BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0030.p         (261 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003773803.1| prolyl-tRNA synthetase [Herbaspirillum serop...   406   e-111
ref|YP_001354678.1| prolyl-tRNA synthetase [Janthinobacterium sp...   388   e-106
ref|YP_004754539.1| prolyl-tRNA synthetase [Collimonas fungivora...   388   e-106
ref|YP_001101018.1| prolyl-tRNA synthetase [Herminiimonas arseni...   379   e-103
sp|Q1LIQ4.2|SYP_RALME RecName: Full=Prolyl-tRNA synthetase; AltN...   379   e-103

>ref|YP_003773803.1| prolyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gb|ADJ61895.1| prolyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
          Length = 575

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 190/203 (93%), Positives = 201/203 (99%)

Query: 1   MPMGLKVIRKVEAIVREEMNRSGAIELLMPVVQPAELWQETGRWDKMGAELMRVKDRHGR 60
           MPMGL+VIRKVEAIVREEMNR+GA+ELLMPVVQPAELWQETGRW+KMGAELMRVKDRHGR
Sbjct: 43  MPMGLRVIRKVEAIVREEMNRAGAVELLMPVVQPAELWQETGRWNKMGAELMRVKDRHGR 102

Query: 61  DFAIQPTSEEVVTDVARTELRSYKQLPVNFYHIQTKFRDERRPRFGLMRGREFTMKDAYS 120
           DFAIQPTSEEVVTDVAR+ELRSYKQLPVNFYHIQTKFRDERRPRFGLMRGREFTMKDAYS
Sbjct: 103 DFAIQPTSEEVVTDVARSELRSYKQLPVNFYHIQTKFRDERRPRFGLMRGREFTMKDAYS 162

Query: 121 FDRDIDGLKKSYQVMYDAYVRIFTRFGLQFRAVAADNGAIGGSGSHEFHVIAATGEDALV 180
           FDRD+DGLKKSYQ MYDAYVRIFTRFGL+FRAVAADNGAIGGSGSHEFHV+AATGEDALV
Sbjct: 163 FDRDVDGLKKSYQAMYDAYVRIFTRFGLEFRAVAADNGAIGGSGSHEFHVVAATGEDALV 222

Query: 181 YCPTSDYAANMEAAEAVAVNATR 203
           YCPTSDYAANMEAAEA+ V++TR
Sbjct: 223 YCPTSDYAANMEAAEALPVDSTR 245


>ref|YP_001354678.1| prolyl-tRNA synthetase [Janthinobacterium sp. Marseille]
 sp|A6T2D1.1|SYP_JANMA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gb|ABR89722.1| prolyl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 577

 Score =  388 bits (997), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 179/203 (88%), Positives = 195/203 (96%)

Query: 1   MPMGLKVIRKVEAIVREEMNRSGAIELLMPVVQPAELWQETGRWDKMGAELMRVKDRHGR 60
           MPMGL+VIRKVEAI+REEMN + AIELLMP+VQPAELWQETGRWDKMGAELMRVKDRHGR
Sbjct: 43  MPMGLRVIRKVEAIIREEMNNAHAIELLMPLVQPAELWQETGRWDKMGAELMRVKDRHGR 102

Query: 61  DFAIQPTSEEVVTDVARTELRSYKQLPVNFYHIQTKFRDERRPRFGLMRGREFTMKDAYS 120
           +FAIQPTSEEVVTDV RTE++SY+QLP+NFYHIQTKFRDERRPRFGLMRGREFTMKDAYS
Sbjct: 103 EFAIQPTSEEVVTDVVRTEIKSYRQLPINFYHIQTKFRDERRPRFGLMRGREFTMKDAYS 162

Query: 121 FDRDIDGLKKSYQVMYDAYVRIFTRFGLQFRAVAADNGAIGGSGSHEFHVIAATGEDALV 180
           FDRDIDGLKKSYQ+M+DAYV+IF RFGLQFRAVAADNGAIGGSGSHEFHVIA TGEDALV
Sbjct: 163 FDRDIDGLKKSYQIMFDAYVKIFNRFGLQFRAVAADNGAIGGSGSHEFHVIADTGEDALV 222

Query: 181 YCPTSDYAANMEAAEAVAVNATR 203
           YCP SDYAANMEAAEA+ +++ R
Sbjct: 223 YCPNSDYAANMEAAEALPLSSAR 245


>ref|YP_004754539.1| prolyl-tRNA synthetase [Collimonas fungivorans Ter331]
 gb|AEK63716.1| Prolyl-tRNA synthetase [Collimonas fungivorans Ter331]
          Length = 580

 Score =  388 bits (997), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 179/203 (88%), Positives = 194/203 (95%)

Query: 1   MPMGLKVIRKVEAIVREEMNRSGAIELLMPVVQPAELWQETGRWDKMGAELMRVKDRHGR 60
           MPMGL+VIRKVE+IVREEMNRSGA+ELLMPVVQPAELWQETGRW K GAELMRVKDRHGR
Sbjct: 43  MPMGLRVIRKVESIVREEMNRSGAVELLMPVVQPAELWQETGRWQKYGAELMRVKDRHGR 102

