252 YIGITEPANTMFAKVMSISDVMMWRYYELLSFRSIADIAGFKADVAAGKNPRDIKVALAQ 311 YIGITEP NTMFAK+MSISDVMMWRYYELLSFRS+++IA FK +V G+NPRDIKV LAQ Sbjct: 252 YIGITEPGNTMFAKLMSISDVMMWRYYELLSFRSLSEIAQFKKEVEGGRNPRDIKVLLAQ 311 Query: 312 EIVTRFHSQQAAEDALADFVNRSKGGIPDDVPEVSLTGAPLGIGQLLKQTNLCASTSEAL 371 EIV RFHS QA EDAL DFVNRSKGGIP D+PEV+L+GAPLGIGQLLKQ NLCASTSEAL Sbjct: 312 EIVARFHSVQAGEDALTDFVNRSKGGIPHDIPEVALSGAPLGIGQLLKQANLCASTSEAL 371 Query: 372 RMVEQGGVRIDGTVISDKGLKVEAGVFVVQVGKRKFARVTLS 413 RMVEQGGVRIDG VISDKGLKVEAG VVQVGKRKFARVTL+ Sbjct: 372 RMVEQGGVRIDGAVISDKGLKVEAGTLVVQVGKRKFARVTLA 413 >ref|ZP_08275030.1| Tyrosyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480] gb|EGF31486.1| Tyrosyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480] Length = 424 Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust. Identities = 346/405 (85%), Positives = 372/405 (91%) Query: 9 QAPLPLSDKVQEALAITKRGVDELLIESEFAQKLARAEKSGQPLRIKLGLDPTAPDLHLG 68 Q L L++ VQ ALAITKRGVDELLIESEFAQKLAR+E +G+PLRIKLGLDPTAPDLHLG Sbjct: 20 QPTLVLTESVQHALAITKRGVDELLIESEFAQKLARSELTGKPLRIKLGLDPTAPDLHLG 79 Query: 69 HTVVLNKMRQLQDLGHNVIFLIGDFTSMIGDPSGRNATRPPLTREQIEVNAKTYFAQASL 128 HTVVLNKMRQLQDLGH VIFLIGDFTSMIGDPSGRN TRP LT+EQIE NAKTYFAQASL Sbjct: 80 HTVVLNKMRQLQDLGHTVIFLIGDFTSMIGDPSGRNITRPALTKEQIEDNAKTYFAQASL 139 Query: 129 VLDAAKTEIRYNSEWCDPLGSRGMIQLASRYTVARMMERDDFTKRFKEGTPISVHEFLYP 188 VLDA +TEIRYNSEWCDPLG+RGMIQL+S+YTVAR++ER+DFTKRFK GTPISVHE LYP Sbjct: 140 VLDAERTEIRYNSEWCDPLGARGMIQLSSKYTVARILEREDFTKRFKAGTPISVHELLYP 199 Query: 189 LMQGYDSVALKSDLELGGTDQKFNLLVGRELQKDFGQEPQCILTMPLLEGLDGVDKMSKS 248 LMQGYDSVAL +DLELGGTDQKFNLLVGRELQKD+GQEPQCILTMPLLEGLDGV+KMSKS Sbjct: 200 LMQGYDSVALHADLELGGTDQKFNLLVGRELQKDWGQEPQCILTMPLLEGLDGVEKMSKS 259 Query: 249 KNNYIGITEPANTMFAKVMSISDVMMWRYYELLSFRSIADIAGFKADVAAGKNPRDIKVA 308 K NYI ITEPAN+MFAKVMSISD MMWRYYELLS RS+A++A FK DV G+NPRDIKVA Sbjct: 260 KGNYISITEPANSMFAKVMSISDTMMWRYYELLSARSLAELAQFKTDVEGGRNPRDIKVA 319 Query: 309 LAQEIVTRFHSQQAAEDALADFVNRSKGGIPDDVPEVSLTGAPLGIGQLLKQTNLCASTS 368 LAQEIVTRFH+QQA DALADF NR++GGIPDD+PEV L GAPLGIGQLLKQ NLCASTS Sbjct: 320 LAQEIVTRFHNQQAGVDALADFDNRARGGIPDDIPEVQLGGAPLGIGQLLKQANLCASTS 379 Query: 369 EALRMVEQGGVRIDGTVISDKGLKVEAGVFVVQVGKRKFARVTLS 413 EALRMVEQ GVRIDG ISDK LKVEAG FV+QVGKRKFARVTLS Sbjct: 380 EALRMVEQNGVRIDGVAISDKALKVEAGTFVLQVGKRKFARVTLS 424