BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0074.p         (211 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775617.1| organic radical activating enzyme protein [H...   365   2e-99
ref|YP_001099678.1| hypothetical protein HEAR1379 [Herminiimonas...   365   3e-99
emb|CAL61551.2| Conserved hypothetical protein [Herminiimonas ar...   364   5e-99
ref|YP_004752028.1| queuosine Biosynthesis [Collimonas fungivora...   362   2e-98
ref|YP_001353700.1| organic radical activating enzyme [Janthinob...   360   8e-98

>ref|YP_003775617.1| organic radical activating enzyme protein [Herbaspirillum
           seropedicae SmR1]
 gb|ADJ63709.1| organic radical activating enzyme protein [Herbaspirillum
           seropedicae SmR1]
          Length = 229

 Score =  365 bits (938), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 175/211 (82%), Positives = 186/211 (88%)

Query: 1   VTYSIKEIFYTLQGEGTHAGRPAVFCRFSGCNLWTGREEDRSKAICQFCDTDFVGTDGEG 60
           VTYSIKEIFYTLQGEG HAGRPAVFCRFSGCNLWTGREEDR +AICQFCDTDFVGTDGE 
Sbjct: 19  VTYSIKEIFYTLQGEGAHAGRPAVFCRFSGCNLWTGREEDRVRAICQFCDTDFVGTDGEN 78

Query: 61  GGKFKTSDALAQTINNLWPETYAASKYVVFTGGEPLLQLDEALIASMHAVGFEIAIETNG 120
           GGKFK+   LA  I++LWP  YA SKYVVFTGGEPLLQLD ALI +MHAVGFEIAIETNG
Sbjct: 79  GGKFKSPAELAAKIDSLWPARYAPSKYVVFTGGEPLLQLDAALIEAMHAVGFEIAIETNG 138

Query: 121 TIPVPPGVDWICVSPKMGSELKVFKGSELKVVIPQQAQVLADYEKLDFAHFLLQPMDGPD 180
           TI VP GVDWICVSPKMGSELKV +GSELKVV+PQ  Q L +YEKLDF HFLLQPMDG  
Sbjct: 139 TIDVPDGVDWICVSPKMGSELKVRRGSELKVVVPQPGQPLDEYEKLDFQHFLLQPMDGLQ 198

Query: 181 AARNTKMAIELVKNNPKWKLSIQTHKLLQIP 211
           AA NT++AIE+VKNNPKWKLSIQTHKLL IP
Sbjct: 199 AAANTRLAIEMVKNNPKWKLSIQTHKLLNIP 229


>ref|YP_001099678.1| hypothetical protein HEAR1379 [Herminiimonas arsenicoxydans]
          Length = 248

 Score =  365 bits (936), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 171/211 (81%), Positives = 185/211 (87%)

Query: 1   VTYSIKEIFYTLQGEGTHAGRPAVFCRFSGCNLWTGREEDRSKAICQFCDTDFVGTDGEG 60
           +TYSIKEIFYTLQGEG HAGRPAVFCRFSGCNLWTGRE DR+ A+CQFCDTDFVGTDGEG
Sbjct: 38  LTYSIKEIFYTLQGEGAHAGRPAVFCRFSGCNLWTGRESDRATAVCQFCDTDFVGTDGEG 97

Query: 61  GGKFKTSDALAQTINNLWPETYAASKYVVFTGGEPLLQLDEALIASMHAVGFEIAIETNG 120
           GGKF  +  LA TIN LWP +YAASKYVVFTGGEPLLQLD  LI +MHAVGFEIAIETNG
Sbjct: 98  GGKFADAVKLANTINALWPASYAASKYVVFTGGEPLLQLDTELINAMHAVGFEIAIETNG 157

Query: 121 TIPVPPGVDWICVSPKMGSELKVFKGSELKVVIPQQAQVLADYEKLDFAHFLLQPMDGPD 180
           T+PVP GVDWICVSPKMGS+L V KGSELKVVIPQ AQ LA YE LDF HF +QPMDGP 
Sbjct: 158 TLPVPAGVDWICVSPKMGSQLVVRKGSELKVVIPQLAQSLAAYEDLDFQHFFVQPMDGPL 217

Query: 181 AARNTKMAIELVKNNPKWKLSIQTHKLLQIP 211
           A +NT++AIE+ K NPKWKLS+QTHKLLQIP
Sbjct: 218 AEQNTRLAIEICKKNPKWKLSLQTHKLLQIP 248


>emb|CAL61551.2| Conserved hypothetical protein [Herminiimonas arsenicoxydans]
          Length = 211

 Score =  364 bits (934), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 171/211 (81%), Positives = 185/211 (87%)

Query: 1   VTYSIKEIFYTLQGEGTHAGRPAVFCRFSGCNLWTGREEDRSKAICQFCDTDFVGTDGEG 60
           +TYSIKEIFYTLQGEG HAGRPAVFCRFSGCNLWTGRE DR+ A+CQFCDTDFVGTDGEG
Sbjct: 1   MTYSIKEIFYTLQGEGAHAGRPAVFCRFSGCNLWTGRESDRATAVCQFCDTDFVGTDGEG 60

