BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0107.p (262 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776006.1| aminodeoxychorismate lyase [Herbaspirillum s... 458 e-127 ref|YP_004752473.1| hypothetical protein CFU_1818 [Collimonas fu... 422 e-116 ref|YP_001353677.1| hypothetical protein mma_1987 [Janthinobacte... 400 e-110 ref|ZP_08275260.1| YceG like protein [Oxalobacteraceae bacterium... 398 e-109 ref|YP_001099694.1| putative signal peptide [Herminiimonas arsen... 394 e-108 >ref|YP_003776006.1| aminodeoxychorismate lyase [Herbaspirillum seropedicae SmR1] gb|ADJ64098.1| aminodeoxychorismate lyase protein [Herbaspirillum seropedicae SmR1] Length = 326 Score = 458 bits (1179), Expect = e-127, Method: Compositional matrix adjust. Identities = 217/262 (82%), Positives = 242/262 (92%), Gaps = 1/262 (0%) Query: 1 LXARGSGKGNRIKAGSYELKPGATPLRLLEQLVRGEFAQESLTIIEGWNFRQMRQAIADH 60 L AR SG+G RIKAGSYE+KPG TP RLL+QLVRGEFAQE+LT+IEGW F+QMR+AIA+ Sbjct: 66 LYARLSGEGARIKAGSYEIKPGYTPQRLLQQLVRGEFAQEALTVIEGWTFKQMRKAIAEQ 125 Query: 61 KGLKHDTAALSNAELLAKLTTEFVVPEGLFFPDTYLFAKGASDMQIYRQAFILMSKRLNE 120 LKHDTA ++ ++LAKLT E+ PEGLFFPDTYLFAKGASDMQ+Y+QAF LMSK+LNE Sbjct: 126 PALKHDTATWTDQQILAKLTNEYTYPEGLFFPDTYLFAKGASDMQVYKQAFALMSKKLNE 185 Query: 121 AWSKRDLSLPYKTPYDALIMASIVEKETGQKSERGMVAGVFVNRLKTGMLLQTDPTVIYG 180 AW++RDLSLPY+TPY+ALIMASIVEKETGQKSERGMVAGVFVNRL+TGMLLQTDPTVIYG Sbjct: 186 AWTRRDLSLPYRTPYEALIMASIVEKETGQKSERGMVAGVFVNRLRTGMLLQTDPTVIYG 245 Query: 181 MGERYQGVIRKSDLLTDTPYNTYTRKGMPPTPIALPGAASLAGAAMNPDKTEALYFVARG 240 MGERYQG IRK DLLTDTPYNTYTR G+PPTPIALPGAASLA AA+NPDKTEALYFVARG Sbjct: 246 MGERYQGKIRKVDLLTDTPYNTYTRAGLPPTPIALPGAASLA-AALNPDKTEALYFVARG 304 Query: 241 DGTSHFSSNLSEHNQAVNKYQR 262 DGTSHFSSNL+EHNQAVN+YQR Sbjct: 305 DGTSHFSSNLNEHNQAVNRYQR 326 >ref|YP_004752473.1| hypothetical protein CFU_1818 [Collimonas fungivorans Ter331] gb|AEK61650.1| hypothetical protein CFU_1818 [Collimonas fungivorans Ter331] Length = 344 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 197/262 (75%), Positives = 232/262 (88%), Gaps = 1/262 (0%) Query: 1 LXARGSGKGNRIKAGSYELKPGATPLRLLEQLVRGEFAQESLTIIEGWNFRQMRQAIADH 60 L AR + KG+++KAGSYELKPGATPLRLL QLVRGEFAQESLT+IEGW FRQMRQA+A Sbjct: 84 