BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0024.p         (87 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001101023.1| 50S ribosomal protein L27 [Herminiimonas ars...   157   7e-37
ref|YP_004754544.1| 50S ribosomal protein L27p [Collimonas fungi...   155   1e-36
ref|ZP_08274079.1| LSU ribosomal protein L27p [Oxalobacteraceae ...   154   4e-36
ref|YP_001354683.1| 50S ribosomal protein L27 [Janthinobacterium...   151   4e-35
ref|YP_003773798.1| 50S ribosomal protein L27 [Herbaspirillum se...   146   1e-33

>ref|YP_001101023.1| 50S ribosomal protein L27 [Herminiimonas arsenicoxydans]
 sp|A4G8R5.1|RL27_HERAR RecName: Full=50S ribosomal protein L27
 emb|CAL62902.1| 50S ribosomal subunit protein L27 [Herminiimonas arsenicoxydans]
          Length = 85

 Score =  157 bits (396), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 78/85 (91%), Positives = 80/85 (94%)

Query: 1  MAHKKGGGTTRNGRDSESKRLGVKVYGGQAINAGGIIIRQRGTKVHPGENVGMGKDHTLF 60
          MAHKKGGGTTRNGRDSESKRLGVKVYGGQ INAGGIIIRQRGTKVHPGENVGMGKDHTLF
Sbjct: 1  MAHKKGGGTTRNGRDSESKRLGVKVYGGQVINAGGIIIRQRGTKVHPGENVGMGKDHTLF 60

Query: 61 ALTEGKVQFVIKGVAKRQYVTVVAA 85
          ALT+GKV FVIKG  +RQYVTVV A
Sbjct: 61 ALTDGKVAFVIKGALQRQYVTVVPA 85


>ref|YP_004754544.1| 50S ribosomal protein L27p [Collimonas fungivorans Ter331]
 gb|AEK63721.1| LSU ribosomal protein L27p [Collimonas fungivorans Ter331]
          Length = 85

 Score =  155 bits (393), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 77/85 (90%), Positives = 79/85 (92%)

Query: 1  MAHKKGGGTTRNGRDSESKRLGVKVYGGQAINAGGIIIRQRGTKVHPGENVGMGKDHTLF 60
          MAHKKGGGTTRNGRDSESKRLGVKVYGGQAINAGGIIIRQRGTK HPGENVGMGKDHTLF
Sbjct: 1  MAHKKGGGTTRNGRDSESKRLGVKVYGGQAINAGGIIIRQRGTKTHPGENVGMGKDHTLF 60

Query: 61 ALTEGKVQFVIKGVAKRQYVTVVAA 85
          AL +GKVQFV KG  +R YVTVVAA
Sbjct: 61 ALIDGKVQFVTKGATQRNYVTVVAA 85


>ref|ZP_08274079.1| LSU ribosomal protein L27p [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF32448.1| LSU ribosomal protein L27p [Oxalobacteraceae bacterium IMCC9480]
          Length = 85

 Score =  154 bits (389), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 75/85 (88%), Positives = 79/85 (92%)

Query: 1  MAHKKGGGTTRNGRDSESKRLGVKVYGGQAINAGGIIIRQRGTKVHPGENVGMGKDHTLF 60
          MAHKKGGGTTRNGRDSESKRLGVKVYGGQAINAGGIIIRQRGTK HPGENVGMGKDHTLF
Sbjct: 1  MAHKKGGGTTRNGRDSESKRLGVKVYGGQAINAGGIIIRQRGTKTHPGENVGMGKDHTLF 60

Query: 61 ALTEGKVQFVIKGVAKRQYVTVVAA 85
          AL  GKVQF++KG  +RQ+VTVV A
Sbjct: 61 ALIPGKVQFLVKGATQRQFVTVVPA 85


>ref|YP_001354683.1| 50S ribosomal protein L27 [Janthinobacterium sp. Marseille]
 sp|A6T2D6.1|RL27_JANMA RecName: Full=50S ribosomal protein L27
 gb|ABR91654.1| 50S ribosomal protein L27 [Janthinobacterium sp. Marseille]
          Length = 85

 Score =  151 bits (381), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 74/85 (87%), Positives = 79/85 (92%)

Query: 1  MAHKKGGGTTRNGRDSESKRLGVKVYGGQAINAGGIIIRQRGTKVHPGENVGMGKDHTLF 60
          MAHKKGGGTTRNGRDSESKRLGVKVYGGQAINAGGII+RQRGTK+HPGENVG+GKDHTLF
Sbjct: 1  MAHKKGGGTTRNGRDSESKRLGVKVYGGQAINAGGIIVRQRGTKMHPGENVGIGKDHTLF 60

Query: 61 ALTEGKVQFVIKGVAKRQYVTVVAA 85
          ALT+GKV FV KG  +R YVTVV A
Sbjct: 61 ALTDGKVAFVTKGALQRHYVTVVPA 85


>ref|YP_003773798.1| 50S ribosomal protein L27 [Herbaspirillum seropedicae SmR1]
 gb|ADJ61890.1| 50S ribosomal subunit protein L27 [Herbaspirillum seropedicae
          SmR1]
          Length = 85

 Score =  146 bits (369), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 71/85 (83%), Positives = 79/85 (92%)

Query: 1  MAHKKGGGTTRNGRDSESKRLGVKVYGGQAINAGGIIIRQRGTKVHPGENVGMGKDHTLF 60
          MAHKKGGGTTRNGRDSESKRLGVKVYGGQ INAGGII+RQRGT+VH GENVG+GKDHTLF
Sbjct: 1  MAHKKGGGTTRNGRDSESKRLGVKVYGGQVINAGGIIVRQRGTRVHAGENVGVGKDHTLF 60

Query: 61 ALTEGKVQFVIKGVAKRQYVTVVAA 85
          AL +GKV+FV+KG+ +RQY TVV A
Sbjct: 61 ALKDGKVKFVVKGLQQRQYATVVPA 85