BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0031.p (224 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773803.1| prolyl-tRNA synthetase [Herbaspirillum serop... 418 e-115 ref|YP_001354678.1| prolyl-tRNA synthetase [Janthinobacterium sp... 403 e-110 ref|YP_004754539.1| prolyl-tRNA synthetase [Collimonas fungivora... 393 e-107 ref|YP_001101018.1| prolyl-tRNA synthetase [Herminiimonas arseni... 392 e-107 ref|YP_001897057.1| prolyl-tRNA synthetase [Burkholderia phytofi... 373 e-102 >ref|YP_003773803.1| prolyl-tRNA synthetase [Herbaspirillum seropedicae SmR1] gb|ADJ61895.1| prolyl-tRNA synthetase [Herbaspirillum seropedicae SmR1] Length = 575 Score = 418 bits (1075), Expect = e-115, Method: Compositional matrix adjust. Identities = 198/224 (88%), Positives = 210/224 (93%) Query: 1 VADRTVANMSDFVCGANEVDFHFTGANWDRDLPEPVVADIRNVVEGDASPDGKGVLAIQR 60 VADRTVANM+DFVCGANE DFH+TGANW RDLPEP+VADIRNVVEGDASPDGKGVLAIQR Sbjct: 351 VADRTVANMADFVCGANEADFHYTGANWGRDLPEPLVADIRNVVEGDASPDGKGVLAIQR 410 Query: 61 GIEVGHVFQLGTAYSESMKATYLDEAGKPQPLQMGCYGIGVTRILGAAIEQNFDDKGIIW 120 GIEVGHVFQLGT YSE+MKATYLDEAGKPQPL MGCYGIGVTRILGAAIEQNFDD+GIIW Sbjct: 411 GIEVGHVFQLGTTYSEAMKATYLDEAGKPQPLVMGCYGIGVTRILGAAIEQNFDDRGIIW 470 Query: 121 PATLAPFEVVLCPMGYDRSEAVKAEIDKLYDALVAAGVDVILDDRGERPGAMFADWELIG 180 P ++APFEVVLCPMGYDRSEAVK EIDKLY L AGVDV+LDDRGERPGAMFADWELIG Sbjct: 471 PTSIAPFEVVLCPMGYDRSEAVKTEIDKLYAQLSEAGVDVVLDDRGERPGAMFADWELIG 530 Query: 181 VPHRVVIGDRGLKDGQIEYQGRRDTAATPVPLVDALAFIKGKLA 224 VPHR+V+GDRGLKDG IEYQGRRDT AT VPL +ALAFI+GKLA Sbjct: 531 VPHRIVVGDRGLKDGNIEYQGRRDTEATQVPLAEALAFIQGKLA 574 >ref|YP_001354678.1| prolyl-tRNA synthetase [Janthinobacterium sp. Marseille] sp|A6T2D1.1|SYP_JANMA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gb|ABR89722.1| prolyl-tRNA synthetase [Janthinobacterium sp. Marseille] Length = 577 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 193/224 (86%), Positives = 202/224 (90%) Query: 1 VADRTVANMSDFVCGANEVDFHFTGANWDRDLPEPVVADIRNVVEGDASPDGKGVLAIQR 60 V DRTVANM DFVCGANEVDFHFTG NW RDLPE V DIRNVVEGD SPDGKG LAIQR Sbjct: 353 VVDRTVANMHDFVCGANEVDFHFTGVNWGRDLPEAQVFDIRNVVEGDPSPDGKGTLAIQR 412 Query: 61 GIEVGHVFQLGTAYSESMKATYLDEAGKPQPLQMGCYGIGVTRILGAAIEQNFDDKGIIW 120 GIEVGHVFQLGTAYSESMKATYLDE GKPQ +QMGCYGIGVTRILGAAIEQNFDDKGIIW Sbjct: 413 GIEVGHVFQLGTAYSESMKATYLDENGKPQLIQMGCYGIGVTRILGAAIEQNFDDKGIIW 472 Query: 121 PATLAPFEVVLCPMGYDRSEAVKAEIDKLYDALVAAGVDVILDDRGERPGAMFADWELIG 180 P LAPFEVVLCPMGYDRSE VKAE DKLY+AL AAGVDVILDDRGERPGAMFADWELIG Sbjct: 473 PTALAPFEVVLCPMGYDRSEGVKAETDKLYEALQAAGVDVILDDRGERPGAMFADWELIG 532 Query: 181 VPHRVVIGDRGLKDGQIEYQGRRDTAATPVPLVDALAFIKGKLA 224 VPHR+VIGDRGLK+G++EYQGRRD AATPV L + L F++ KLA Sbjct: 533 VPHRIVIGDRGLKEGKLEYQGRRDAAATPVALEEMLGFVQAKLA 576 >ref|YP_004754539.1| prolyl-tRNA synthetase [Collimonas fungivorans Ter331] gb|AEK63716.1| Prolyl-tRNA synthetase [Collimonas fungivorans Ter331] Length = 580 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 186/216 (86%), Positives = 196/216 (90%) Query: 8 NMSDFVCGANEVDFHFTGANWDRDLPEPVVADIRNVVEGDASPDGKGVLAIQRGIEVGHV 67 NM DFV