BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0052.p (431 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773819.1| transmembrane protein [Herbaspirillum serope... 290 3e-76 ref|YP_004751432.1| putative transmembrane protein [Collimonas f... 253 4e-65 ref|YP_001354664.1| hypothetical protein mma_2974 [Janthinobacte... 248 2e-63 ref|YP_001101003.1| putative transmembrane protein [Herminiimona... 175 1e-41 ref|ZP_08276254.1| putative transmembrane protein [Oxalobacterac... 126 6e-27 >ref|YP_003773819.1| transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ61911.1| transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 429 Score = 290 bits (743), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 189/445 (42%), Positives = 252/445 (56%), Gaps = 30/445 (6%) Query: 1 MALATQCPFCQTTFRVAQDQLKLRGGLVRCGACKEVFNGNDHLVAPEIAQQLVVAPSTPA 60 MALATQCP C T FRV DQLKLRGGLVRCG+C++VFNGND+LV +A PA Sbjct: 1 MALATQCPHCLTIFRVVSDQLKLRGGLVRCGSCRQVFNGNDYLVEASVAD----GHYQPA 56 Query: 61 APPRSTESAEPHAPLGWPPLPGSPPVPPVQVATAPTSPAAEPSAPA-APPPWMATANLSA 119 ++ + P P P P A PA +PSAP A P TA +SA Sbjct: 57 PGSKAQAGVMTPSAAAAPATPTPAPSPVPASPMATRGPAPQPSAPVHAIPVSSGTAPVSA 116 Query: 120 AFASIAAETNDAPWGAPPVPKNEAPDAAPATAQETTPEPAPPVSFPLPGSPTTAPASAD- 178 P P + A P + P P P G+P +PA+ D Sbjct: 117 EPPPPVQVPAPVPAAIPVI-------AEPKVFRS----PTSPGYIPDLGAPLKSPAAVDK 165 Query: 179 ------NAASPLAAPDASINTLTQALSYPIPQTSSVVLTDVGASETQAEA--AAVLTPKQ 230 +A P D I T + + ++SS V A++ A A ++ Sbjct: 166 DKRDEADALPPFPVAD-EIPTAPAGGAALLRRSSSTDDEIVSAADIDAAFGPATSRLDEE 224 Query: 231 QAHEEAGAEEELEE----EEEEAEETEDDEDAPAFVQKAERRERLGRIVRVVMIVGAVIL 286 H G E+E ++ + A+++EDD + P FV++ ERRER GR+++V+M++ A ++ Sbjct: 225 DVHHLRGHEDEPDQLSAADHSAADDSEDDAELPGFVRRVERRERAGRVLKVIMMILAGVM 284 Query: 287 GIALLLQATYVWRNTIAAWLPSTRPLLAAACAPLHCSVGLPTSIDQLVLESSELQLVPPN 346 LLLQA Y WRN +A LP RP+L C LHCSVGLP ID+L LE++ELQ+VPPN Sbjct: 285 VPVLLLQALYYWRNPLAEALPPVRPMLNGMCVALHCSVGLPAEIDRLSLEANELQVVPPN 344 Query: 347 QNIYALSALLRNRGYGAQAWPYLELTLNDGDEKAIMRRVFTPREYLGSTKLVDSGLAGEG 406 QN+YAL+ ++RNRG GAQAWP+LELTLN+ DEKA++RRVF PR+YL + + +D G+A + Sbjct: 345 QNVYALTVVMRNRGPGAQAWPHLELTLNNDDEKAVVRRVFRPRDYLPNARQIDRGIAADS 404 Query: 407 EQQIKLTFELTQPAASGYRIYLFYP 431 EQQIKL FEL SGYR+YLFYP Sbjct: 405 EQQIKLNFELKDALVSGYRVYLFYP 429 >ref|YP_004751432.1| putative transmembrane protein [Collimonas fungivorans Ter331] gb|AEK60609.1| putative transmembrane protein [Collimonas fungivorans Ter331] Length = 462 Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 177/471 (37%), Positives = 232/471 (49%), Gaps = 49/471 (10%) Query: 1 MALATQCPFCQTTFRVAQDQLKLRGGLVRCGACKEVFNGNDHLVAPEIAQQLVVAPST-- 58 MALATQCP CQTTFRVA