BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0068.p         (274 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775613.1| GMP synthase [Herbaspirillum seropedicae SmR...   536   e-150
ref|YP_004752014.1| GMP synthase glutamine-hydrolyzing [Collimon...   531   e-149
ref|ZP_08274508.1| GMP synthase (glutamine-hydrolyzing) [Oxaloba...   503   e-140
ref|YP_001353722.1| GMP synthase [Janthinobacterium sp. Marseill...   501   e-140
ref|YP_001797407.1| GMP synthase [Polynucleobacter necessarius s...   501   e-140

>ref|YP_003775613.1| GMP synthase [Herbaspirillum seropedicae SmR1]
 emb|CAM32587.1| GMP synthase protein [Herbaspirillum seropedicae]
 gb|ADJ63705.1| GMP synthase protein [Herbaspirillum seropedicae SmR1]
          Length = 530

 Score =  536 bits (1382), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 262/274 (95%), Positives = 266/274 (97%)

Query: 1   VFVDHGLLRLDEGKMVMEMFGKNLGVKVIHVDATDQFMGHLAGVTDPEAKRKIIGREFVE 60
           VFVDHGLLRLDEGKMVMEMF KNLGVKVIHVDAT QFMGHLAGVTDPEAKRKIIGREFVE
Sbjct: 257 VFVDHGLLRLDEGKMVMEMFAKNLGVKVIHVDATAQFMGHLAGVTDPEAKRKIIGREFVE 316

Query: 61  VFQAESGKLKNAKWLAQGTIYPDVIESAGKGKKGAHTIKSHHNVGGLPETLNLKLLEPLR 120
           VFQAES KL +AKWLAQGTIYPDVIESAGKGKK AHTIKSHHNVGGLPETLNLKLLEPLR
Sbjct: 317 VFQAESAKLTSAKWLAQGTIYPDVIESAGKGKKTAHTIKSHHNVGGLPETLNLKLLEPLR 376

Query: 121 ELFKDEVRELGVALGLPHEMVYRHPFPGPGLGVRILGEVKKEFADLLRRADAIFIEELRN 180
           ELFKDEVRELGVALGLP EMVYRHPFPGPGLGVRILGEVKKE+ADLLRRADAIFIEELRN
Sbjct: 377 ELFKDEVRELGVALGLPPEMVYRHPFPGPGLGVRILGEVKKEYADLLRRADAIFIEELRN 436

Query: 181 TKDADGQSWYEKTSQAFAVFLPVKSVGVMGDGRTYEYVVALRAVQTQDFMTAHWAHLPHE 240
           TKD DGQ+WYEKTSQAFAVFLPVKSVGVMGDGRTYEYVVALRAVQTQDFMTAHWAHLPHE
Sbjct: 437 TKDEDGQTWYEKTSQAFAVFLPVKSVGVMGDGRTYEYVVALRAVQTQDFMTAHWAHLPHE 496

Query: 241 LLGHVSNRIINEVRGINRVVYDISGKPPATIEWE 274
           LLG VSNRIINEVRG+NRVVYDISGKPPATIEWE
Sbjct: 497 LLGRVSNRIINEVRGLNRVVYDISGKPPATIEWE 530


>ref|YP_004752014.1| GMP synthase glutamine-hydrolyzing [Collimonas fungivorans Ter331]
 gb|AEK61191.1| GMP synthase glutamine-hydrolyzing [Collimonas fungivorans Ter331]
          Length = 526

 Score =  531 bits (1367), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 257/274 (93%), Positives = 264/274 (96%)

Query: 1   VFVDHGLLRLDEGKMVMEMFGKNLGVKVIHVDATDQFMGHLAGVTDPEAKRKIIGREFVE 60
           VFVDHGLLRLDEGKMVMEMF +NLGVKVIHVDAT QFMGHLAGVTDPEAKRKIIGREFVE
Sbjct: 253 VFVDHGLLRLDEGKMVMEMFAQNLGVKVIHVDATAQFMGHLAGVTDPEAKRKIIGREFVE 312

Query: 61  VFQAESGKLKNAKWLAQGTIYPDVIESAGKGKKGAHTIKSHHNVGGLPETLNLKLLEPLR 120
           VFQAES KL+NAKWLAQGTIYPDVIESAGKGK  AHTIKSHHNVGGLPETLNL+LLEPLR
Sbjct: 313 VFQAESAKLQNAKWLAQGTIYPDVIESAGKGKNAAHTIKSHHNVGGLPETLNLQLLEPLR 372