LLARVTDKGSKLKAGSYELKPGATPLRLLTQLVRGEFAQESLTVIEGWTFRQMRQAVAAQ 143 Query: 61 KGLKHDTAALSNAELLAKLTTEFVVPEGLFFPDTYLFAKGASDMQIYRQAFILMSKRLNE 120 LKHDTAALS+AELLAK+T ++ +PEGLFFPDTYLFAKG+SD+Q+Y+QA L+ KRL + Sbjct: 144 PALKHDTAALSDAELLAKITPDYAMPEGLFFPDTYLFAKGSSDLQVYKQAHSLLIKRLTQ 203 Query: 121 AWSKRDLSLPYKTPYDALIMASIVEKETGQKSERGMVAGVFVNRLKTGMLLQTDPTVIYG 180 W RD SLPYKTPY+ALIMASIVEKETG++++R +AGVF+NRLK GMLLQTDPTVIYG Sbjct: 204 GWEGRDTSLPYKTPYEALIMASIVEKETGKRADRSTIAGVFINRLKIGMLLQTDPTVIYG 263 Query: 181 MGERYQGVIRKSDLLTDTPYNTYTRKGMPPTPIALPGAASLAGAAMNPDKTEALYFVARG 240 MG++YQG IRK DL TDTPYNTYTR G+PPTPIALPGA S++ AAM+P +T+ALYFVARG Sbjct: 264 MGDQYQGAIRKRDLTTDTPYNTYTRAGLPPTPIALPGAESIS-AAMHPAQTDALYFVARG 322 Query: 241 DGTSHFSSNLSEHNQAVNKYQR 262 DG+SHFS+NL EHNQAVN+YQR Sbjct: 323 DGSSHFSNNLGEHNQAVNQYQR 344 >ref|YP_001353677.1| hypothetical protein mma_1987 [Janthinobacterium sp. Marseille] gb|ABR89583.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 329 Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust. Identities = 190/260 (73%), Positives = 225/260 (86%), Gaps = 1/260 (0%) Query: 3 ARGSGKGNRIKAGSYELKPGATPLRLLEQLVRGEFAQESLTIIEGWNFRQMRQAIADHKG 62 A+ +G ++KAG+YELKPG TP L++QLVRGEF QE+LTIIEGWNFRQMRQAI H G Sbjct: 69 AQITGNSTKLKAGTYELKPGTTPNGLIKQLVRGEFVQEALTIIEGWNFRQMRQAIDGHPG 128 Query: 63 LKHDTAALSNAELLAKLTTEFVVPEGLFFPDTYLFAKGASDMQIYRQAFILMSKRLNEAW 122 L+HDTA LS+ +L+AK++T+F +PEGLF+PDTYLFAK +SD+QIY+QA LM KRLNEAW Sbjct: 129 LRHDTAGLSDKDLMAKVSTDFPLPEGLFYPDTYLFAKNSSDLQIYKQAHSLMIKRLNEAW 188 Query: 123 SKRDLSLPYKTPYDALIMASIVEKETGQKSERGMVAGVFVNRLKTGMLLQTDPTVIYGMG 182 R+ +LPY TPY+ALIMASIVEKETG+KSERGM+AGVFVNRL+ GMLLQTDPTVIYGMG Sbjct: 189 LARNDNLPYATPYEALIMASIVEKETGKKSERGMIAGVFVNRLRQGMLLQTDPTVIYGMG 248 Query: 183 ERYQGVIRKSDLLTDTPYNTYTRKGMPPTPIALPGAASLAGAAMNPDKTEALYFVARGDG 242 E+++G IRK DL TDTP+NTYTR G+PPTPIALPGA SL AAMNP KT+A+YFVARGDG Sbjct: 249 EQFKGNIRKRDLQTDTPHNTYTRLGLPPTPIALPGAESLH-AAMNPAKTDAVYFVARGDG 307 Query: 243 TSHFSSNLSEHNQAVNKYQR 262 +S FS+ L EHN AVNKYQR Sbjct: 308 SSQFSATLDEHNNAVNKYQR 327 >ref|ZP_08275260.1| YceG like protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF31266.1| YceG like protein [Oxalobacteraceae bacterium IMCC9480] Length = 329 Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust. Identities = 