BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0092.p (448 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775632.1| hypothetical protein Hsero_2225 [Herbaspiril... 719 0.0 ref|YP_003451492.1| hypothetical protein AZL_b02850 [Azospirillu... 639 0.0 ref|YP_001893323.1| protein of unknown function DUF1446 [Ralston... 625 e-177 ref|YP_004753980.1| hypothetical protein CFU_3333 [Collimonas fu... 623 e-176 ref|YP_426562.1| hypothetical protein Rru_A1474 [Rhodospirillum ... 620 e-175 >ref|YP_003775632.1| hypothetical protein Hsero_2225 [Herbaspirillum seropedicae SmR1] gb|ADJ63724.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 451 Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust. Identities = 353/446 (79%), Positives = 402/446 (90%), Gaps = 2/446 (0%) Query: 2 KTIRIGAGSGNGYSGDRIEPAVELAEKGDLDYLIFECLAERTIAIGQQARRADPQKGYDP 61 + +RIGAG+G YSGDRIEPA ELAE+G+LDYLIFECLAERTIAIGQQAR ADP KGYDP Sbjct: 7 RKVRIGAGAG--YSGDRIEPAAELAERGELDYLIFECLAERTIAIGQQARLADPTKGYDP 64 Query: 62 LLADRMHAVLKLCADKGIKIITNMGAANPLAGAARIREIALQLGLSHLKIASICGDDVLE 121 LLA+RMHAVLK CADKG++IITNMGAANP A A R+REIA LGL+HLK+A++ GDDVL+ Sbjct: 65 LLAERMHAVLKTCADKGVRIITNMGAANPAAAAQRVREIARTLGLAHLKVAAVTGDDVLQ 124 Query: 122 ILQQGDYRVEDNGLPVKSLGDKLISANAYLGAQPIVDALKAGADVVITGRIADPALALGP 181 +Q+GD+R+EDNG PV SLG++LISANAYLG PI++AL+AGADV+ITGR+ADPAL L P Sbjct: 125 AVQEGDFRIEDNGQPVSSLGERLISANAYLGVAPILEALQAGADVIITGRVADPALVLAP 184 Query: 182 LIHEFGWAMDDWQRLGQGTVVGHLLECAGQITGGYFADPGVKDVKDLARLGFPIGEVSED 241 L+HEFGWA DDW +LGQGT+VGHLLECAGQITGGYFADPG KDV LARLGFPIGEVS D Sbjct: 185 LVHEFGWAADDWDKLGQGTLVGHLLECAGQITGGYFADPGKKDVAGLARLGFPIGEVSAD 244 Query: 242 GSVVITKVAGSGGQVTAATCKEQLLYEIHNPAAYFTPDVIADFSQVTITEVGPDRVAISG 301 GS VITKVAGSGGQVTA TCKEQLLYEIH+P+AY+TPDV+ADFSQV ITE+GPDRVA+SG Sbjct: 245 GSAVITKVAGSGGQVTAQTCKEQLLYEIHDPSAYYTPDVVADFSQVQITEIGPDRVAVSG 304 Query: 302 GNGRARPATLKTTLGYIDSYVGEGQISYAGPGAQARGQLALDIVRERLALTGVQTDEVRY 361 G GRARPATLKTTLGY DS++GEGQISYAGPGAQAR QLA +IVRERLALTGV+TDE+R Sbjct: 305 GRGRARPATLKTTLGYRDSFIGEGQISYAGPGAQARAQLAAEIVRERLALTGVETDELRL 