BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0091.p         (103 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775631.1| hypothetical protein Hsero_2224 [Herbaspiril...   162   1e-38
ref|YP_004753981.1| hypothetical protein CFU_3334 [Collimonas fu...   159   9e-38
ref|YP_001238966.1| hypothetical protein BBta_2933 [Bradyrhizobi...   152   2e-35
ref|YP_426561.1| hypothetical protein Rru_A1473 [Rhodospirillum ...   151   3e-35
ref|YP_530713.1| hypothetical protein RPC_0824 [Rhodopseudomonas...   150   4e-35

>ref|YP_003775631.1| hypothetical protein Hsero_2224 [Herbaspirillum seropedicae SmR1]
 gb|ADJ63723.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 100

 Score =  162 bits (410), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 81/99 (81%), Positives = 88/99 (88%)

Query: 1  MLLRDIAHSRAGDKGDISNISVIAYDLKDYALLEKHLTTERVKAHFAGVVQGDVVRYELP 60
          MLLR+IAHSRAGDKGDISNISVIAY  +DY LLE+ LT ERV+AHFAGVV G+VVR+ LP
Sbjct: 1  MLLREIAHSRAGDKGDISNISVIAYRQEDYPLLERELTAERVRAHFAGVVHGEVVRHALP 60

Query: 61 HLGALNFVMQHALGGGVTRSLALDAHGKSLSGAMLSITL 99
          HLGALNFVMQ ALGGGVTRSLALDAHGKSLSG ML + L
Sbjct: 61 HLGALNFVMQRALGGGVTRSLALDAHGKSLSGVMLDLEL 99


>ref|YP_004753981.1| hypothetical protein CFU_3334 [Collimonas fungivorans Ter331]
 gb|AEK63158.1| hypothetical protein CFU_3334 [Collimonas fungivorans Ter331]
          Length = 110

 Score =  159 bits (403), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 76/101 (75%), Positives = 89/101 (88%)

Query: 1   MLLRDIAHSRAGDKGDISNISVIAYDLKDYALLEKHLTTERVKAHFAGVVQGDVVRYELP 60
           M LR++AHSRAGDKGDISNISVIAY  KDYALLEK+LT ERVKAHF G+ QG+V+RY LP
Sbjct: 5   MKLRELAHSRAGDKGDISNISVIAYLEKDYALLEKYLTPERVKAHFVGIAQGEVLRYALP 64

Query: 61  HLGALNFVMQHALGGGVTRSLALDAHGKSLSGAMLSITLPE 101
            +GALNFVMQ ALGGGVTRSLALDAHGK LS A++++ +P+
Sbjct: 65  SIGALNFVMQRALGGGVTRSLALDAHGKCLSSAIMTMEIPD 105


>ref|YP_001238966.1| hypothetical protein BBta_2933 [Bradyrhizobium sp. BTAi1]
 gb|ABQ35060.1| hypothetical protein BBta_2933 [Bradyrhizobium sp. BTAi1]
          Length = 107

 Score =  152 bits (383), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 75/99 (75%), Positives = 83/99 (83%)

Query: 1  MLLRDIAHSRAGDKGDISNISVIAYDLKDYALLEKHLTTERVKAHFAGVVQGDVVRYELP 60
          M LRDIAHSR GDKGD SNISVIAYD K Y LL   +T ERV+AHFAG+VQG+VVRYELP
Sbjct: 1  MKLRDIAHSRTGDKGDTSNISVIAYDPKHYPLLLAQVTAERVRAHFAGIVQGEVVRYELP 60

Query: 61 HLGALNFVMQHALGGGVTRSLALDAHGKSLSGAMLSITL 99
          ++ ALNFVM  ALGGGVTRSLALDAHGKSLS A+L + L
Sbjct: 61 NIAALNFVMSRALGGGVTRSLALDAHGKSLSSALLDLEL 99


>ref|YP_426561.1| hypothetical protein Rru_A1473 [Rhodospirillum rubrum ATCC 11170]
 gb|ABC22274.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170]
 gb|AEO47992.1| hypothetical protein F11_07610 [Rhodospirillum rubrum F11]
          Length = 104

 Score =  151 bits (381), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 72/101 (71%), Positives = 84/101 (83%)

Query: 1   MLLRDIAHSRAGDKGDISNISVIAYDLKDYALLEKHLTTERVKAHFAGVVQGDVVRYELP 60
           M L DIAHSR GDKGDISNISVIAYD KDY LL   +T+ERVKAHF G+V G+V+RYE+P
Sbjct: 1   MKLFDIAHSRTGDKGDISNISVIAYDPKDYPLLAAQVTSERVKAHFTGIVHGEVIRYEIP 60

Query: 61  HLGALNFVMQHALGGGVTRSLALDAHGKSLSGAMLSITLPE 101
            LGALNFVM  ALGGGVT+SLALDAHGK L+ A+L + +P+
Sbjct: 61  SLGALNFVMHKALGGGVTKSLALDAHGKCLASALLDLDIPD 101


>ref|YP_530713.1| hypothetical protein RPC_0824 [Rhodopseudomonas palustris BisB18]
 gb|ABD86394.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
          Length = 103

 Score =  150 bits (380), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 74/100 (74%), Positives = 82/100 (82%)

Query: 1   MLLRDIAHSRAGDKGDISNISVIAYDLKDYALLEKHLTTERVKAHFAGVVQGDVVRYELP 60
           M L DIAHSR GDKG+ISNISVI YD KDY L+  HLT ERVK HF G+V GDVVRYE P
Sbjct: 1   MKLFDIAHSRTGDKGNISNISVIVYDQKDYDLVRDHLTAERVKDHFKGIVHGDVVRYEAP 60

Query: 61  HLGALNFVMQHALGGGVTRSLALDAHGKSLSGAMLSITLP 100
            LGALNFVMQ ALGGGVTRSLALDAHGK L+ A+L++ +P
Sbjct: 61  SLGALNFVMQDALGGGVTRSLALDAHGKCLASALLAMEIP 100