BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0023.p         (103 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003773797.1| 50S ribosomal protein L21 [Herbaspirillum se...   199   1e-49
ref|YP_001101024.1| 50S ribosomal protein L21 [Herminiimonas ars...   191   3e-47
ref|ZP_08274078.1| LSU ribosomal protein L21p [Oxalobacteraceae ...   191   3e-47
sp|A4G8R6.2|RL21_HERAR RecName: Full=50S ribosomal protein L21 >...   191   4e-47
ref|YP_004754545.1| 50S ribosomal protein L21p [Collimonas fungi...   190   6e-47

>ref|YP_003773797.1| 50S ribosomal protein L21 [Herbaspirillum seropedicae SmR1]
 gb|ADJ61889.1| 50S ribosomal subunit L21 protein [Herbaspirillum seropedicae SmR1]
          Length = 103

 Score =  199 bits (506), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 97/103 (94%), Positives = 101/103 (98%)

Query: 1   MYAVIKTGGKQYKVAAGEKLKVEQIPADIGSQITLDQVLAVGAGDTVKFGAPLVEGATVL 60
           MYAVIKTGGKQYKVAAGEKLKVEQIPADIGS+ITLDQVLAVGAG+TVKFGAPLV GATVL
Sbjct: 1   MYAVIKTGGKQYKVAAGEKLKVEQIPADIGSEITLDQVLAVGAGETVKFGAPLVAGATVL 60

Query: 61  VTVIAQGRHDKVKIFKMRRRKHYQKRQGHRQNYTELQIVSINA 103
            TV+AQGRHDKV+IFKMRRRKHYQKRQGHRQNYTELQIVSINA
Sbjct: 61  ATVVAQGRHDKVRIFKMRRRKHYQKRQGHRQNYTELQIVSINA 103


>ref|YP_001101024.1| 50S ribosomal protein L21 [Herminiimonas arsenicoxydans]
          Length = 171

 Score =  191 bits (485), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 91/103 (88%), Positives = 97/103 (94%)

Query: 1   MYAVIKTGGKQYKVAAGEKLKVEQIPADIGSQITLDQVLAVGAGDTVKFGAPLVEGATVL 60
           MYAVIKTGGKQYKV AGEK KVEQIPADIGS+ITLDQVLA+GAG+T+KFGAPLVEGATVL
Sbjct: 69  MYAVIKTGGKQYKVVAGEKFKVEQIPADIGSEITLDQVLALGAGETIKFGAPLVEGATVL 128

Query: 61  VTVIAQGRHDKVKIFKMRRRKHYQKRQGHRQNYTELQIVSINA 103
            TV++ GRHDKVKIFKMRRRKHYQK QGHRQNYTELQIVSIN 
Sbjct: 129 ATVVSHGRHDKVKIFKMRRRKHYQKHQGHRQNYTELQIVSING 171


>ref|ZP_08274078.1| LSU ribosomal protein L21p [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF32447.1| LSU ribosomal protein L21p [Oxalobacteraceae bacterium IMCC9480]
          Length = 103

 Score =  191 bits (485), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 91/103 (88%), Positives = 98/103 (95%)

Query: 1   MYAVIKTGGKQYKVAAGEKLKVEQIPADIGSQITLDQVLAVGAGDTVKFGAPLVEGATVL 60
           MYAVIKTGGKQYKV AGEK KVEQIPADIGS+IT+DQVLAVG+G+T+KFGAPLVEGATVL
Sbjct: 1   MYAVIKTGGKQYKVVAGEKFKVEQIPADIGSEITIDQVLAVGSGETIKFGAPLVEGATVL 60

Query: 61  VTVIAQGRHDKVKIFKMRRRKHYQKRQGHRQNYTELQIVSINA 103
           VTV++ GRHDKVKIFKMRRRKHYQK QGHRQNYTELQIVSIN 
Sbjct: 61  VTVLSHGRHDKVKIFKMRRRKHYQKHQGHRQNYTELQIVSING 103


>sp|A4G8R6.2|RL21_HERAR RecName: Full=50S ribosomal protein L21
 emb|CAL62903.2| 50S ribosomal subunit protein L21 [Herminiimonas arsenicoxydans]
          Length = 103

 Score =  191 bits (484), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 91/103 (88%), Positives = 97/103 (94%)

Query: 1   MYAVIKTGGKQYKVAAGEKLKVEQIPADIGSQITLDQVLAVGAGDTVKFGAPLVEGATVL 60
           MYAVIKTGGKQYKV AGEK KVEQIPADIGS+ITLDQVLA+GAG+T+KFGAPLVEGATVL
Sbjct: 1   MYAVIKTGGKQYKVVAGEKFKVEQIPADIGSEITLDQVLALGAGETIKFGAPLVEGATVL 60

Query: 61  VTVIAQGRHDKVKIFKMRRRKHYQKRQGHRQNYTELQIVSINA 103
            TV++ GRHDKVKIFKMRRRKHYQK QGHRQNYTELQIVSIN 
Sbjct: 61  ATVVSHGRHDKVKIFKMRRRKHYQKHQGHRQNYTELQIVSING 103


>ref|YP_004754545.1| 50S ribosomal protein L21p [Collimonas fungivorans Ter331]
 gb|AEK63722.1| LSU ribosomal protein L21p [Collimonas fungivorans Ter331]
          Length = 107

 Score =  190 bits (483), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 90/103 (87%), Positives = 99/103 (96%)

Query: 1   MYAVIKTGGKQYKVAAGEKLKVEQIPADIGSQITLDQVLAVGAGDTVKFGAPLVEGATVL 60
           MYAVIKTGGKQYK+ AGEKLK+EQIPADIG+++T+DQVLAVGAGDT+KFGAPLVEGATV 
Sbjct: 5   MYAVIKTGGKQYKIVAGEKLKIEQIPADIGTELTIDQVLAVGAGDTIKFGAPLVEGATVS 64

Query: 61  VTVIAQGRHDKVKIFKMRRRKHYQKRQGHRQNYTELQIVSINA 103
           V V+AQGRHDKVKIFKMRRRKHYQK QGHRQNYTE+QIVSINA
Sbjct: 65  VKVLAQGRHDKVKIFKMRRRKHYQKHQGHRQNYTEIQIVSINA 107