Query: 61  DFAIQPTSEEVVTDVARTELRSYKQLPVNFYHIQTKFRDERRPRFGLMRGREFTMKDAYS 120
           DF IQPTSEEV+TD+ARTELRSY++LPVNFYHIQTKFRDERRPRFGLMRGREFTMKDAYS
Sbjct: 103 DFIIQPTSEEVITDIARTELRSYRKLPVNFYHIQTKFRDERRPRFGLMRGREFTMKDAYS 162

Query: 121 FDRDIDGLKKSYQVMYDAYVRIFTRFGLQFRAVAADNGAIGGSGSHEFHVIAATGEDALV 180
           FDRD+DGLK+SYQ+MYDAYVRIF RFGLQFRAVAADNGAIGG+GSHEFHVIAATGEDA+V
Sbjct: 163 FDRDLDGLKQSYQIMYDAYVRIFNRFGLQFRAVAADNGAIGGTGSHEFHVIAATGEDAIV 222

Query: 181 YCPTSDYAANMEAAEAVAVNATR 203
           YCP SDYAANMEAAE++ +   R
Sbjct: 223 YCPNSDYAANMEAAESLPLYPAR 245


>ref|YP_001101018.1| prolyl-tRNA synthetase [Herminiimonas arsenicoxydans]
 sp|A4G8R0.1|SYP_HERAR RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 emb|CAL62897.1| Prolyl-tRNA synthetase (Proline--tRNA ligase) (ProRS) (Global RNA
           synthesis factor) [Herminiimonas arsenicoxydans]
          Length = 577

 Score =  379 bits (972), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 174/198 (87%), Positives = 192/198 (96%)

Query: 1   MPMGLKVIRKVEAIVREEMNRSGAIELLMPVVQPAELWQETGRWDKMGAELMRVKDRHGR 60
           MP+GL+VIRKVEAIVREEMNR+ AIELLMP+VQPAELWQETGRWDKMG ELMRVKDRHGR
Sbjct: 43  MPIGLRVIRKVEAIVREEMNRAHAIELLMPLVQPAELWQETGRWDKMGPELMRVKDRHGR 102

Query: 61  DFAIQPTSEEVVTDVARTELRSYKQLPVNFYHIQTKFRDERRPRFGLMRGREFTMKDAYS 120
           ++AIQPTSEEVVTDV R+E++SY+QLP+NFYHIQTKFRDERRPRFGLMRGREFTMKDAYS
Sbjct: 103 EYAIQPTSEEVVTDVVRSEIKSYRQLPLNFYHIQTKFRDERRPRFGLMRGREFTMKDAYS 162

Query: 121 FDRDIDGLKKSYQVMYDAYVRIFTRFGLQFRAVAADNGAIGGSGSHEFHVIAATGEDALV 180
           FDRD +GLK+SYQ+M+DAYV+IF RFGLQFRAVAADNGAIGGSGSHEFHVIA TGEDA+V
Sbjct: 163 FDRDAEGLKRSYQIMFDAYVKIFNRFGLQFRAVAADNGAIGGSGSHEFHVIADTGEDAIV 222

Query: 181 YCPTSDYAANMEAAEAVA 198
           YCPTSDYAANMEAAEA+A
Sbjct: 223 YCPTSDYAANMEAAEAIA 240


>sp|Q1LIQ4.2|SYP_RALME RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
          Length = 573

 Score =  379 bits (972), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 177/203 (87%), Positives = 192/203 (94%)

Query: 1   MPMGLKVIRKVEAIVREEMNRSGAIELLMPVVQPAELWQETGRWDKMGAELMRVKDRHGR 60
           MP+GL+VIRKVE IVREEMNR+GA+EL MPV+QPAELWQETGRWDKMG EL+R+KDRH R
Sbjct: 43  MPVGLRVIRKVENIVREEMNRAGAVELSMPVIQPAELWQETGRWDKMGPELLRLKDRHER 102

Query: 61  DFAIQPTSEEVVTDVARTELRSYKQLPVNFYHIQTKFRDERRPRFGLMRGREFTMKDAYS 120
           DFA+QPTSEEVVTD+ARTE+RSYKQLPVNFY IQTKFRDERRPRFG+MRGREFTMKDAYS
Sbjct: 103 DFAVQPTSEEVVTDIARTEIRSYKQLPVNFYQIQTKFRDERRPRFGIMRGREFTMKDAYS 162

Query: 121 FDRDIDGLKKSYQVMYDAYVRIFTRFGLQFRAVAADNGAIGGSGSHEFHVIAATGEDALV 180
           FDRDIDGLK SYQ MYDAYVRIF RFGL+FRAVAADNGAIGGSGSHEFHVIA TGEDA+V
Sbjct: 163 FDRDIDGLKASYQNMYDAYVRIFQRFGLEFRAVAADNGAIGGSGSHEFHVIADTGEDAIV 222

Query: 181 YCPTSDYAANMEAAEAVAVNATR 203
           YCPTSDYAANMEAAEA+ + ATR
Sbjct: 223 YCPTSDYAANMEAAEALPLLATR 245