BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0021.p (309 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004754566.1| octaprenyl diphosphate synthase [Collimonas ... 539 e-151 ref|YP_003773796.1| octaprenyldiphosphate synthase [Herbaspirill... 529 e-148 gb|ACN58969.1| octaprenyl diphosphate synthase [uncultured bacte... 515 e-144 ref|YP_001354685.1| octaprenyl-diphosphate synthase [Janthinobac... 509 e-142 ref|YP_001101025.1| octaprenyl diphosphate synthase [Herminiimon... 481 e-134 >ref|YP_004754566.1| octaprenyl diphosphate synthase [Collimonas fungivorans Ter331] gb|AEK63743.1| octaprenyl diphosphate synthase [Collimonas fungivorans Ter331] Length = 329 Score = 539 bits (1388), Expect = e-151, Method: Compositional matrix adjust. Identities = 261/309 (84%), Positives = 287/309 (92%) Query: 1 MGEVNTVIRRQLYSEVPLVNQVSEYIISAGGKRIRPVLVLLIANAYAYKGTAHHSLAAVI 60 M VN VIRRQL+S+VPLVNQ++EYIISAGGKR+RPVLVLL+A AY Y G HH LAAVI Sbjct: 21 MEAVNAVIRRQLHSDVPLVNQIAEYIISAGGKRLRPVLVLLMAQAYGYSGEKHHELAAVI 80 Query: 61 EFIHTATLLHDDVVDESSLRRGKETANALFGNAASVLVGDFLYSRAFQMMVTVGNARVMQ 120 EFIHTATLLHDDVVDESSLRRG++TANALFGNAASVLVGDFLYSRAFQMMV V NARVMQ Sbjct: 81 EFIHTATLLHDDVVDESSLRRGRQTANALFGNAASVLVGDFLYSRAFQMMVAVDNARVMQ 140 Query: 121 IVADATNVIAEGEVLQLLNMHNPDVNEEDYLRVIRSKTAKLFEAAAQLGALISGADEAGI 180 IVADATNVIAEGEVLQLLNMHNPDV+EE+YL+VIRSKTAKLFEAAAQLGALI+GA + I Sbjct: 141 IVADATNVIAEGEVLQLLNMHNPDVSEENYLQVIRSKTAKLFEAAAQLGALIAGAGDDAI 200 Query: 181 EAAGEYGRSLGTAFQLIDDVLDYSGNAAEIGKNVGDDLREGKPTLPLIYLMENGSPEQRE 240 +AAGEYGRSLGTAFQLIDDVLDYSGNA +IGKNVGDDLREGKPTLPLIYLME+GS EQR Sbjct: 201 DAAGEYGRSLGTAFQLIDDVLDYSGNAGDIGKNVGDDLREGKPTLPLIYLMEHGSAEQRA 260 Query: 241 LVRSCIENGDEQHFDQILAAITSSGALDYTRREAQKAAQRAADAVQSLPDSKYKNSLLEL 300 LVRSCIENGDEQHFD+ILAAITSSGAL+YTR EA+KA+QRAA A+ LP+S++K+SLL+L Sbjct: 261 LVRSCIENGDEQHFDEILAAITSSGALNYTRHEAEKASQRAAAAISGLPNSQFKDSLLQL 320 Query: 301 STFAVDRNH 309 S FAVDRNH Sbjct: 321 SAFAVDRNH 329 >ref|YP_003773796.1| octaprenyldiphosphate synthase [Herbaspirillum seropedicae SmR1] gb|ADJ61888.1| octaprenyldiphosphate synthase protein [Herbaspirillum seropedicae SmR1] Length = 309 Score = 529 bits (1363), Expect = e-148, Method: Compositional matrix adjust. Identities = 262/309 (84%), Positives = 291/309 (94%) Query: 1 MGEVNTVIRRQLYSEVPLVNQVSEYIISAGGKRIRPVLVLLIANAYAYKGTAHHSLAAVI 60 M VN VIRRQLYSEVPLVNQV+EYIISAGGKR+RPVLV+LIANA+ YKG HHSLAAVI Sbjct: 1 MEAVNAVIRRQLYSEVPLVNQVAEYIISAGGKRLRPVLVVLIANAFGYKGEHHHSLAAVI 60 Query: 61 EFIHTATLLHDDVVDESSLRRGKETANALFGNAASVLVGDFLYSRAFQMMVTVGNARVMQ 120 