BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0057.p (177 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004751437.1| C-type cytochrome biogenesis protein ResA (t... 245 2e-63 ref|YP_003773824.1| thioredoxin-related transmembrane protein [H... 241 3e-62 ref|YP_001100998.1| thioredoxin-related transmembrane protein [H... 219 1e-55 ref|YP_001354659.1| thioredoxin-related transmembrane protein [J... 213 7e-54 ref|ZP_08276260.1| thioredoxin (transmembrane-like protein) [Oxa... 184 6e-45 >ref|YP_004751437.1| C-type cytochrome biogenesis protein ResA (thioredoxin) [Collimonas fungivorans Ter331] gb|AEK60614.1| C-type cytochrome biogenesis protein ResA (thioredoxin) [Collimonas fungivorans Ter331] Length = 174 Score = 245 bits (625), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 117/176 (66%), Positives = 143/176 (81%), Gaps = 4/176 (2%) Query: 1 MKKRNYLLFVLIAIIAAGVGVYTSHKQNQPAPQTPEARAVANLFAQTMPDAAGKPQALSQ 60 M KRN L+FV IAI+ +GVY +++ PA PE+ AVA L AQ MPDA+GK ALSQ Sbjct: 1 MMKRNILIFVPIAILFCAIGVYFGMQRHTPA--APESVAVAALLAQEMPDASGKASALSQ 58 Query: 61 WKGKPLIINFWATWCAPCVEEMPELAALQAEVAP--VQIIGIGVDSQENIAQFAEKFHIY 118 WKGKPL++NFWATWCAPCVEEMPEL ALQ E+A +Q++GIG+DS +NIA+FA+K+ I Sbjct: 59 WKGKPLVVNFWATWCAPCVEEMPELNALQTEIAAKNIQVVGIGIDSADNIAKFADKYKIS 118 Query: 119 YPLYVAGTGATDLLRQFGNQAGGLPFTVLVGLDGNLKKVYLGRLNFDELRRDLASL 174 YPLY+AGTGAT LLRQFGNQ+GGLPFTVL+G DG +KK+YLG + FDELR+DLA L Sbjct: 119 YPLYLAGTGATALLRQFGNQSGGLPFTVLIGRDGAVKKMYLGSIKFDELRKDLALL 174 >ref|YP_003773824.1| thioredoxin-related transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ61916.1| thioredoxin-related transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 173 Score = 241 bits (616), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 117/175 (66%), Positives = 148/175 (84%), Gaps = 3/175 (1%) Query: 1 MKK-RNYLLFVLIAIIAAGVGVYTSHKQNQPAPQTPEARAVANLFAQTMPDAAGKPQALS 59 MKK RN +L ++A++ G+G+Y SH+ + PA ++ E +A+ L AQ++PDA G+ Q+L+ Sbjct: 1 MKKLRNVILLAVVAVVCVGIGLYASHRAH-PA-ESAETQALNRLLAQSLPDATGQMQSLA 58 Query: 60 QWKGKPLIINFWATWCAPCVEEMPELAALQAEVAPVQIIGIGVDSQENIAQFAEKFHIYY 119 Q++GKPLI+NFWATWC PCVEEMPEL ALQ E+APVQI+GIGVDSQENI +FA+K+ I Y Sbjct: 59 QYRGKPLIVNFWATWCGPCVEEMPELTALQQEIAPVQILGIGVDSQENIGKFAQKYQIRY 118 Query: 120 PLYVAGTGATDLLRQFGNQAGGLPFTVLVGLDGNLKKVYLGRLNFDELRRDLASL 174 PL+VAGTGATDLLRQFGNQAGGLPFT LVG DGN+KK+YLGRL FDELR+DL+ L Sbjct: 119 PLFVAGTGATDLLRQFGNQAGGLPFTALVGKDGNVKKIYLGRLKFDELRQDLSQL 173 >ref|YP_001100998.1| thioredoxin-related transmembrane protein [Herminiimonas arsenicoxydans] emb|CAL62877.1| Putative thioredoxin [Herminiimonas