BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0062.p (528 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_371823.1| TPR repeat-containing protein [Burkholderia sp.... 317 4e-84 ref|YP_003775608.1| TPR repeat containing protein [Herbaspirillu... 314 2e-83 ref|YP_004848605.1| hypothetical protein NH8B_3438 [Pseudogulben... 310 4e-82 ref|YP_378620.1| TPR repeat-containing protein [Chlorobium chlor... 298 1e-78 ref|YP_001895065.1| hypothetical protein Bphyt_1426 [Burkholderi... 298 2e-78 >ref|YP_371823.1| TPR repeat-containing protein [Burkholderia sp. 383] gb|ABB11179.1| TPR repeat protein [Burkholderia sp. 383] Length = 740 Score = 317 bits (812), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 200/494 (40%), Positives = 274/494 (55%), Gaps = 10/494 (2%) Query: 31 RPDEALDVIGQAIVLDPAFVPALMRRAYLLMAQERYAEAIVAYDDCLQRFPALEEAAQSR 90 RP EALD +AI DPA + L A L R EA+ + L P A SR Sbjct: 242 RPGEALDAFNEAIAADPARIDVLYNSAVALERLGRADEALARCERVLSFDPDHVRAHASR 301 Query: 91 HRAVILALDHCRIM------LEERPQDAGLLCGQAALLERLGRFDEALASLDRALGYAPT 144 A++ H + L P A LC + L L R+D+ALAS D AL Sbjct: 302 GNALLQLKRHDDALVAYARALALDPHSAETLCNRGTALRYLKRYDDALASYDAALARDAR 361 Query: 145 HQQALNQRGNVLLHLNRHEEAVLCYDRILAQSAVNAAAIFNRGNVLQKMNCINQALWCYE 204 +A R +VL L+R++EA+ DR LA +A NRGN+ + + AL Y+ Sbjct: 362 FAEAWTNRSSVLQDLHRYDEAMASLDRALALRPDHATNWLNRGNLHFETARTDDALASYD 421 Query: 205 QALTLQPNFPEAEMAQSHCLLLQGDFAGGWQHHEARWRTSQLRDQGLFPHEPAWLGEPSL 264 +A+ LQP++ EA A++ L++GDFA GW +E R R +QL +PAW G+ L Sbjct: 422 RAIALQPDYAEAHFARASLYLIEGDFARGWPEYEWRLRDAQLARHYRPFTQPAWQGDTPL 481 Query: 265 AGRSILLWAEQGLGDTIQFARYIPLVADLAAQVTVCVPESLRRLLASLTALPNVTLVSND 324 GR++L+ AEQG GDT+ F RY+PLVA A+V V LR L+ASL+ +V ++ Sbjct: 482 DGRTVLIHAEQGFGDTLHFCRYVPLVAARGARVVFEVQPQLRALMASLSGAAHV--IARG 539 Query: 325 KALTPHDFHCPLMSLPLALSWTLATIPAAVPYLHADIELKQQWSAVLGPASPRLRVGLAW 384 + L D PL+SLP A ATIP A YLHAD + +QW A+LG R R+G+AW Sbjct: 540 EPLPAFDCQAPLLSLPHAFRTDEATIPHAGAYLHADPQRTRQWDALLGERR-RPRIGIAW 598 Query: 385 AGRQYGERNHTRDIPLSHLRPLAEIEVELVSLQQQIPAGDLAELAQWARMHRLEAAMTDM 444 AG +H R I S L PL +++V+ +SLQ+ + D A LA A + R++ + D Sbjct: 599 AGNPEHRNDHNRSIDFSWLAPLFDLDVDWISLQKPVRERDEALLAG-APVRRVDDELGDF 657 Query: 445 AETAALIDNLDLVISADTAVIHLAGALGKPAWLLLRYESEWRWGWQTGSSRWYPTVKVFR 504 A+TAALI LDLVI+ D+AV HLAGALG W+LL +EWRW G S WYP+ ++FR Sbjct: 658 ADTAALIGALDLVIAVDSAVAHLAGALGHAVWVLLPDPAEWRWMRTRGDSPWYPSARLFR 717 Query: 505 QQHRGDWSGVVEEV 518 Q GDW+G ++ V Sbjct: 718 QAVPGDWTGAIDAV 731 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 