GANEVDFH+TG NW RDLPEP+V DIRNVVEGD SPDGKG LAI RGIEVGHV Sbjct: 362 NMHDFVSGANEVDFHYTGVNWGRDLPEPMVFDIRNVVEGDPSPDGKGALAILRGIEVGHV 421 Query: 68 FQLGTAYSESMKATYLDEAGKPQPLQMGCYGIGVTRILGAAIEQNFDDKGIIWPATLAPF 127 FQLGTAYSESMKAT+LDE GKPQ LQMGCYGIG+TRILGAAIEQNFDDKGIIWP ++APF Sbjct: 422 FQLGTAYSESMKATFLDENGKPQMLQMGCYGIGITRILGAAIEQNFDDKGIIWPTSIAPF 481 Query: 128 EVVLCPMGYDRSEAVKAEIDKLYDALVAAGVDVILDDRGERPGAMFADWELIGVPHRVVI 187 EVVLCPMGYDRSEAVKAE DKLYD L+AAGVDVILDDRGERPGAMFADWELIGVPHRVVI Sbjct: 482 EVVLCPMGYDRSEAVKAETDKLYDTLLAAGVDVILDDRGERPGAMFADWELIGVPHRVVI 541 Query: 188 GDRGLKDGQIEYQGRRDTAATPVPLVDALAFIKGKL 223 GDRGLKDGQ+EYQGRRDT AT VPL + FIK +L Sbjct: 542 GDRGLKDGQLEYQGRRDTEATTVPLAEVAGFIKARL 577 >ref|YP_001101018.1| prolyl-tRNA synthetase [Herminiimonas arsenicoxydans] sp|A4G8R0.1|SYP_HERAR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS emb|CAL62897.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS) (Global RNA synthesis factor) [Herminiimonas arsenicoxydans] Length = 577 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 186/224 (83%), Positives = 202/224 (90%) Query: 1 VADRTVANMSDFVCGANEVDFHFTGANWDRDLPEPVVADIRNVVEGDASPDGKGVLAIQR 60 V DRTVA MSDFVCGANEVDFHFTG NW RDLPE +V D+RNVVEGD SPDGKGVLAIQR Sbjct: 353 VVDRTVAAMSDFVCGANEVDFHFTGVNWGRDLPEAMVLDLRNVVEGDPSPDGKGVLAIQR 412 Query: 61 GIEVGHVFQLGTAYSESMKATYLDEAGKPQPLQMGCYGIGVTRILGAAIEQNFDDKGIIW 120 GIEVGHVFQLGTAYSE MKATYLDE GKPQ +QMGCYGIGVTRI+GAAIEQNFDD+GIIW Sbjct: 413 GIEVGHVFQLGTAYSEKMKATYLDENGKPQLIQMGCYGIGVTRIVGAAIEQNFDDRGIIW 472 Query: 121 PATLAPFEVVLCPMGYDRSEAVKAEIDKLYDALVAAGVDVILDDRGERPGAMFADWELIG 180 PA LAPFEVVLCPMGYDRSE+VK E DKLY+AL+AAGVDVILDDRGERPGAMFADWELIG Sbjct: 473 PAALAPFEVVLCPMGYDRSESVKTETDKLYEALLAAGVDVILDDRGERPGAMFADWELIG 532 Query: 181 VPHRVVIGDRGLKDGQIEYQGRRDTAATPVPLVDALAFIKGKLA 224 PHR+VIG+RGLK+G +EY+GRRD AT V L D LAF++ +LA Sbjct: 533 APHRIVIGERGLKEGALEYKGRRDADATAVALDDMLAFVQARLA 576 >ref|YP_001897057.1| prolyl-tRNA synthetase [Burkholderia phytofirmans PsJN] sp|B2SYU8.1|SYP_BURPP RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA ligase; Short=ProRS gb|ACD17833.1| prolyl-tRNA synthetase [Burkholderia phytofirmans PsJN] Length = 578 Score = 373 bits (958), Expect = e-102, Method: Compositional matrix adjust. Identities = 179/223 (80%), Positives = 198/223 (88%) Query: 1 VADRTVANMSDFVCGANEVDFHFTGANWDRDLPEPVVADIRNVVEGDASPDGKGVLAIQR 60 VADRTVANMSDFV G+NEVD+H TG NW RDLPEPVVADIRNV +GD SPDGKGVL I R Sbjct: 350 VADRTVANMSDFVVGSNEVDYHTTGVNWGRDLPEPVVADIRNVKKGDPSPDGKGVLDICR 409 Query: 61 GIEVGHVFQLGTAYSESMKATYLDEAGKPQPLQMGCYGIGVTRILGAAIEQNFDDKGIIW 120 GIEVGHVFQLGT YSE+M AT LDE GKP+P++MGCYGIGVTRILGAAIEQNFDDKGIIW Sbjct: 410 GIEVGHVFQLGTKYSEAMGATCLDETGKPRPMEMGCYGIGVTRILGAAIEQNFDDKGIIW 469 Query: 121 PATLAPFEVVLCPMGYDRSEAVKAEIDKLYDALVAAGVDVILDDRGERPGAMFADWELIG 180 P ++APFEVVLCPMGYDRSEAV+AE DKLY ALV AG+DVILDDRGERPG MFADWELIG Sbjct: 470 PESIAPFEVVLCPMGYDRSEAVRAEADKLYAALVEAGIDVILDDRGERPGVMFADWELIG 529 Query: 181 VPHRVVIGDRGLKDGQIEYQGRRDTAATPVPLVDALAFIKGKL 223 VPHR+VIGDRGLK+G++EYQGRRD AT +P+ DA + GK+ Sbjct: 530 VPHRLVIGDRGLKEGKLEYQGRRDAEATLLPVEDAAQTVIGKV 572