DQLKLRGGLVRCG+C+EVFNG +HLV P++A + Sbjct: 1 MALATQCPHCQTTFRVANDQLKLRGGLVRCGSCREVFNGIEHLVRPDVAVPIAAPAPATA 60 Query: 59 ---PAAPPRSTESAEPHAPLGWPPLPGSPPV-----------------PPVQVATAPTSP 98 A ++ A APL P PPV P V +AT P Sbjct: 61 SEQDAVTLQTHGFAADEAPLAEPQHSAPPPVYVAPEPEPTPEPISGPEPAVAIATNHPLP 120 Query: 99 AAEPSA-PAAPPPWMATANLSAAFASIAAETNDAPWGAPPVPKNEAPDAAPATAQET--- 154 P+A P MA+ + AA + + A E +APA T Sbjct: 121 VIAPAAAPETAGRSMASGRVEAAIDGLEEDLRIA---------EETSQSAPADVHHTPFG 171 Query: 155 ----TPEPAPPVSFPLPGSPTTAPASADNAASPLAA-----PDASINTLTQALSYPIPQT 205 + AP + P +P AD+ A A + TQA T Sbjct: 172 LIKPSAATAPDEAASNPPTPNVWHRHADDEEDKQIARMTLMHVAGQDDYTQAAKAESGAT 231 Query: 206 SSVVLTDVGASETQ-----AEAAAVLTPKQQAHEEAGAEEELEEEEEEAEETEDDEDAPA 260 + D E Q AE A + + + ++ E E D P Sbjct: 232 ADDDELDRIIDELQRKPWRAEKTPAAANPSNAADSGDGSNKKKSRDKNPAEPEPAADEPD 291 Query: 261 FVQKAERRERLGRIVRVVMIVGAVILGIALLLQATYVWRNTIAAWLPSTRPLLAAACAPL 320 FV A RR+R+G +R M +L I L Q+TY +R+ +AA +P +P+L ACA + Sbjct: 292 FVLSARRRQRIGGTLRWAMWGAGALLLIGLAGQSTYFFRDQLAARVPQLKPVLIGACAKI 351 Query: 321 HCSVGLPTSIDQLVLESSELQLVPPNQNIYALSALLRNRGYGAQAWPYLELTLNDGDEKA 380 CSVGLP ID + +E++ELQ V P +N+++L+ LLRNR QAWP +ELTLNDG+EKA Sbjct: 352 GCSVGLPMKIDSISIEANELQAVDPARNLFSLNLLLRNRSDTVQAWPNIELTLNDGNEKA 411 Query: 381 IMRRVFTPREYLGSTKLVDSGLAGEGEQQIKLTFELTQPAASGYRIYLFYP 431 I RRVFTP +YL +T G A + EQ +KL FEL Q ASGYR+YL+YP Sbjct: 412 IARRVFTPHDYLSATANPAQGFASDQEQPVKLGFELLQLKASGYRVYLYYP 462 >ref|YP_001354664.1| hypothetical protein mma_2974 [Janthinobacterium sp. Marseille] gb|ABR91179.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 413 Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 161/436 (36%), Positives = 221/436 (50%), Gaps = 51/436 (11%) Query: 1 MALATQCPFCQTTFRVAQDQLKLRGGLVRCGACKEVFNGNDHLVAPEIAQQLVVAPSTPA 60 MALATQCP CQTTFRVA DQLKLR GLVRCG CKE+FNG ++L+ E P++ A Sbjct: 24 MALATQCPHCQTTFRVAHDQLKLRAGLVRCGYCKEIFNGIENLLPSE-------DPASAA 76 Query: 61 APPRSTESAEPHAPLGWPPLPGSPPVPPVQVATAPTSPAAEPSAPAAPPPWMATANLSA- 119 +T +AE VQV A +P E A P +A +N S Sbjct: 77 PAVPATTNAE---------------TTEVQVQAAAVAPEIEQDANEDSAPAIADSNESTP 121 Query: 120 --AFASIAAETNDAPWGAPPVPK--NEAPDAAPATAQETTPEPAPPVSFPLPGSPTTAPA 175 + +A+T + AP K + P A P+PA + P P Sbjct: 122 DEPDETASADTEEPVAEAPAASKIDFDIPAGFERDADVYVPDPAYEAN--KPEDPLQRMT 179 Query: 176 SADNAASPLAAPDASINTLTQALSYPIPQTSSVVLTDVGASETQAEAAAVLTPKQQAHEE 235 D PD IN A +Y P + D+ + + Q A +E Sbjct: 180 LLDFTRD---LPD-EINAENTASTYD-PNELDQAINDLQRKPWRRSRKSAQAATQDALDE 234 Query: 236 AGAEEELEEEEEEAEETEDDEDAPAFVQKAERRERLGRIVRVVMIVGAVILGIALLLQAT 295 A++E P F+++ R++RL R +R+ + + IL IA LLQ Sbjct: 235 VDADDE-----------------PDFLKRGRRKQRLSRKLRIFLGISCFILLIAALLQGI 277 Query: 296 