68/200 (34%), Positives = 97/200 (48%), Gaps = 6/200 (3%) Query: 31 RPDEALDVIGQAIVLDPAFVPALMRRAYLLMAQERYAEAIVAYDDCLQRFPALEEAAQSR 90 R DEALD +A+++DP + R +L +R A+A+ ++ P + R Sbjct: 174 RFDEALDTYDRALMVDPRSFESWFNRGLVLRELQRPADALQCFERANAIRPGMAAIMAER 233 Query: 91 HRAVI------LALDHCRIMLEERPQDAGLLCGQAALLERLGRFDEALASLDRALGYAPT 144 R +I ALD + P +L A LERLGR DEALA +R L + P Sbjct: 234 GRTLIDLDRPGEALDAFNEAIAADPARIDVLYNSAVALERLGRADEALARCERVLSFDPD 293 Query: 145 HQQALNQRGNVLLHLNRHEEAVLCYDRILAQSAVNAAAIFNRGNVLQKMNCINQALWCYE 204 H +A RGN LL L RH++A++ Y R LA +A + NRG L+ + + AL Y+ Sbjct: 294 HVRAHASRGNALLQLKRHDDALVAYARALALDPHSAETLCNRGTALRYLKRYDDALASYD 353 Query: 205 QALTLQPNFPEAEMAQSHCL 224 AL F EA +S L Sbjct: 354 AALARDARFAEAWTNRSSVL 373 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 52/136 (38%), Positives = 70/136 (51%), Gaps = 1/136 (0%) Query: 97 ALDHCRIMLEERPQDAGLLCGQAALLERLGRFDEALASLDRALGYAPTHQQALNQRGNVL 156 AL+H L P D L + L L R DEALAS DRAL +P AL RG+ L Sbjct: 110 ALEHFAAALRATPDDVQTLVRRGNTLLGLRRPDEALASFDRALAVSPLVLDALCNRGSAL 169 Query: 157 LHLNRHEEAVLCYDRILAQSAVNAAAIFNRGNVLQKMNCINQALWCYEQALTLQPNFPEA 216 L+R +EA+ YDR L + + FNRG VL+++ AL C+E+A ++P A Sbjct: 170 RALSRFDEALDTYDRALMVDPRSFESWFNRGLVLRELQRPADALQCFERANAIRPGM-AA 228 Query: 217 EMAQSHCLLLQGDFAG 232 MA+ L+ D G Sbjct: 229 IMAERGRTLIDLDRPG 244 >ref|YP_003775608.1| TPR repeat containing protein [Herbaspirillum seropedicae SmR1] gb|ADJ63700.1| TPR repeat containing protein [Herbaspirillum seropedicae SmR1] Length = 528 Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 228/523 (43%), Positives = 306/523 (58%), Gaps = 24/523 (4%) Query: 9 DPGHLQQLMTLLTQSIAADLEGRPDEALDVIGQAIVLDPAFVPALMRRAYLLMAQERYAE 68 DP L +LM L+ +IA + + AL + QA+ LDP+F+P M+RA LL E Sbjct: 5 DPATLARLMGLMCDAIALRGAQQAEAALAALDQALALDPSFLPLYMQRADLLQEMGALPE 64 Query: 69 AIVAYDDCLQRFPALEEAAQSRHRAVILALDHCRIMLEERPQDAGLLCGQAALLE----- 123 AI A CL P +EA ++ HR++ L E + D G G AAL++ Sbjct: 65 AIAACAACLDLAPDYDEA-RALHRSL---LQRWATQCELQTADEGA-SGSAALIDLARAR 119 Query: 124 -RLGRFDEALASLDRAL--GYAPTHQQALNQRGNVLLHLNRHEEAVLCYDRILAQSAVNA 180 +L + ALA+++RAL G A AL+ ++LL LNRHEEA+ CY + A Sbjct: 120 LQLDQPLPALAAVERALASGQAGLALHALH--ADILLRLNRHEEALECYPPAADEDQARA 177 Query: 181 AAIFNRGNVLQKMNCINQALWCYEQALTLQPNFPEAEMAQSHCLLLQGDFAGGWQHHEAR 240 FN ++L++M I QA +EQAL P+FPEAE+ ++H LL Q +A GW+ HEAR Sbjct: 178 LHAFNMADILRRMGRIEQAQAAFEQALRWHPDFPEAEVGRAHMLLSQQHYAEGWRAHEAR 237 Query: 241 WRTSQLRDQGLFPHEPAWLGEPSLAGRSILLWAEQGLGDTIQFARYIPLVADLAAQVTVC 300 + ++L +G+ P W + G+ +LLWAEQG