Query: 121 ELFKDEVRELGVALGLPHEMVYRHPFPGPGLGVRILGEVKKEFADLLRRADAIFIEELRN 180
           ELFKDEVR+LGVALGLPH MVYRHPFPGPGLGVRILGEVKKEFADLLRRADAIFIEELRN
Sbjct: 373 ELFKDEVRKLGVALGLPHAMVYRHPFPGPGLGVRILGEVKKEFADLLRRADAIFIEELRN 432

Query: 181 TKDADGQSWYEKTSQAFAVFLPVKSVGVMGDGRTYEYVVALRAVQTQDFMTAHWAHLPHE 240
           TKD   ++WY+KTSQAFAVFLPVKSVGVMGDGRTYEYVVALRAVQTQDFMTAHWAHLPHE
Sbjct: 433 TKDDQDETWYDKTSQAFAVFLPVKSVGVMGDGRTYEYVVALRAVQTQDFMTAHWAHLPHE 492

Query: 241 LLGHVSNRIINEVRGINRVVYDISGKPPATIEWE 274
           LLG VSNRIINEVRGINRVVYDISGKPPATIEWE
Sbjct: 493 LLGRVSNRIINEVRGINRVVYDISGKPPATIEWE 526


>ref|ZP_08274508.1| GMP synthase (glutamine-hydrolyzing) [Oxalobacteraceae bacterium
           IMCC9480]
 gb|EGF32023.1| GMP synthase (glutamine-hydrolyzing) [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 534

 Score =  503 bits (1294), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 252/283 (89%), Positives = 258/283 (91%), Gaps = 10/283 (3%)

Query: 1   VFVDHGLLRLDEGKMVMEMFGKNLGVKVIHVDATDQFMGHLAGVTDPEAKRKIIGREFVE 60
           VFVDHGLLRL+EG MVM+MF  NLGVKVI VDATDQFMGHLAGVTDPEAKRKIIGREFVE
Sbjct: 253 VFVDHGLLRLNEGDMVMDMFATNLGVKVIRVDATDQFMGHLAGVTDPEAKRKIIGREFVE 312

Query: 61  VFQAESGKLKNAKWLAQGTIYPDVIESAGKGKKGAHTIKSHHNVGGLPETLNLKLLEPLR 120
           VFQ ES KLKNAKWLAQGTIYPDVIESAGKGKKG HTIKSHHNVGGLPETLNLKLLEPLR
Sbjct: 313 VFQVESAKLKNAKWLAQGTIYPDVIESAGKGKKG-HTIKSHHNVGGLPETLNLKLLEPLR 371

Query: 121 ELFKDEVRELGVALGLPHEMVYRHPFPGPGLGVRILGEVKKEFADLLRRADAIFIEELRN 180
           ELFKDEVR LGVALGLP  MVYRHPFPGPGLGVRILGEVKKE+ADLLRRADAIFI+ELRN
Sbjct: 372 ELFKDEVRALGVALGLPATMVYRHPFPGPGLGVRILGEVKKEYADLLRRADAIFIDELRN 431

Query: 181 TK-------DADG--QSWYEKTSQAFAVFLPVKSVGVMGDGRTYEYVVALRAVQTQDFMT 231
                    D  G  ++WYE TSQAFAVFLPVKSVGVMGDGRTYEYVVALRAVQTQDFMT
Sbjct: 432 CTLDLPAGIDQQGIVKNWYEGTSQAFAVFLPVKSVGVMGDGRTYEYVVALRAVQTQDFMT 491

Query: 232 AHWAHLPHELLGHVSNRIINEVRGINRVVYDISGKPPATIEWE 274
           AHWAHLPHELLG VSNRIINEVRGINRVVYDISGKPPATIEWE
Sbjct: 492 AHWAHLPHELLGRVSNRIINEVRGINRVVYDISGKPPATIEWE 534


>ref|YP_001353722.1| GMP synthase [Janthinobacterium sp. Marseille]
 sp|A6SZM5.1|GUAA_JANMA RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gb|ABR88607.1| GMP synthase (glutamine-hydrolysing) [Janthinobacterium sp.
           Marseille]
          Length = 539

 Score =  501 bits (1290), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 250/287 (87%), Positives = 263/287 (91%), Gaps = 14/287 (4%)

Query: 1   VFVDHGLLRLDEGKMVMEMFGKNLGVKVIHVDATDQFMGHLAGVTDPEAKRKIIGREFVE 60
           VFVDHGLLRLDEGKMVMEMF ++LGV VIH+DA DQFMGHLAGV+DPEAKRKIIGREFVE
Sbjct: 254 VFVDHGLLRLDEGKMVMEMFAESLGVNVIHIDAVDQFMGHLAGVSDPEAKRKIIGREFVE 313