364 Query: 362 DLIGVNAIHGAQLSAAVNEPYEVRARVAGRTASLREAIRIGNEVETLYTCGPAGGGGATK 421 DLIG+NAI G Q+SA EPYEVR RV+GRTAS+++A+RIGNEVETLYT GPAGGGGATK Sbjct: 365 DLIGMNAIAGPQMSAGAPEPYEVRLRVSGRTASMQQAVRIGNEVETLYTNGPAGGGGATK 424 Query: 422 SAREVIAVLSMLLPRELVAPAIHFEE 447 SAREVIAVLS+LLPR LV P++H EE Sbjct: 425 SAREVIAVLSLLLPRSLVHPSVHIEE 450 >ref|YP_003451492.1| hypothetical protein AZL_b02850 [Azospirillum sp. B510] dbj|BAI74948.1| hypothetical protein AZL_b02850 [Azospirillum sp. B510] Length = 447 Score = 639 bits (1648), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/448 (73%), Positives = 379/448 (84%), Gaps = 3/448 (0%) Query: 1 MKTIRIGAGSGNGYSGDRIEPAVELAEKGDLDYLIFECLAERTIAIGQQARRADPQKGYD 60 MKTIRIG SG GYSGDRIEPAVELAEKGD+ YL+FECLAERTIAI Q A+ DP +GYD Sbjct: 1 MKTIRIG--SGAGYSGDRIEPAVELAEKGDIQYLVFECLAERTIAIAQGAKLKDPAQGYD 58 Query: 61 PLLADRMHAVLKLCADKGIKIITNMGAANPLAGAARIREIALQLGLSHLKIASICGDDVL 120 PLLA+RM AVL+ C +KGI+IITNMGAANP A AAR REIA LGL L+IA++ GDDVL Sbjct: 59 PLLAERMLAVLRPCREKGIRIITNMGAANPAAAAARTREIARSLGLGGLRIAAVSGDDVL 118 Query: 121 EILQQGDYRVEDNGLPVKSLGDKLISANAYLGAQPIVDALKAGADVVITGRIADPALALG 180 E L+ GD+R+E+ G PV ++ KL+SANAYLGA PIV+ALKAGAD+VITGR+ADPAL L Sbjct: 119 ETLKSGDHRIEETGEPVSAMAGKLVSANAYLGAAPIVEALKAGADIVITGRVADPALFLA 178 Query: 181 PLIHEFGWAMDDWQRLGQGTVVGHLLECAGQITGGYFADPGVKDVKDLARLGFPIGEVSE 240 P I EFGW+M+DW LG+GTVVGHLLECAGQITGGYFADPGVKDV LARLGFPI EV E Sbjct: 179 PQIFEFGWSMEDWDLLGKGTVVGHLLECAGQITGGYFADPGVKDVAGLARLGFPIAEVGE 238 Query: 241 DGSVVITKVAGSGGQVTAATCKEQLLYEIHNPAAYFTPDVIADFSQVTITEVGPDRVAIS 300 DGS +ITKVAGSGG VT ATCKEQLLYEIH+PAAY TPDV+ADFS+V + GPDRV +S Sbjct: 239 DGSAIITKVAGSGGAVTTATCKEQLLYEIHDPAAYLTPDVVADFSRVRFVQEGPDRVRVS 298 Query: 301 GGNGRARPATLKTTLGYIDSYVGEGQISYAGPGAQARGQLALDIVRERLALTGVQTDEVR 360 G +GR RPATLK ++GY+DS++GEGQISYAGPGA ARG+LAL+IVRERLALTGV E+R Sbjct: 299 GASGRPRPATLKVSVGYLDSFIGEGQISYAGPGALARGRLALEIVRERLALTGVAASELR 358 Query: 361 YDLIGVNAIHGAQLSAA-VNEPYEVRARVAGRTASLREAIRIGNEVETLYTCGPAGGGGA 419 +DL+GV++IHG LS A EPYEVR RV GRTASL+EA RIGNEVETLYT GPA GGGA Sbjct: 359 