GDT+QFARYIPLVA AA+V++C Sbjct: 238 FGIAELARRGIDSPRPRWRAGEPVRGKRVLLWAEQGQGDTLQFARYIPLVAQQAAEVSLC 297 Query: 301 VPESLRRLLASLTALPNVTLVSNDKALTPHDFHCPLMSLPLALSWTLATIPAAVPYLHAD 360 P SL +LA LP V ++N HD H L+SLPL L PYL A Sbjct: 298 APASLLAVLAP--CLPQVRCMANPGEAPDHDLHASLLSLPLLLGLPDPRQGPPSPYLAAQ 355 Query: 361 IELKQQWSAVLG---PASPRL-RVGLAWAGRQYGERNHTRDIPLSHLRPLAEIEVELVSL 416 + QQW A L PA PR R+G+AWAGRQY +H+RDIPL L PL + + VSL Sbjct: 356 PQRVQQWQAYLSALWPAMPRRPRLGIAWAGRQYATVHHSRDIPLDALAPLWTLPADFVSL 415 Query: 417 QQQIPAGDLAELAQWA-RMHRLEAAMTDMAETAALIDNLDLVISADTAVIHLAGALGKPA 475 Q ++PAGD A A A R+H + D A+TAAL+ LDLVIS DTAV+HLAGALG P Sbjct: 416 QVEVPAGDQAAHATLAQRLH--TPTLVDWADTAALLCALDLVISVDTAVVHLAGALGVPC 473 Query: 476 WLLLRYESEWRWGWQTGSSRWYPTVKVFRQQHRGDWSGVVEEV 518 L LRY+ EWRWG + + WYP++++ RQ+ RG W VVEE+ Sbjct: 474 LLPLRYDGEWRWGVKGSQTPWYPSLQLLRQRERGQWGPVVEEM 516 >ref|YP_004848605.1| hypothetical protein NH8B_3438 [Pseudogulbenkiania sp. NH8B] dbj|BAK78191.1| TPR repeat-containing protein [Pseudogulbenkiania sp. NH8B] Length = 592 Score = 310 bits (794), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 182/494 (36%), Positives = 261/494 (52%), Gaps = 34/494 (6%) Query: 30 GRPDEALDVIGQAIVLDPAFVPALMRRAYLLMAQERYAEAIVAYDDCLQRFPALEEAAQS 89 GR EA++ AI L+P + A L + +AEA+ D ++ PA+ EA + Sbjct: 122 GRLHEAVEDFNHAITLNPTYADAYCNMGGALADSDAFAEALSMLDRAIELAPAMAEAHLN 181 Query: 90 RHRAVILALDHCRIMLEERPQDAGLLCGQAALLERLGRFDEALASLDRALGYAPTHQQAL 149 R A L L RF+EA+ S ++AL P + +AL Sbjct: 182 RGNA----------------------------LNGLRRFEEAVVSYEQALKLRPNYSEAL 213 Query: 150 NQRGNVLLHLNRHEEAVLCYDRILAQSAVNAAAIFNRGNVLQKMNCINQALWCYEQALTL 209 RG+ L+ LNR+E+A+ Y++ + A+A + L + I++AL CYE+A+ L Sbjct: 214 CNRGHSLVELNRYEDALHSYNQAIKLEKNYASAFNGKAKSLVGLKKIDEALVCYERAIEL 273 Query: 210 QPNFPEAEMAQSHCLLLQGDFAGGWQHHEARWRTSQLRDQGLFPHE---PAWLGEPSLAG 266 +P E ++ L+LQG++ GW+ +E+R R + ++ + P WLGE +L+G Sbjct: 274 KPEDALYEWGKALLLILQGNYEEGWRLYESRKRHKKFKENICRIQDFAQPLWLGEVNLSG 333 Query: 267 RSILLWAEQGLGDTIQFARYIPLVADLAAQVTVCVPESLRRLLASLTALPNVTLVSNDKA 326 ++ILL EQGLGDT+Q RY+PL+A V V VP SL ++ AS A P +V+ Sbjct: 334 KTILLHHEQGLGDTLQMLRYVPLLAKFGGDVVVQVPASLVQIAAS--ADPAARIVAKGNP 391 Query: 327 LTPHDFHCPLMSLPLALSWTLATIPAAVPYLHADIELKQQWSAVLGPASPRLRVGLAWAG 386 L D C MSLP TL T+P+AVPYL A KQ W LG S + R+GL W+G Sbjct: 392 LPEFDLQCSFMSLPGMFRTTLDTVPSAVPYLQASKSSKQYWHQKLGDKS-KYRIGLVWSG 450 Query: 387 RQYGERNHTRDIPLSHLRPLAEIEVELVSLQQQIPAGDLAELAQWARMHRLEAAMTDMAE 446 +H R IPL L PL +I+ E SLQ + D L Q ++ + + Sbjct: 451 