YVWRNTIAAWLPSTRPLLAAACAPLHCSVGLPTSIDQLVLESSELQLVPPNQNIYALSAL 355 YV+RN IA W P +P+L C L C + LP IDQ+ +ESSELQ + N++ + L+ L Sbjct: 278 YVFRNQIAGWFPQAKPILIQTCELLGCRIDLPAQIDQVSIESSELQTLANNKDTFVLTTL 337 Query: 356 LRNRGYGAQAWPYLELTLNDGDEKAIMRRVFTPREYLGSTKLVDSGLAGEGEQQIKLTFE 415 LRN Q WP++ELTLND +EK ++RRVFTP +YL +++ V G + E+ +KL+FE Sbjct: 338 LRNYSSTYQEWPHIELTLNDINEKPLLRRVFTPDDYLHNSEDVRIGFSANSERSVKLSFE 397 Query: 416 LTQPAASGYRIYLFYP 431 LTQ ASGYR+YLFYP Sbjct: 398 LTQLKASGYRVYLFYP 413 >ref|YP_001101003.1| putative transmembrane protein [Herminiimonas arsenicoxydans] emb|CAL62882.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans] Length = 400 Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 80/173 (46%), Positives = 115/173 (66%), Gaps = 1/173 (0%) Query: 259 PAFVQKAERRERLGRIVRVVMIVGAVILGIALLLQATYVWRNTIAAWLPSTRPLLAAACA 318 PAF+++A R+++LG +R ++ +G +IL +A L Q TY++RN IA P T+PLL C Sbjct: 229 PAFLKRARRKQKLGGKLRTLLGMGCLILFLAALAQGTYLFRNQIAGQFPQTKPLLTQLCD 288 Query: 319 PLHCSVGLPTSIDQLVLESSELQLVPPNQNIYALSALLRNRGYGAQAWPYLELTLNDGDE 378 C + LP I + +ESSELQ + N++ + L+ LLRN Q WP++ELTLND +E Sbjct: 289 VFACRIDLPAQIAAVSIESSELQTLAENKDTFVLTTLLRNYSESLQTWPHIELTLNDANE 348 Query: 379 KAIMRRVFTPREYLGSTKLVDSGLAGEGEQQIKLTFELTQPAASGYRIYLFYP 431 K ++RRVF P +YL + + V +G A E +KL+FEL Q ASGYR+YLFYP Sbjct: 349 KPLLRRVFAPADYLSAAE-VRAGFAASSEHAVKLSFELAQIKASGYRVYLFYP 400 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 36/46 (78%), Positives = 39/46 (84%) Query: 1 MALATQCPFCQTTFRVAQDQLKLRGGLVRCGACKEVFNGNDHLVAP 46 MALATQCP CQTTFRV DQLKLR GLVRCG CKE+FNG +HL+ P Sbjct: 1 MALATQCPHCQTTFRVVHDQLKLRAGLVRCGHCKEIFNGIEHLLPP 46 >ref|ZP_08276254.1| putative transmembrane protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF30274.1| putative transmembrane protein [Oxalobacteraceae bacterium IMCC9480] Length = 353 Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 66/139 (47%), Positives = 82/139 (58%) Query: 293 QATYVWRNTIAAWLPSTRPLLAAACAPLHCSVGLPTSIDQLVLESSELQLVPPNQNIYAL 352 Q YV R+ IAA LP+T+P L AC C + L Q+ +ESSEL + P N + L Sbjct: 215 QTVYVLRDQIAARLPATKPWLVKACTLWDCRIALLAQASQVSIESSELITLNPAANTFTL 274 Query: 353 SALLRNRGYGAQAWPYLELTLNDGDEKAIMRRVFTPREYLGSTKLVDSGLAGEGEQQIKL 412 + LLRN Q WP LELTL DG + + RRVFT +YL + DSG A EQ ++ Sbjct: 275 NLLLRNSSPFPQRWPALELTLLDGSGRPVSRRVFTAADYLPQAPVADSGFAAGSEQSARI 334 Query: 413 TFELTQPAASGYRIYLFYP 431 TFEL Q AS YR+YLFYP Sbjct: 335 TFELLQQKASNYRVYLFYP 353 Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 37/48 (77%), Positives = 42/48 (87%) Query: 1 MALATQCPFCQTTFRVAQDQLKLRGGLVRCGACKEVFNGNDHLVAPEI 48 MALATQCP CQTTFRVA DQLKLR GLVRCGACK++FNG +HL+ P + Sbjct: 1 MALATQCPHCQTTFRVAHDQLKLRAGLVRCGACKQIFNGIEHLLRPGV 48