FDLLGVDSIHGGALSTAGGREPYEVRVRVVGRTASLKEAQRIGNEVETLYTNGPASGGGA 418 Query: 420 TKSAREVIAVLSMLLPRELVAPAIHFEE 447 TKSA++V+A+LS LLPREL APAI + E Sbjct: 419 TKSAKDVVAMLSALLPRELAAPAIEYRE 446 >ref|YP_001893323.1| protein of unknown function DUF1446 [Ralstonia pickettii 12J] ref|YP_002983666.1| hypothetical protein Rpic12D_3735 [Ralstonia pickettii 12D] gb|ACD29896.1| protein of unknown function DUF1446 [Ralstonia pickettii 12J] gb|ACS64994.1| protein of unknown function DUF1446 [Ralstonia pickettii 12D] Length = 451 Score = 625 bits (1612), Expect = e-177, Method: Compositional matrix adjust. Identities = 313/450 (69%), Positives = 361/450 (80%), Gaps = 5/450 (1%) Query: 1 MKTIRIGAGSGNGYSGDRIEPAVELAEKGDLDYLIFECLAERTIAIGQQARRADPQKGYD 60 +KT+RIG G+G YSGDRIEPA+ELAE GD+D L+FECLAERTIA+ QQ RR DP GYD Sbjct: 5 LKTLRIGGGAG--YSGDRIEPALELAEHGDIDVLMFECLAERTIALAQQVRRKDPSHGYD 62 Query: 61 PLLADRMHAVLKLCADKGIKIITNMGAANPLAGAARIREIALQLGLSHLKIASICGDDVL 120 PLL RM AVL CA +GI+I+TNMGAANP A A R R+IA +LGL L++A++ GDDV Sbjct: 63 PLLEARMRAVLPACAARGIRIVTNMGAANPQAAAERTRDIARELGLK-LRVAAVTGDDVF 121 Query: 121 EILQQ--GDYRVEDNGLPVKSLGDKLISANAYLGAQPIVDALKAGADVVITGRIADPALA 178 ++LQ D+ + D G PV SL +++SANAYLGAQ IVDAL GADVVITGR+ADPALA Sbjct: 122 DLLQARGQDFTLMDGGAPVASLHARMVSANAYLGAQGIVDALAQGADVVITGRVADPALA 181 Query: 179 LGPLIHEFGWAMDDWQRLGQGTVVGHLLECAGQITGGYFADPGVKDVKDLARLGFPIGEV 238 LGPL+H FGW MDDW RLG GT+ GHLLECAGQITGGYFADPG+KDV DLARLGFPIGEV Sbjct: 182 LGPLVHAFGWRMDDWHRLGCGTLAGHLLECAGQITGGYFADPGIKDVPDLARLGFPIGEV 241 Query: 239 SEDGSVVITKVAGSGGQVTAATCKEQLLYEIHNPAAYFTPDVIADFSQVTITEVGPDRVA 298 EDGSV+ITKVA +GG VT ATCKEQLLYEIH+PA Y TPDV+ADFS V + G DRV Sbjct: 242 GEDGSVLITKVATAGGLVTEATCKEQLLYEIHDPARYLTPDVVADFSNVRMHSGGKDRVV 301 Query: 299 ISGGNGRARPATLKTTLGYIDSYVGEGQISYAGPGAQARGQLALDIVRERLALTGVQTDE 358 I G G R LK ++GY+DSY+GEGQISYAGP A ARG+LALDIVRERLALTGVQT E Sbjct: 302 IEGATGTPRTGQLKVSIGYLDSYIGEGQISYAGPNAVARGKLALDIVRERLALTGVQTTE 361 Query: 359 VRYDLIGVNAIHGAQLSAAVNEPYEVRARVAGRTASLREAIRIGNEVETLYTCGPAGGGG 418 R++LIGV+A+HGA LS EPYEVR RVA RT S+ EA+RIGNEVETL TCGP+GGGG Sbjct: 