BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0102.p         (86 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003776022.1| C4-dicarboxylate transport transmembrane pro...   147   6e-34
ref|YP_996611.1| C4-dicarboxylate transporter DctA [Verminephrob...   145   1e-33
emb|CAL61558.2| Aerobic C4-dicarboxylate transport protein [Herm...   135   1e-30
ref|YP_001353686.1| C4-dicarboxylate transporter DctA [Janthinob...   135   2e-30
ref|YP_001099685.1| C4-dicarboxylate transporter DctA [Herminiim...   135   3e-30

>ref|YP_003776022.1| C4-dicarboxylate transport transmembrane protein [Herbaspirillum
           seropedicae SmR1]
 gb|ADJ64114.1| C4-dicarboxylate transport transmembrane protein [Herbaspirillum
           seropedicae SmR1]
          Length = 441

 Score =  147 bits (371), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 72/86 (83%), Positives = 78/86 (90%)

Query: 1   VLAATLSAVGHVPVAGLALILGIDRFMSEARALTNTIGNGVATLVVAKWSNELDEKRLHA 60
           VLAATLSAVGHVPVAGLALILGIDRFMSEARALTNTIGNGVATLVVAKWS ELD +RL  
Sbjct: 356 VLAATLSAVGHVPVAGLALILGIDRFMSEARALTNTIGNGVATLVVAKWSGELDSERLTK 415

Query: 61  QLNNETSEEADEPEAVLDRTEAKIHH 86
            LNNET E+A  PE++LDRT+AK+HH
Sbjct: 416 VLNNETVEDAQAPESILDRTDAKMHH 441


>ref|YP_996611.1| C4-dicarboxylate transporter DctA [Verminephrobacter eiseniae
           EF01-2]
 sp|A1WIY6.1|DCTA_VEREI RecName: Full=C4-dicarboxylate transport protein
 gb|ABM57593.1| sodium:dicarboxylate symporter [Verminephrobacter eiseniae EF01-2]
          Length = 439

 Score =  145 bits (367), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 69/86 (80%), Positives = 80/86 (93%)

Query: 1   VLAATLSAVGHVPVAGLALILGIDRFMSEARALTNTIGNGVATLVVAKWSNELDEKRLHA 60
           VLAA+LSAVGH+PVAGLALILGIDRFMSEARALTNTIGNGVA++VVAKWS ELDE+RLHA
Sbjct: 354 VLAASLSAVGHLPVAGLALILGIDRFMSEARALTNTIGNGVASIVVAKWSKELDEQRLHA 413

Query: 61  QLNNETSEEADEPEAVLDRTEAKIHH 86
           QLN +T+EEA  P+A+ DR E++IHH
Sbjct: 414 QLNGQTAEEASAPQALPDRMESRIHH 439


>emb|CAL61558.2| Aerobic C4-dicarboxylate transport protein [Herminiimonas
           arsenicoxydans]
          Length = 452

 Score =  135 bits (341), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 67/84 (79%), Positives = 74/84 (88%)

Query: 1   VLAATLSAVGHVPVAGLALILGIDRFMSEARALTNTIGNGVATLVVAKWSNELDEKRLHA 60
           VLAATLSAVGHVPVAGLALILGIDRFMSEARALTNTIGNGVATLVVA+W N+LD + LHA
Sbjct: 367 VLAATLSAVGHVPVAGLALILGIDRFMSEARALTNTIGNGVATLVVARWGNDLDMQTLHA 426

Query: 61  QLNNETSEEADEPEAVLDRTEAKI 84
           QLNNET+  A+EPE +LD    K+
Sbjct: 427 QLNNETAVAANEPEKILDMVNNKL 450


>ref|YP_001353686.1| C4-dicarboxylate transporter DctA [Janthinobacterium sp. Marseille]
 sp|A6SZI9.1|DCTA_JANMA RecName: Full=C4-dicarboxylate transport protein
 gb|ABR88990.1| dicarboxylate/amino acid:cation (Na+ or H+) symporter, DAACS family
           [Janthinobacterium sp. Marseille]
          Length = 439

 Score =  135 bits (339), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 65/84 (77%), Positives = 75/84 (89%)

Query: 1   VLAATLSAVGHVPVAGLALILGIDRFMSEARALTNTIGNGVATLVVAKWSNELDEKRLHA 60
           VLAATLSAVGHVPVAGLALILGIDRFMSEARALTNTIGNGVATLVVAKW  +LD  +LHA
Sbjct: 354 VLAATLSAVGHVPVAGLALILGIDRFMSEARALTNTIGNGVATLVVAKWVGDLDMDKLHA 413

Query: 61  QLNNETSEEADEPEAVLDRTEAKI 84
           +L+NE+ + AD+PE +LD+T  K+
Sbjct: 414 ELDNESPQAADQPEKILDQTNTKL 437


>ref|YP_001099685.1| C4-dicarboxylate transporter DctA [Herminiimonas arsenicoxydans]
          Length = 421

 Score =  135 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 67/84 (79%), Positives = 74/84 (88%)

Query: 1   VLAATLSAVGHVPVAGLALILGIDRFMSEARALTNTIGNGVATLVVAKWSNELDEKRLHA 60
           VLAATLSAVGHVPVAGLALILGIDRFMSEARALTNTIGNGVATLVVA+W N+LD + LHA
Sbjct: 336 VLAATLSAVGHVPVAGLALILGIDRFMSEARALTNTIGNGVATLVVARWGNDLDMQTLHA 395

Query: 61  QLNNETSEEADEPEAVLDRTEAKI 84
           QLNNET+  A+EPE +LD    K+
Sbjct: 396 QLNNETAVAANEPEKILDMVNNKL 419