EFIHTATLLHDDVVDESSLRRGK+TANA+FGNAASVLVGDFLYSRAFQMMV VGN RVM+ Sbjct: 61 EFIHTATLLHDDVVDESSLRRGKQTANAMFGNAASVLVGDFLYSRAFQMMVAVGNPRVME 120 Query: 121 IVADATNVIAEGEVLQLLNMHNPDVNEEDYLRVIRSKTAKLFEAAAQLGALISGADEAGI 180 IVADATNVIAEGEVLQLLNMHNPDV+E YL+VIRSKTAKLFEAA+Q+GALI+GADEAGI Sbjct: 121 IVADATNVIAEGEVLQLLNMHNPDVDENGYLQVIRSKTAKLFEAASQIGALIAGADEAGI 180 Query: 181 EAAGEYGRSLGTAFQLIDDVLDYSGNAAEIGKNVGDDLREGKPTLPLIYLMENGSPEQRE 240 EAA EYGRS+GTAFQLIDDVLDYSGN+AEIGKNVGDDLREGKPTLPLI+LM++G+P+QRE Sbjct: 181 EAAAEYGRSIGTAFQLIDDVLDYSGNSAEIGKNVGDDLREGKPTLPLIWLMQHGTPQQRE 240 Query: 241 LVRSCIENGDEQHFDQILAAITSSGALDYTRREAQKAAQRAADAVQSLPDSKYKNSLLEL 300 LVR+CIENGDEQHFD++L+AIT SGAL YTR +A+ AA+RAADA+ SLPDS++K SLLEL Sbjct: 241 LVRTCIENGDEQHFDEVLSAITHSGALAYTREQAEIAARRAADAIISLPDSQFKKSLLEL 300 Query: 301 STFAVDRNH 309 S FAVDRNH Sbjct: 301 SAFAVDRNH 309 >gb|ACN58969.1| octaprenyl diphosphate synthase [uncultured bacterium BLR10] Length = 348 Score = 515 bits (1327), Expect = e-144, Method: Compositional matrix adjust. Identities = 256/309 (82%), Positives = 288/309 (93%) Query: 1 MGEVNTVIRRQLYSEVPLVNQVSEYIISAGGKRIRPVLVLLIANAYAYKGTAHHSLAAVI 60 M VNTVIRR+L+SEV LVNQ++EYIISAGGKRIRPVLVLL+ANAY+YKGTAHH LAAV+ Sbjct: 40 MDAVNTVIRRKLHSEVSLVNQIAEYIISAGGKRIRPVLVLLVANAYSYKGTAHHELAAVV 99 Query: 61 EFIHTATLLHDDVVDESSLRRGKETANALFGNAASVLVGDFLYSRAFQMMVTVGNARVMQ 120 EFIHTATLLHDDVVDESSLRRG+ TANALFGNAASVLVGDFLYSRAFQMMV + N RVMQ Sbjct: 100 EFIHTATLLHDDVVDESSLRRGRATANALFGNAASVLVGDFLYSRAFQMMVGLNNMRVMQ 159 Query: 121 IVADATNVIAEGEVLQLLNMHNPDVNEEDYLRVIRSKTAKLFEAAAQLGALISGADEAGI 180 I++DATNVIAEGEVLQLLNMH+PDV++E YL+VIRSKTAKLFEAAA+LGAL+SGA++A I Sbjct: 160 ILSDATNVIAEGEVLQLLNMHDPDVSQERYLQVIRSKTAKLFEAAAELGALVSGANDAQI 219 Query: 181 EAAGEYGRSLGTAFQLIDDVLDYSGNAAEIGKNVGDDLREGKPTLPLIYLMENGSPEQRE 240 EAAGEYGRSLGTAFQLIDDVLDY+G+A EIGKNVGDDLREGKPTLPLIYLMENG+PEQRE Sbjct: 220 EAAGEYGRSLGTAFQLIDDVLDYAGDANEIGKNVGDDLREGKPTLPLIYLMENGTPEQRE 279 Query: 241 LVRSCIENGDEQHFDQILAAITSSGALDYTRREAQKAAQRAADAVQSLPDSKYKNSLLEL 300 LVRSCIE GDEQHFD ILAAITSSGAL+YTR++A AA+RAA+A+ LPDS YK SLL+L Sbjct: 280 LVRSCIEQGDEQHFDTILAAITSSGALEYTRQQAVTAAKRAAEAIAGLPDSIYKESLLQL 339 Query: 301 STFAVDRNH 309 + F+V+R H Sbjct: 340 ADFSVNRTH 348 >ref|YP_001354685.1| octaprenyl-diphosphate synthase [Janthinobacterium sp. Marseille] gb|ABR88769.1| octaprenyl-diphosphate synthase [Janthinobacterium sp. Marseille] Length = 334 Score = 509 bits (1310), Expect = e-142, Method: Compositional matrix adjust. Identities = 242/309 (78%), Positives = 283/309 (91%) Query: 1 MGEVNTVIRRQLYSEVPLVNQVSEYIISAGGKRIRPVLVLLIANAYAYKGTAHHSLAAVI 