362 ARFELIGVDALHGAALSRTDAEPYEVRVRVAARTESMAEAVRIGNEVETLLTCGPSGGGG 421 Query: 419 ATKSAREVIAVLSMLLPRELVAPAIHFEEN 448 ATKSARE+IAV S L+P EL A+H E+ Sbjct: 422 ATKSAREIIAVASTLIPAELAPHAVHILES 451 >ref|YP_004753980.1| hypothetical protein CFU_3333 [Collimonas fungivorans Ter331] gb|AEK63157.1| Protein of unknown function DUF1446 [Collimonas fungivorans Ter331] Length = 442 Score = 623 bits (1607), Expect = e-176, Method: Compositional matrix adjust. Identities = 320/446 (71%), Positives = 378/446 (84%), Gaps = 4/446 (0%) Query: 1 MKTIRIGAGSGNGYSGDRIEPAVELAEKGDLDYLIFECLAERTIAIGQQARRADPQKGYD 60 M+ IRIGAG+G YSGDRIEPA+ELAEKG++DYL+FECLAERTIAI QQ R DP G+D Sbjct: 1 MRHIRIGAGAG--YSGDRIEPAIELAEKGEIDYLVFECLAERTIAIAQQTRMKDPALGFD 58 Query: 61 PLLADRMHAVLKLCADKGIKIITNMGAANPLAGAARIREIALQLGLSHLKIASICGDDVL 120 PLLA+RM AVL +C++K IKIITNMGAANPLA AA +R+IA + L LK+A++ GDDVL Sbjct: 59 PLLAERMQAVLAICSEKKIKIITNMGAANPLAAAAMVRQIAQAMHLK-LKVAAVTGDDVL 117 Query: 121 EILQQGDYRVEDNGLPVKSLGDKLISANAYLGAQPIVDALKAGADVVITGRIADPALALG 180 + L+ GDY D + V SLGDKL+SANAY+GA P+V+AL GADV+ITGR+ADPAL L Sbjct: 118 DTLKAGDY-TSDQDIAVNSLGDKLLSANAYIGAAPLVEALAQGADVIITGRVADPALFLA 176 Query: 181 PLIHEFGWAMDDWQRLGQGTVVGHLLECAGQITGGYFADPGVKDVKDLARLGFPIGEVSE 240 PLIHEF WAMDDW+RLGQGT+VGHLLECAGQ++GGYFADPG KDV+ LARLGFPIGEV+E Sbjct: 177 PLIHEFNWAMDDWRRLGQGTLVGHLLECAGQVSGGYFADPGYKDVQGLARLGFPIGEVAE 236 Query: 241 DGSVVITKVAGSGGQVTAATCKEQLLYEIHNPAAYFTPDVIADFSQVTITEVGPDRVAIS 300 DGSVVITKVAGSGGQVTAATCKEQLLYEIH+PA+Y TPDV+ADFS T+ ++GPDRV + Sbjct: 237 DGSVVITKVAGSGGQVTAATCKEQLLYEIHDPASYLTPDVVADFSAATVEQIGPDRVLVR 296 Query: 301 GGNGRARPATLKTTLGYIDSYVGEGQISYAGPGAQARGQLALDIVRERLALTGVQTDEVR 360 G GRARP TLK ++GYIDSY+GEGQISYAGPGA ARG+LA IV ERL L+ DE+R Sbjct: 297 GATGRARPDTLKVSIGYIDSYIGEGQISYAGPGALARGKLAQAIVAERLQLSAAAFDEIR 356 Query: 361 YDLIGVNAIHGAQLSAAVNEPYEVRARVAGRTASLREAIRIGNEVETLYTCGPAGGGGAT 420 YDL+GV+AIHGA LSA +EPYEVR RV+ R+ ++R+AIRIGNEVETLYTCGPAGGGGAT Sbjct: 357 YDLLGVDAIHGAALSAQASEPYEVRVRVSARSGNMRDAIRIGNEVETLYTCGPAGGGGAT 416 Query: 421 KSAREVIAVLSMLLPRELVAPAIHFE 446 K+A+EV+AV