BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0045.p (329 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773813.1| ribonucleoside reductase large subunit [Herb... 535 e-150 ref|YP_004754525.1| ribonucleotide reductase of class Ia (aerobi... 525 e-147 ref|YP_001354669.1| ribonucleotide-diphosphate reductase subunit... 522 e-146 ref|YP_001101008.1| ribonucleotide-diphosphate reductase subunit... 518 e-145 ref|ZP_08273119.1| Ribonucleotide reductase of class Ia (aerobic... 498 e-139 >ref|YP_003773813.1| ribonucleoside reductase large subunit [Herbaspirillum seropedicae SmR1] gb|ADJ61905.1| ribonucleoside reductase (large chain) oxidoreductase protein [Herbaspirillum seropedicae SmR1] Length = 994 Score = 535 bits (1379), Expect = e-150, Method: Compositional matrix adjust. Identities = 247/260 (95%), Positives = 255/260 (98%) Query: 1 MNTANWIPDLFMKRVMEKGEWTLFSPSDAPDLHDKFGKAFEEAYTGYEAKAARGELKLFK 60 MNTANWIPDLFMKRVMEKGEWTLFSPSD PDLHDKFG+AFEEAYT YEAKAARGELKLFK Sbjct: 484 MNTANWIPDLFMKRVMEKGEWTLFSPSDTPDLHDKFGRAFEEAYTAYEAKAARGELKLFK 543 Query: 61 KIAALDLWRKMLSMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTNESEIA 120 K+ A DLWRKMLSMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTN+SEIA Sbjct: 544 KVQANDLWRKMLSMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTNDSEIA 603 Query: 121 VCNLGSVNMPAHLVNGEIDHAKLQKTIRTAMRMLDNVIDINYYAVKKARDSNLRHRPVGL 180 VCNLGSVN+PAHLVNGE+DHAKLQKTIRTAMRMLDNVIDINYYAVKKARDSNLRHRPVG+ Sbjct: 604 VCNLGSVNLPAHLVNGELDHAKLQKTIRTAMRMLDNVIDINYYAVKKARDSNLRHRPVGM 663 Query: 181 GIMGFQDCLHMKRVPYASMDAVEFADRSMEAVCYYAYWASTELAEERGRYSSYRGSLWDR 240 GIMGFQDCLH+KRVPYASMDAVEFADRSMEAVCYYAY ASTELAEERGRY+SYRGSLWDR Sbjct: 664 GIMGFQDCLHIKRVPYASMDAVEFADRSMEAVCYYAYMASTELAEERGRYASYRGSLWDR 723 Query: 241 GILPQDSLKLLAQERGGYLE 260 GILPQDSLKLLAQERGGYLE Sbjct: 724 GILPQDSLKLLAQERGGYLE 743 >ref|YP_004754525.1| ribonucleotide reductase of class Ia (aerobic) subunit alpha [Collimonas fungivorans Ter331] gb|AEK63702.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit [Collimonas fungivorans Ter331] Length = 974 Score = 525 bits (1353), Expect = e-147, Method: Compositional matrix adjust. Identities = 243/267 (91%), Positives = 256/267 (95%) Query: 1 MNTANWIPDLFMKRVMEKGEWTLFSPSDAPDLHDKFGKAFEEAYTGYEAKAARGELKLFK 60 MNTANWIPDLFMKRVMEKGEWTLFSPSDAPDLHDK GKAFEEAYTGYEA+AARG+L+LFK Sbjct: 481 MNTANWIPDLFMKRVMEKGEWTLFSPSDAPDLHDKVGKAFEEAYTGYEARAARGDLRLFK 540 Query: 61 KIAALDLWRKMLSMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTNESEIA 120 KI ALDLWRKMLSMLFETGHPWITFKDPCNIRSPQQHVG+VHSSNLCTEITLNTNESEIA Sbjct: 541 KIQALDLWRKMLSMLFETGHPWITFKDPCNIRSPQQHVGMVHSSNLCTEITLNTNESEIA 600 Query: 121 VCNLGSVNMPAHLVNGEIDHAKLQKTIRTAMRMLDNVIDINYYAVKKARDSNLRHRPVGL 180 VCNLGSVN+PAH+ +G++DHAKLQKTI TAMRMLDNVIDINYYAVKKARDSNLRHRPVGL Sbjct: 601 VCNLGSVNLPAHMKDGQLDHAKLQKTINTAMRMLDNVIDINYYAVKKARDSNLRHRPVGL 660 Query: 181 GIMGFQDCLHMKRVPYASMDAVEFADRSMEAVCYYAYWASTELAEERGRYSSYRGSLWDR 240 GIMGFQDCLHM RVPYAS AVEFAD+SMEAVCY+AYWASTELAEERGRYSSYRGSLWDR Sbjct: 661 GIMGFQDCLHMMRVPYASQAAVEFADKSMEAVCYHAYWASTELAEERGRYSSYRGSLWDR 720 Query: 241 GILPQDSLKLLAQERGGYLEXVRNAGL 267 GILPQDSLKLLA+ERGGYLE +A L Sbjct: 721 GILPQDSLKLLAEERGGYLEADMSASL 747 >ref|YP_001354669.1| ribonucleotide-diphosphate reductase subunit alpha [Janthinobacterium sp. Marseille] gb|ABR88353.1| ribonucleoside-diphosphate reductase alpha chain [Janthinobacterium sp. Marseille] Length = 963 Score = 522 bits (1345), Expect = e-146, Method: Compositional matrix adjust. Identities = 241/260 (92%), Positives = 252/260 (96%) Query: 1 MNTANWIPDLFMKRVMEKGEWTLFSPSDAPDLHDKFGKAFEEAYTGYEAKAARGELKLFK 60 MNTANWIPDLFMKRVMEKGEWTLFSPSDAPDLHDK GKAFE AYTGYEAKAARGELKLFK Sbjct: 481 MNTANWIPDLFMKRVMEKGEWTLFSPSDAPDLHDKVGKAFEAAYTGYEAKAARGELKLFK 540 Query: 61 KIAALDLWRKMLSMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTNESEIA 120 KI ALDLWRKMLSMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTN+SEIA Sbjct: 541 KIQALDLWRKMLSMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTNDSEIA 600 Query: 121 VCNLGSVNMPAHLVNGEIDHAKLQKTIRTAMRMLDNVIDINYYAVKKARDSNLRHRPVGL 180 VCNLGSVNMPAH+ +G++DH KLQKT+RTAMRMLDNVIDINYYAVKKARDSNLRHRPVGL Sbjct: 601 VCNLGSVNMPAHMKDGQLDHVKLQKTVRTAMRMLDNVIDINYYAVKKARDSNLRHRPVGL 660 Query: 181 GIMGFQDCLHMKRVPYASMDAVEFADRSMEAVCYYAYWASTELAEERGRYSSYRGSLWDR 240 GIMGFQDCLHM R+PYAS +AV+FADRSMEAVCYYAY+ASTELAEERGRYSSYRGSLWDR Sbjct: 661 GIMGFQDCLHMMRIPYASDEAVQFADRSMEAVCYYAYYASTELAEERGRYSSYRGSLWDR 720 Query: 241 GILPQDSLKLLAQERGGYLE 260 GILPQDSLKLL +ERGGYLE Sbjct: 721 GILPQDSLKLLQEERGGYLE 740 >ref|YP_001101008.1| ribonucleotide-diphosphate reductase subunit alpha [Herminiimonas arsenicoxydans] emb|CAL62887.1| Ribonucleoside-diphosphate reductase alpha subunit (Ribonucleotide reductase) [Herminiimonas arsenicoxydans] Length = 966 Score = 518 bits (1333), Expect = e-145, Method: Compositional matrix