arsenicoxydans] Length = 173 Score = 219 bits (558), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 102/174 (58%), Positives = 133/174 (76%), Gaps = 4/174 (2%) Query: 3 KRNYLLFVLIAIIAAGVGVYTSHKQNQPAPQTPEARAVANLFAQTMPDAAGKPQALSQWK 62 KRN +F + A++ AG+G+Y ++ + PA PE+ AVA FAQ + DA GK ALSQW+ Sbjct: 2 KRNVFVFGIFALVFAGIGIYFGNRHHTPA--APESPAVATFFAQQLEDADGKTHALSQWQ 59 Query: 63 GKPLIINFWATWCAPCVEEMPELAALQAEVAP--VQIIGIGVDSQENIAQFAEKFHIYYP 120 GK LI+NFWATWCAPCVEEMPEL ALQ E+AP +QI+G+G+D+ NI +FA K+ I YP Sbjct: 60 GKTLIVNFWATWCAPCVEEMPELTALQTELAPQGIQILGLGIDNPSNIREFAAKYKISYP 119 Query: 121 LYVAGTGATDLLRQFGNQAGGLPFTVLVGLDGNLKKVYLGRLNFDELRRDLASL 174 LY+AG T+L RQFGNQAGGLPFTV++G +G++KK YLGRL ++LR D+ SL Sbjct: 120 LYIAGMTGTELSRQFGNQAGGLPFTVIIGPNGDIKKTYLGRLKMEQLRADIHSL 173 >ref|YP_001354659.1| thioredoxin-related transmembrane protein [Janthinobacterium sp. Marseille] gb|ABR91198.1| thioredoxin-related transmembrane protein [Janthinobacterium sp. Marseille] Length = 173 Score = 213 bits (543), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 101/174 (58%), Positives = 128/174 (73%), Gaps = 4/174 (2%) Query: 3 KRNYLLFVLIAIIAAGVGVYTSHKQNQPAPQTPEARAVANLFAQTMPDAAGKPQALSQWK 62 KRN LLF IA+ A +G+Y K + PA PE+ AVA FAQ M D+AGK L +W+ Sbjct: 2 KRNVLLFGAIAVFFAAIGIYFGDKHHSPA--APESPAVATFFAQQMEDSAGKMHTLGEWQ 59 Query: 63 GKPLIINFWATWCAPCVEEMPELAALQAEVAP--VQIIGIGVDSQENIAQFAEKFHIYYP 120 GK LI+NFWATWCAPCVEEMPEL LQ E+A +QI+G+G+DS NI +FA K+ I YP Sbjct: 60 GKTLIVNFWATWCAPCVEEMPELTELQTELAGKNIQILGVGIDSPSNIREFAAKYKITYP 119 Query: 121 LYVAGTGATDLLRQFGNQAGGLPFTVLVGLDGNLKKVYLGRLNFDELRRDLASL 174 LY+AG ++L RQFGNQAGGLPFTV++G G+++K YLGRL D+LR D+A+L Sbjct: 120 LYIAGLTGSELSRQFGNQAGGLPFTVIIGPKGDVRKTYLGRLKMDQLRADIAAL 173 >ref|ZP_08276260.1| thioredoxin (transmembrane-like protein) [Oxalobacteraceae bacterium IMCC9480] gb|EGF30270.1| thioredoxin (transmembrane-like protein) [Oxalobacteraceae bacterium IMCC9480] Length = 173 Score = 184 bits (466), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 82/146 (56%), Positives = 107/146 (73%), Gaps = 2/146 (1%) Query: 31 APQTPEARAVANLFAQTMPDAAGKPQALSQWKGKPLIINFWATWCAPCVEEMPELAALQA 90 AP P+ AVANLF T+ D + Q ++QWKG+ L++NFWATWCAPCVEEMPEL+ L Sbjct: 28 APAAPQTAAVANLFGMTLADLKEQEQPMAQWKGQTLLVNFWATWCAPCVEEMPELSTLHT 87 Query: 91 EVA--PVQIIGIGVDSQENIAQFAEKFHIYYPLYVAGTGATDLLRQFGNQAGGLPFTVLV 148 E+A +IGIG+DS ++ +FA K + YPLYV G G ++L RQFGNQAGGLPF+VL+ Sbjct: 88 ELAGKSFHVIGIGIDSPSSLREFALKLPVSYPLYVGGMGGSELTRQFGNQAGGLPFSVLI 147 Query: 149 GLDGNLKKVYLGRLNFDELRRDLASL 174 DG ++K YLGRLN E+RRD+A + Sbjct: 148 SSDGQVRKTYLGRLNMQEVRRDIAGM 173