BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0011.p (221 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003778164.1| amino acid ABC transporter ATPase [Herbaspir... 357 6e-97 ref|YP_004755054.1| putative ABC transporter [Collimonas fungivo... 342 3e-92 ref|ZP_01914819.1| ABC transporter related protein [Limnobacter ... 326 1e-87 ref|YP_297572.1| ABC transporter related [Ralstonia eutropha JMP... 324 5e-87 ref|YP_728086.1| ABC transporter ATPase [Ralstonia eutropha H16]... 321 4e-86 >ref|YP_003778164.1| amino acid ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ66256.1| ABC-type amino acid transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 242 Score = 357 bits (917), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 178/239 (74%), Positives = 191/239 (79%), Gaps = 34/239 (14%) Query: 17 SATGGTPALEISDLQSWYGESHILHNVNLSVNKGEVVTLLGRNGAGRTTTLRSIMGLVGA 76 S++ L+ISDLQSWYGESHILHNVNL+V++GEVVTLLGRNGAGRTTTLRSIMGLVG Sbjct: 4 SSSSAPLVLQISDLQSWYGESHILHNVNLNVHQGEVVTLLGRNGAGRTTTLRSIMGLVGT 63 Query: 77 RKGSIRINGNETVAMPTYKIAHQGVGYCPEERGIFSSLSAEENLMLPPFVSKTDKGMSID 136 RKGSI+ING ET+ + T+KIAH GVGYCPEERGIFSSLSAEENLMLPPFVSKTDKGMSID Sbjct: 64 RKGSIKINGQETINLATHKIAHHGVGYCPEERGIFSSLSAEENLMLPPFVSKTDKGMSID 123 Query: 137 EIYDMFPNLKERRNSQGTRLSG----------------------------------ALAR 162 EIY+MFPNLKERRNSQGTRLSG ALAR Sbjct: 124 EIYEMFPNLKERRNSQGTRLSGGEQQMLAVARILRTGARLLLLDEISEGLAPVIVQALAR 183 Query: 163 MILMLKAKGYTIVMVEQNFRFAAPLADRFYVMEHGQIVESFASSELESKTQKLNELLGV 221 MI LKAKGYTIVMVEQNFRFAAPLADRFYVMEHGQIVESFASS+LE+K Q LNELLGV Sbjct: 184 MITTLKAKGYTIVMVEQNFRFAAPLADRFYVMEHGQIVESFASSQLEAKMQTLNELLGV 242 >ref|YP_004755054.1| putative ABC transporter [Collimonas fungivorans Ter331] gb|AEK64231.1| putative ABC transporter [Collimonas fungivorans Ter331] Length = 253 Score = 342 bits (876), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 170/243 (69%), Positives = 184/243 (75%), Gaps = 34/243 (13%) Query: 13 GGIASATGGTPALEISDLQSWYGESHILHNVNLSVNKGEVVTLLGRNGAGRTTTLRSIMG 72 G +A T GT AL I +LQ+WYGESHILHNVNLSVNKGEVVTLLGRNGAGRTTT+R+IMG Sbjct: 11 GAVAQGTAGTVALSIENLQAWYGESHILHNVNLSVNKGEVVTLLGRNGAGRTTTMRAIMG 70 Query: 73 LVGARKGSIRINGNETVAMPTYKIAHQGVGYCPEERGIFSSLSAEENLMLPPFVSKTDKG 132 L G RKGSI+I G ET+ +PTYKIAH GVGYCPEERGIFSSLS EENL+LPP +S T+KG Sbjct: 71 LTGVRKGSIKIGGVETIGLPTYKIAHHGVGYCPEERGIFSSLSTEENLLLPPSLSTTEKG 130 Query: 133 MSIDEIYDMFPNLKERRNSQGTRLSGA--------------------------------- 159 MS++EIYDMFPNLKERRNSQGTRLSG Sbjct: 131 MSVEEIYDMFPNLKERRNSQGTRLSGGEQQMLAVARILRTGARLLLLDEISEGLAPVIVQ 190 Query: 160 -LARMILMLKAKGYTIVMVEQNFRFAAPLADRFYVMEHGQIVESFASSELESKTQKLNEL 218 LARMI LKAKGYTIVMVEQNF FAAPLADRFYVMEHGQIVESFASS+LE K LN L Sbjct: 191 TLARMITTLKAKGYTIVMVEQNFCFAAPLADRFYVMEHGQIVESFASSQLEQKMPVLNAL 250 Query: 219 LGV 221 LGV Sbjct: 251 LGV 253 >ref|ZP_01914819.1| ABC transporter related protein [Limnobacter sp. MED105] gb|EDM84135.1| ABC transporter related protein [Limnobacter sp. MED105] Length = 235 Score = 326 bits (836), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 161/232 (69%), Positives = 179/232 (77%), Gaps = 34/232 (14%) Query: 24 ALEISDLQSWYGESHILHNVNLSVNKGEVVTLLGRNGAGRTTTLRSIMGLVGARKGSIRI 83 ALEI+ L +WYGESHILHN+NL+V GEVVTLLGRNGAGRT+TLR+IMGL GARKGSI+I Sbjct: 4 ALEITGLNAWYGESHILHNLNLTVKTGEVVTLLGRNGAGRTSTLRAIMGLTGARKGSIKI 63 Query: 84 NGNETVAMPTYKIAHQGVGYCPEERGIFSSLSAEENLMLPPFVSKTDKGMSIDEIYDMFP 143 NG E + MPT+KIAH GVGYCPEERGIFSSLSAEENLMLPPFVSKTDKGMS+ EIY+MFP Sbjct: 64 NGTEAIGMPTHKIAHLGVGYCPEERGIFSSLSAEENLMLPPFVSKTDKGMSVAEIYEMFP 123 Query: 144 NLKERRNSQGTRLSG----------------------------------ALARMILMLKA 169 NL ER+ SQGTRLSG ALA+MI LK+ Sbjct: 124 NLAERKKSQGTRLSGGEQQMLAVARILRTGAKLLLLDEISEGLAPVIVQALAKMITTLKS 183 Query: 170 KGYTIVMVEQNFRFAAPLADRFYVMEHGQIVESFASSELESKTQKLNELLGV 221 KGYTIVMVEQNFRFAAPLADRFYV+EHGQIVE+FASSEL+ K L+ LLGV Sbjct: 184 KGYTIVMVEQNFRFAAPLADRFYVVEHGQIVEAFASSELDEKMPVLHSLLGV 235 >ref|YP_297572.1| ABC transporter related [Ralstonia eutropha JMP134] gb|AAZ62728.1| amino acid/amide ABC transporter ATP-binding protein 2, HAAT family [Ralstonia eutropha JMP134] Length = 241 Score = 324 bits (831), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 162/239 (67%), Positives = 179/239 (74%), Gaps = 36/239 (15%) Query: 19 TGGTPALEISDLQSWYGESHILHNVNLSVNKGEVVTLLGRNGAGRTTTLRSIMGLVGARK 78 T PALEI DL +WYGESHILH V+L+VN+GEVVTLLGRNGAGRTTTLR+IMGL GARK Sbjct: 3 TSNVPALEIKDLHAWYGESHILHGVDLTVNRGEVVTLLGRNGAGRTTTLRAIMGLTGARK 62 Query: 79 GSIRINGNETVAMPTYKIAHQGVGYCPEERGIFSSLSAEENLMLPPFVSKTD--KGMSID 136 GSI++NG+ET+ +PT+KIAH G+GYCPEER IFSSLS EENLMLPP + D KGMS Sbjct: 63 GSIKVNGHETIGLPTHKIAHYGIGYCPEERAIFSSLSCEENLMLPPVLKGADSSKGMSEA 122 Query: 137 EIYDMFPNLKERRNSQGTRLSG----------------------------------ALAR 162 EIYDMFPNLKERR SQGTRLSG ALAR Sbjct: 123 EIYDMFPNLKERRQSQGTRLSGGEQQMLAVGRILRTGANLLLLDEISEGLAPVIVQALAR 182 Query: 163 MILMLKAKGYTIVMVEQNFRFAAPLADRFYVMEHGQIVESFASSELESKTQKLNELLGV 221 MILMLK KGYT+VMVEQNFRFAAPLADRFYVMEHG IVE FA+SEL++K LNELLGV Sbjct: 183 MILMLKKKGYTVVMVEQNFRFAAPLADRFYVMEHGGIVERFAASELQAKMPVLNELLGV 241 >ref|YP_728086.1| ABC transporter ATPase [Ralstonia eutropha H16] emb|CAJ94718.1| ABC-type transporter, ATPase component: HAAT family [Ralstonia eutropha H16] Length = 241 Score = 321 bits (823), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 159/236 (67%), Positives = 181/236 (76%), Gaps = 36/236 (15%) Query: 22 TPALEISDLQSWYGESHILHNVNLSVNKGEVVTLLGRNGAGRTTTLRSIMGLVGARKGSI 81 TPALEI DL +WYGESHILH V+L+VN+GEVVTLLGRNGAGRTTTLR+IMGL GARKGSI Sbjct: 6 TPALEIKDLHAWYGESHILHGVDLTVNRGEVVTLLGRNGAGRTTTLRAIMGLTGARKGSI 65 Query: 82 RINGNETVAMPTYKIAHQGVGYCPEERGIFSSLSAEENLMLPPFV--SKTDKGMSIDEIY 139 ++NG+ET+++PT+KIAH G+GYCPEER IFSSLS EENLMLPP + + T KGMS +IY Sbjct: 66 KVNGHETISLPTHKIAHYGIGYCPEERAIFSSLSCEENLMLPPVLKGADTSKGMSETDIY 125 Query: 140 DMFPNLKERRNSQGTRLSG----------------------------------ALARMIL 165 +MFPNLKERR SQGTRLSG ALARMIL Sbjct: 126 EMFPNLKERRQSQGTRLSGGEQQMLAVGRILRTGANLLLLDEISEGLAPVIVQALARMIL 185 Query: 166 MLKAKGYTIVMVEQNFRFAAPLADRFYVMEHGQIVESFASSELESKTQKLNELLGV 221 MLK KGYT+VMVEQNFRFAAPLADRFYVMEHG IVE FA++ELE+K L+ELLGV Sbjct: 186 MLKQKGYTVVMVEQNFRFAAPLADRFYVMEHGSIVERFAANELEAKMPVLHELLGV 241