60 + V+TVIR++L+SEV LVNQ+++YIISAGGKRIRPVLVLL+ANAY Y+GT HH LAAV+ Sbjct: 26 LNAVDTVIRQKLHSEVALVNQIADYIISAGGKRIRPVLVLLMANAYGYRGTDHHQLAAVV 85 Query: 61 EFIHTATLLHDDVVDESSLRRGKETANALFGNAASVLVGDFLYSRAFQMMVTVGNARVMQ 120 EFIHTATLLHDDVVDESSLRRG++TANALFGNAASVLVGDFLYSRAFQMMV+VG+ R+MQ Sbjct: 86 EFIHTATLLHDDVVDESSLRRGRKTANALFGNAASVLVGDFLYSRAFQMMVSVGDIRIMQ 145 Query: 121 IVADATNVIAEGEVLQLLNMHNPDVNEEDYLRVIRSKTAKLFEAAAQLGALISGADEAGI 180 I+ADATNVIAEGEVLQLLNMH+PDV+EE Y +VIRSKTAKLFEAAAQLG LI+GA + I Sbjct: 146 ILADATNVIAEGEVLQLLNMHDPDVSEERYTQVIRSKTAKLFEAAAQLGTLIAGASDDEI 205 Query: 181 EAAGEYGRSLGTAFQLIDDVLDYSGNAAEIGKNVGDDLREGKPTLPLIYLMENGSPEQRE 240 EAA EYGRSLGTAFQLIDDVLDYSG A +IGKNVGDDLREGK TLPLIYLME+G+PEQRE Sbjct: 206 EAAAEYGRSLGTAFQLIDDVLDYSGQADDIGKNVGDDLREGKATLPLIYLMEHGTPEQRE 265 Query: 241 LVRSCIENGDEQHFDQILAAITSSGALDYTRREAQKAAQRAADAVQSLPDSKYKNSLLEL 300 LVRSCIENGDEQHFD +L A+T+SGALDYT+R+A++A+ RA ++ LPD+ +K++LL+L Sbjct: 266 LVRSCIENGDEQHFDAVLQAVTTSGALDYTKRKAEEASARATASIAGLPDNAFKDALLKL 325 Query: 301 STFAVDRNH 309 S FAV+RNH Sbjct: 326 SAFAVNRNH 334 >ref|YP_001101025.1| octaprenyl diphosphate synthase [Herminiimonas arsenicoxydans] emb|CAL62904.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase) (OPP synthetase) [Herminiimonas arsenicoxydans] Length = 329 Score = 481 bits (1237), Expect = e-134, Method: Compositional matrix adjust. Identities = 240/309 (77%), Positives = 280/309 (90%) Query: 1 MGEVNTVIRRQLYSEVPLVNQVSEYIISAGGKRIRPVLVLLIANAYAYKGTAHHSLAAVI 60 M V+ VIR++L+SEV LVNQ+++YIISAGGKRIRPVLVLL+ANA Y+GT + LAAV+ Sbjct: 21 MSAVDAVIRQKLHSEVALVNQIADYIISAGGKRIRPVLVLLMANALGYRGTHQYDLAAVV 80 Query: 61 EFIHTATLLHDDVVDESSLRRGKETANALFGNAASVLVGDFLYSRAFQMMVTVGNARVMQ 120 EFIHTATLLHDDVVDES LRRG++TANALFGNAASVLVGDFL+SRAFQMMVTVGN R MQ Sbjct: 81 EFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDFLHSRAFQMMVTVGNIRAMQ 140 Query: 121 IVADATNVIAEGEVLQLLNMHNPDVNEEDYLRVIRSKTAKLFEAAAQLGALISGADEAGI 180 I+ADATNVIAEGEVLQLLNMH+PD++EE Y +VIRSKTAKLFEAAAQLGALI+GA E I Sbjct: 141 ILADATNVIAEGEVLQLLNMHDPDISEERYTQVIRSKTAKLFEAAAQLGALIAGASEDEI 200 Query: 181 EAAGEYGRSLGTAFQLIDDVLDYSGNAAEIGKNVGDDLREGKPTLPLIYLMENGSPEQRE 240 EAA EYGRSLGTAFQLIDDVLDYSG+A +IGKNVGDDLREGK TLPLIYLME+G+ EQRE Sbjct: 201 EAAAEYGRSLGTAFQLIDDVLDYSGHAEDIGKNVGDDLREGKATLPLIYLMEHGNTEQRE 260 Query: 241 LVRSCIENGDEQHFDQILAAITSSGALDYTRREAQKAAQRAADAVQSLPDSKYKNSLLEL 300 LVRSCIENGDE+HFD +L A+T+SGALDYT+R+A++AA RAA ++ LP+S++K++LL L Sbjct: 261 LVRSCIENGDEEHFDAVLLAVTTSGALDYTKRKAEEAAARAAASIAGLPESQFKDALLNL 320 Query: 301 STFAVDRNH 309 S+FAV RNH Sbjct: 321 SSFAVHRNH 329