187/259 (72%), Positives = 222/259 (85%), Gaps = 1/259 (0%) Query: 4 RGSGKGNRIKAGSYELKPGATPLRLLEQLVRGEFAQESLTIIEGWNFRQMRQAIADHKGL 63 R +GK +IKAG Y LKPG TP RL+ QLVRGEFAQE+L IIEGW FRQMR+A+A L Sbjct: 72 RLTGKDGQIKAGHYALKPGTTPQRLVGQLVRGEFAQEALVIIEGWTFRQMREAVAASPAL 131 Query: 64 KHDTAALSNAELLAKLTTEFVVPEGLFFPDTYLFAKGASDMQIYRQAFILMSKRLNEAWS 123 KHDT ALS+ ELLAK++T++ VPEGLFFPDTYLFAKGASD+Q+YRQA M KRL +AW Sbjct: 132 KHDTVALSDKELLAKVSTDYAVPEGLFFPDTYLFAKGASDLQVYRQAHAAMLKRLQQAWE 191 Query: 124 KRDLSLPYKTPYDALIMASIVEKETGQKSERGMVAGVFVNRLKTGMLLQTDPTVIYGMGE 183 +RDLSLPYK PY+AL MASI+EKETGQK+ERGM+AGVFVNRLK GMLLQTDPTVIYGMG+ Sbjct: 192 QRDLSLPYKNPYEALTMASIIEKETGQKTERGMIAGVFVNRLKIGMLLQTDPTVIYGMGD 251 Query: 184 RYQGVIRKSDLLTDTPYNTYTRKGMPPTPIALPGAASLAGAAMNPDKTEALYFVARGDGT 243 ++QG IRK DLLTDTP+NTY R G+PP+PI+LPG +L AA+ P++T+ALYFVARGDG+ Sbjct: 252 KFQGNIRKRDLLTDTPFNTYLRVGLPPSPISLPGNDAL-NAALRPERTDALYFVARGDGS 310 Query: 244 SHFSSNLSEHNQAVNKYQR 262 S FSSNL +HN+AVN+YQR Sbjct: 311 SVFSSNLPDHNRAVNRYQR 329 >ref|YP_001099694.1| putative signal peptide [Herminiimonas arsenicoxydans] emb|CAL61567.1| putative Aminodeoxychorismate lyase [Herminiimonas arsenicoxydans] Length = 328 Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust. Identities = 185/262 (70%), Positives = 222/262 (84%), Gaps = 1/262 (0%) Query: 1 LXARGSGKGNRIKAGSYELKPGATPLRLLEQLVRGEFAQESLTIIEGWNFRQMRQAIADH 60 + A+ +G ++KAGSYELKPG TP RLL QLVRGEFAQE+LT+IEGW FRQMR+ I + Sbjct: 67 VLAQVTGNSTKLKAGSYELKPGTTPSRLLTQLVRGEFAQEALTVIEGWTFRQMREVINAN 126 Query: 61 KGLKHDTAALSNAELLAKLTTEFVVPEGLFFPDTYLFAKGASDMQIYRQAFILMSKRLNE 120 L+HDTA LS+ +L+A++++++ PEGLF+PDTYLFAK +SD+QIY+QA LM KRLNE Sbjct: 127 PALRHDTAGLSDQDLMARISSDYKTPEGLFYPDTYLFAKNSSDLQIYKQAHNLMLKRLNE 186 Query: 121 AWSKRDLSLPYKTPYDALIMASIVEKETGQKSERGMVAGVFVNRLKTGMLLQTDPTVIYG 180 AW R+ SLPY +PY+ALIMASIVEKETG+KSER M+AGVFVNRLK GMLLQTDPTVIYG Sbjct: 187 AWLARNPSLPYASPYEALIMASIVEKETGKKSERTMIAGVFVNRLKKGMLLQTDPTVIYG 246 Query: 181 MGERYQGVIRKSDLLTDTPYNTYTRKGMPPTPIALPGAASLAGAAMNPDKTEALYFVARG 240 MG+ Y+G IRKSDLLTDTP+NTYTR G+PPTPIALPG SL AAMNP T+A+YFVARG Sbjct: 247 MGDSYKGNIRKSDLLTDTPHNTYTRSGLPPTPIALPGMESLH-AAMNPAATDAVYFVARG 305 Query: 241 DGTSHFSSNLSEHNQAVNKYQR 262 DG+S FS+NL +HN AVNKYQR Sbjct: 306 DGSSQFSANLDDHNNAVNKYQR 327