Query: 61  VFQAESGKLKNAKWLAQGTIYPDVIESAGKGKKGAHTIKSHHNVGGLPETLNLKLLEPLR 120
           VFQ E+GK KNAKWLAQGTIYPDVIESAGKGKKG HTIKSHHNVGGLPETLNL+LLEPLR
Sbjct: 314 VFQVEAGKRKNAKWLAQGTIYPDVIESAGKGKKG-HTIKSHHNVGGLPETLNLQLLEPLR 372

Query: 121 ELFKDEVRELGVALGLPHEMVYRHPFPGPGLGVRILGEVKKEFADLLRRADAIFIEELRN 180
           ELFKDEVR+LGVALGLPH+MVYRHPFPGPGLGVRILGEVKKEFADLLRRADAIFIEELR 
Sbjct: 373 ELFKDEVRKLGVALGLPHDMVYRHPFPGPGLGVRILGEVKKEFADLLRRADAIFIEELRK 432

Query: 181 T---------KDADG----QSWYEKTSQAFAVFLPVKSVGVMGDGRTYEYVVALRAVQTQ 227
           T         +  D     ++WY+ TSQAFAVFLPVKSVGVMGDGRTYEYVVALRAVQTQ
Sbjct: 433 TPFVATPGASEATDNGIPHRNWYDATSQAFAVFLPVKSVGVMGDGRTYEYVVALRAVQTQ 492

Query: 228 DFMTAHWAHLPHELLGHVSNRIINEVRGINRVVYDISGKPPATIEWE 274
           DFMTAHWAHLPHELLG+VSNRIINEVRGINRVVYDISGKPPATIEWE
Sbjct: 493 DFMTAHWAHLPHELLGNVSNRIINEVRGINRVVYDISGKPPATIEWE 539


>ref|YP_001797407.1| GMP synthase [Polynucleobacter necessarius subsp. necessarius
           STIR1]
 sp|B1XTW6.1|GUAA_POLNS RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gb|ACB43793.1| GMP synthase, large subunit [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 535

 Score =  501 bits (1290), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 246/275 (89%), Positives = 257/275 (93%), Gaps = 1/275 (0%)

Query: 1   VFVDHGLLRLDEGKMVMEMFGKNLGVKVIHVDATDQFMGHLAGVTDPEAKRKIIGREFVE 60
           VFVDHGLLRL+EG MVMEMF +NLGVKVI VDA + FMG LAGV+DPEAKRKIIG+EFVE
Sbjct: 261 VFVDHGLLRLNEGDMVMEMFARNLGVKVIRVDAKETFMGELAGVSDPEAKRKIIGKEFVE 320

Query: 61  VFQAESGKLKNAKWLAQGTIYPDVIESAGKGKKGAHTIKSHHNVGGLPETLNLKLLEPLR 120
           +FQAESGK+KNAKWLAQGTIYPDVIESAGKGKKGAHTIKSHHNVGGLPE ++LKLLEPLR
Sbjct: 321 IFQAESGKIKNAKWLAQGTIYPDVIESAGKGKKGAHTIKSHHNVGGLPEDMHLKLLEPLR 380

Query: 121 ELFKDEVRELGVALGLPHEMVYRHPFPGPGLGVRILGEVKKEFADLLRRADAIFIEELRN 180
           ELFKDEVRELGVALGLP EMVYRHPFPGPGLGVRILGEVK EFA LL+RADAIFIEELRN
Sbjct: 381 ELFKDEVRELGVALGLPREMVYRHPFPGPGLGVRILGEVKAEFASLLQRADAIFIEELRN 440

Query: 181 TKDADGQ-SWYEKTSQAFAVFLPVKSVGVMGDGRTYEYVVALRAVQTQDFMTAHWAHLPH 239
           T D   Q SWY+ TSQAFAVFLPVKSVGVMGDGRTYEYVVALRAVQTQDFMTAHWAHLPH
Sbjct: 441 TIDEVSQKSWYDLTSQAFAVFLPVKSVGVMGDGRTYEYVVALRAVQTQDFMTAHWAHLPH 500

Query: 240 ELLGHVSNRIINEVRGINRVVYDISGKPPATIEWE 274
           ELLG V NRIINEVRGINRVVYDISGKPPATIEWE
Sbjct: 501 ELLGKVFNRIINEVRGINRVVYDISGKPPATIEWE 535