S LLPR V ++HFE Sbjct: 417 KAAKEVVAVQSCLLPRRQVTTSVHFE 442 >ref|YP_426562.1| hypothetical protein Rru_A1474 [Rhodospirillum rubrum ATCC 11170] gb|ABC22275.1| Protein of unknown function DUF1446 [Rhodospirillum rubrum ATCC 11170] gb|AEO47993.1| hypothetical protein F11_07615 [Rhodospirillum rubrum F11] Length = 445 Score = 620 bits (1598), Expect = e-175, Method: Compositional matrix adjust. Identities = 311/447 (69%), Positives = 362/447 (80%), Gaps = 3/447 (0%) Query: 1 MKTIRIGAGSGNGYSGDRIEPAVELAEKGDLDYLIFECLAERTIAIGQQARRADPQKGYD 60 MKTIRIG SG GYSGDRIEPAVEL EKGD+ YL+FECLAERTIAI QQA+ DP KGYD Sbjct: 1 MKTIRIG--SGAGYSGDRIEPAVELVEKGDIGYLVFECLAERTIAIAQQAKLNDPTKGYD 58 Query: 61 PLLADRMHAVLKLCADKGIKIITNMGAANPLAGAARIREIALQLGLSHLKIASICGDDVL 120 PLLA+RM AVL LC KG+KIITNMGAANP A AA++REIA LGL LK+A++ GDDVL Sbjct: 59 PLLAERMQAVLTLCKQKGVKIITNMGAANPQAAAAKVREIAGSLGLKSLKVAAVSGDDVL 118 Query: 121 EILQQGDYRVEDNGLPVKSLGDKLISANAYLGAQPIVDALKAGADVVITGRIADPALALG 180 ++L+ GD + + G + + L+SANAYLGA PIV+AL GADVVITGR+ADP+L L Sbjct: 119 DVLKTGDVTISETGERASGMSNVLVSANAYLGAAPIVEALANGADVVITGRVADPSLFLA 178 Query: 181 PLIHEFGWAMDDWQRLGQGTVVGHLLECAGQITGGYFADPGVKDVKDLARLGFPIGEVSE 240 P I EFGWA+DDW RLG+GTVVGHLLEC GQ+TGGYFA+PG KDV DLARLGFPI EV E Sbjct: 179 PQIFEFGWALDDWDRLGKGTVVGHLLECGGQVTGGYFAEPGKKDVADLARLGFPIAEVGE 238 Query: 241 DGSVVITKVAGSGGQVTAATCKEQLLYEIHNPAAYFTPDVIADFSQVTITEVGPDRVAIS 300 DG VITKVAGSGG+VT TCKEQLLYE+H+P Y TPDV ADFS + +TE+ PDRV + Sbjct: 239 DGGAVITKVAGSGGRVTVDTCKEQLLYEVHDPKTYLTPDVTADFSALRVTEIAPDRVRVE 298 Query: 301 GGNGRARPATLKTTLGYIDSYVGEGQISYAGPGAQARGQLALDIVRERLALTGVQTDEVR 360 G GRARP TLK ++GY+D Y+GEGQISYAG GA ARG+LAL+IV+ERLALTGVQT E+R Sbjct: 299 GATGRARPETLKVSVGYVDGYMGEGQISYAGRGALARGRLALEIVKERLALTGVQTSELR 358 Query: 361 YDLIGVNAIHGAQLSAAVNEPYEVRARVAGRTASLREAIRIGNEVETLYTCGPAGGGGAT 420 +DLIGVN+IHG L A V EP EVR RV GRT +L+EA+RIGNEVETLYT GPA GGGAT Sbjct: 359 FDLIGVNSIHGEVL-APVPEPTEVRVRVVGRTETLKEAVRIGNEVETLYTNGPASGGGAT 417 Query: 421 KSAREVIAVLSMLLPRELVAPAIHFEE 447 KSA++V+A+LS LLPR P + + E Sbjct: 418 KSAKQVVAMLSALLPRAQATPVVAYLE 444