Query: 61  GGKFKTSDALAQTINNLWPETYAASKYVVFTGGEPLLQLDEALIASMHAVGFEIAIETNG 120
           GGKF  +  LA TIN LWP +YAASKYVVFTGGEPLLQLD  LI +MHAVGFEIAIETNG
Sbjct: 61  GGKFADAVKLANTINALWPASYAASKYVVFTGGEPLLQLDTELINAMHAVGFEIAIETNG 120

Query: 121 TIPVPPGVDWICVSPKMGSELKVFKGSELKVVIPQQAQVLADYEKLDFAHFLLQPMDGPD 180
           T+PVP GVDWICVSPKMGS+L V KGSELKVVIPQ AQ LA YE LDF HF +QPMDGP 
Sbjct: 121 TLPVPAGVDWICVSPKMGSQLVVRKGSELKVVIPQLAQSLAAYEDLDFQHFFVQPMDGPL 180

Query: 181 AARNTKMAIELVKNNPKWKLSIQTHKLLQIP 211
           A +NT++AIE+ K NPKWKLS+QTHKLLQIP
Sbjct: 181 AEQNTRLAIEICKKNPKWKLSLQTHKLLQIP 211


>ref|YP_004752028.1| queuosine Biosynthesis [Collimonas fungivorans Ter331]
 gb|AEK61205.1| Queuosine Biosynthesis [Collimonas fungivorans Ter331]
          Length = 211

 Score =  362 bits (929), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 172/211 (81%), Positives = 184/211 (87%)

Query: 1   VTYSIKEIFYTLQGEGTHAGRPAVFCRFSGCNLWTGREEDRSKAICQFCDTDFVGTDGEG 60
           +TYSIKEIFYTLQGEGTHAGRPAVFCRFSGCNLW+GREEDRS A+CQFCDTDFVGTDGEG
Sbjct: 1   MTYSIKEIFYTLQGEGTHAGRPAVFCRFSGCNLWSGREEDRSTAVCQFCDTDFVGTDGEG 60

Query: 61  GGKFKTSDALAQTINNLWPETYAASKYVVFTGGEPLLQLDEALIASMHAVGFEIAIETNG 120
           GGKFK S ALA TIN LWPETYAASK+VVFTGGEPLLQLD ALI SMHA GFEIAIETNG
Sbjct: 61  GGKFKDSAALADTINALWPETYAASKFVVFTGGEPLLQLDAALIDSMHAAGFEIAIETNG 120

Query: 121 TIPVPPGVDWICVSPKMGSELKVFKGSELKVVIPQQAQVLADYEKLDFAHFLLQPMDGPD 180
           T+  PPG+DWICVSPKMGS LK+ KG+ELKVVIPQ  Q LA YE LDF HF +Q MDGP 
Sbjct: 121 TLLPPPGIDWICVSPKMGSVLKLRKGNELKVVIPQVGQSLAAYESLDFEHFYVQAMDGPQ 180

Query: 181 AARNTKMAIELVKNNPKWKLSIQTHKLLQIP 211
            A N ++AIE  K NPKWKLS+QTHKLLQIP
Sbjct: 181 LAHNLELAIETCKRNPKWKLSLQTHKLLQIP 211


>ref|YP_001353700.1| organic radical activating enzyme [Janthinobacterium sp. Marseille]
 gb|ABR90052.1| organic radical activating enzyme [Janthinobacterium sp. Marseille]
          Length = 211

 Score =  360 bits (924), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 168/211 (79%), Positives = 184/211 (87%)

Query: 1   VTYSIKEIFYTLQGEGTHAGRPAVFCRFSGCNLWTGREEDRSKAICQFCDTDFVGTDGEG 60
           +TYS+KEIFYTLQGEG HAGRPAVFCRFSGCNLWTGRE DR+ A+CQFCDTDFVGT+GEG
Sbjct: 1   MTYSVKEIFYTLQGEGAHAGRPAVFCRFSGCNLWTGRESDRATAVCQFCDTDFVGTNGEG 60

Query: 61  GGKFKTSDALAQTINNLWPETYAASKYVVFTGGEPLLQLDEALIASMHAVGFEIAIETNG 120
           GGKF     LA TIN LWPE+YAASKYVVFTGGEPLLQLD  LI +MHAVGFEIAIETNG
Sbjct: 61  GGKFVDGSTLAHTINALWPESYAASKYVVFTGGEPLLQLDTELIDAMHAVGFEIAIETNG 120

Query: 121 TIPVPPGVDWICVSPKMGSELKVFKGSELKVVIPQQAQVLADYEKLDFAHFLLQPMDGPD 180
           T+PVP GVDWICVSPKMGS+L V KGSELKVVIPQ  Q LA YE L+F HF +QPMDGP 
Sbjct: 121 TLPVPAGVDWICVSPKMGSQLVVRKGSELKVVIPQAEQSLAAYEALEFEHFFVQPMDGPL 180

Query: 181 AARNTKMAIELVKNNPKWKLSIQTHKLLQIP 211
           A +NTK+AI++ K NPKWKLS+QTHKLLQIP
Sbjct: 181 AEQNTKLAIDVCKRNPKWKLSLQTHKLLQIP 211