adjust. Identities = 241/261 (92%), Positives = 250/261 (95%), Gaps = 1/261 (0%) Query: 1 MNTANWIPDLFMKRVMEKGEWTLFSPSDAPDLHDKFGKAFEEAYTGYEAKAARGELKLFK 60 MNTANWIPDLFMKRVMEKGEWTLFSPSDAPDLHDK GKAFEEAYTGYEAKAARGELKLFK Sbjct: 482 MNTANWIPDLFMKRVMEKGEWTLFSPSDAPDLHDKVGKAFEEAYTGYEAKAARGELKLFK 541 Query: 61 KIAALDLWRKMLSMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTNESEIA 120 KI ALDLWRKMLSMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTNESEIA Sbjct: 542 KIQALDLWRKMLSMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTNESEIA 601 Query: 121 VCNLGSVNMPAHLVNGEIDHAKLQKTIRTAMRMLDNVIDINYYAVKKARDSNLRHRPVGL 180 VCNLGSVNMPAH+ +G++DH KLQKTIRTAMRMLDNVIDINYYAV KARDSNLRHRPVG+ Sbjct: 602 VCNLGSVNMPAHMKDGKLDHVKLQKTIRTAMRMLDNVIDINYYAVNKARDSNLRHRPVGM 661 Query: 181 GIMGFQDCLHMKRVPYASMDAVEFADRSMEAVCYYAYWASTELAEERGRYSSYRGSLWDR 240 GIMGFQDCLHM R+PYAS DAV+FAD SMEAVCYYAY+ASTELAEERGRYSSY+GSLWDR Sbjct: 662 GIMGFQDCLHMMRIPYASNDAVQFADNSMEAVCYYAYYASTELAEERGRYSSYKGSLWDR 721 Query: 241 GILPQDSLKLLAQERGG-YLE 260 GILPQDSLKLLA ERG YLE Sbjct: 722 GILPQDSLKLLADERGAKYLE 742 >ref|ZP_08273119.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit [Oxalobacteraceae bacterium IMCC9480] gb|EGF33403.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit [Oxalobacteraceae bacterium IMCC9480] Length = 969 Score = 498 bits (1283), Expect = e-139, Method: Compositional matrix adjust. Identities = 227/260 (87%), Positives = 244/260 (93%) Query: 1 MNTANWIPDLFMKRVMEKGEWTLFSPSDAPDLHDKFGKAFEEAYTGYEAKAARGELKLFK 60 MNTANWIPDLFMKRVMEKG W LFSPS+ PDLHDK G+AFE AYTGYEA AARGEL++FK Sbjct: 481 MNTANWIPDLFMKRVMEKGSWMLFSPSEVPDLHDKVGRAFEAAYTGYEAAAARGELRMFK 540 Query: 61 KIAALDLWRKMLSMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTNESEIA 120 K+ ALDLWRKMLSMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTNESEIA Sbjct: 541 KVEALDLWRKMLSMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTNESEIA 600 Query: 121 VCNLGSVNMPAHLVNGEIDHAKLQKTIRTAMRMLDNVIDINYYAVKKARDSNLRHRPVGL 180 VCNLGSVN+PAH+ +G++DH KLQKTIR AMRMLDNVIDINYYAV+KARDSN+RHRPVGL Sbjct: 601 VCNLGSVNLPAHMKDGQLDHVKLQKTIRIAMRMLDNVIDINYYAVQKARDSNMRHRPVGL 660 Query: 181 GIMGFQDCLHMKRVPYASMDAVEFADRSMEAVCYYAYWASTELAEERGRYSSYRGSLWDR 240 GIMGFQDCLH+ RVPYAS +AV FAD+SMEAVCYYAY ASTELAEERG YSSY+GSLWDR Sbjct: 661 GIMGFQDCLHIMRVPYASAEAVSFADKSMEAVCYYAYTASTELAEERGAYSSYKGSLWDR 720 Query: 241 GILPQDSLKLLAQERGGYLE 260 GILPQDSLKLL +ERGGYLE Sbjct: 721 GILPQDSLKLLMEERGGYLE 740