SAQHRNDHNRSIPLMALLPLLDIDAEFFSLQNEYREADGEVLRQKGQIQDHAKELGTFND 510 Query: 447 TAALIDNLDLVISADTAVIHLAGALGKPAWLLLRYESEWRWGWQTGSSRWYPTVKVFRQQ 506 TA I+ LDL+IS DTA+ HLAGALGKP WLLL Y ++RWG + S WYP+ ++FRQ Sbjct: 511 TAGFIEQLDLIISVDTAIAHLAGALGKPVWLLLPYSPDYRWGLEQSESAWYPSARLFRQP 570 Query: 507 HRGDWSGVVEEVAE 520 DW VV+ VA Sbjct: 571 RAEDWESVVQTVAN 584 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 79/191 (41%), Gaps = 28/191 (14%) Query: 35 ALDVIGQAIVLDPAFVPALMRRAYLLMAQERYAEAIVAYDDCLQRFPALEEAAQSRHRAV 94 AL+ +A+ +D +F+ A + + +L Y A+ YD L P E+ +R A Sbjct: 59 ALECFDRAVEVDSSFIDAYINKGVVLKKMAFYDAAVACYDRALVINPRSAESYNNRGSAY 118 Query: 95 ILALDHCRIMLEERPQDAGLLCGQAALLERLGRFDEALASLDRALGYAPTHQQALNQRGN 154 + LGR EA+ + A+ PT+ A G Sbjct: 119 L----------------------------GLGRLHEAVEDFNHAITLNPTYADAYCNMGG 150 Query: 155 VLLHLNRHEEAVLCYDRILAQSAVNAAAIFNRGNVLQKMNCINQALWCYEQALTLQPNFP 214 L + EA+ DR + + A A NRGN L + +A+ YEQAL L+PN+ Sbjct: 151 ALADSDAFAEALSMLDRAIELAPAMAEAHLNRGNALNGLRRFEEAVVSYEQALKLRPNYS 210 Query: 215 EAEMAQSHCLL 225 EA + H L+ Sbjct: 211 EALCNRGHSLV 221 >ref|YP_378620.1| TPR repeat-containing protein [Chlorobium chlorochromatii CaD3] gb|ABB27577.1| TPR repeat [Chlorobium chlorochromatii CaD3] Length = 1827 Score = 298 bits (764), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 172/496 (34%), Positives = 264/496 (53%), Gaps = 9/496 (1%) Query: 34 EALDVIGQAIVLDPAFVPALMRRAYLLMAQERYAEAIVAYDDCLQRFPALEEAAQSRH-- 91 ++L+++ QAI + F A R +L ++ +AI ++ +++ P A SR Sbjct: 1327 QSLELLNQAIAIKSDFASAYFNRGLVLKNLSQFEKAIEDFNKAIEQKPEYASAYHSRGTV 1386 Query: 92 ----RAVILALDHCRIMLEERPQDAGLLCGQAALLERLGRFDEALASLDRALGYAPTHQQ 147 + AL + +P C + L+ L RF+EA+ S ++A+ P + + Sbjct: 1387 QKELKQFDAALKSYEKAIALKPDYTEAYCNRGNALQLLKRFNEAIDSYNKAIALKPQYAE 1446 Query: 148 ALNQRGNVLLHLNRHEEAVLCYDRILAQSAVNAAAIFNRGNVLQKMNCINQALWCYEQAL 207 A + RG V L + ++ +++ + A A A NRG V +++ ++ AL + +A+ Sbjct: 1447 AYSNRGVVFRELKELDTSLDNFNKAIELKADYAEAYSNRGVVFRELKMLDNALADFNKAI 1506 Query: 208 TLQPNFPEAEMAQSHCLLLQGDFAGGWQHHEARWRTSQLRDQGLFPHEPAWLGEPSLAGR 267 L+ ++ A +S LLL G+FA GWQ +E RW+ + +P WLGE S+A + Sbjct: 1507 ELKKDYAIAYWNKSLVLLLLGNFAEGWQCYEWRWKKADFTSPKRNFTQPLWLGEESIADK 1566 Query: 268 SILLWAEQGLGDTIQFARYIPLVADLAAQVTVCVPESLRRLLASLTALPNVTLVSNDKAL 327 +ILL +EQGLGDTIQF RY PLVA+L A+V + +P SL LL L + V + K L Sbjct: 1567 TILLHSEQGLGDTIQFCRYAPLVAELGARVVLEIPSSLALLLQPLDGVAEV--IVKGKTL 1624 Query: 328 TPHDFHCPLMSLPLALSWTLATIPAAVPYLHADIELKQQWSAVLGPASPRLRVGLAWAGR 387 P D+HCPL+SLPLA TL TIP YL +QW +G + + R+GL W+G Sbjct: 1625 PPFDYHCPLLSLPLAFKTTLETIPFPTKYLSLPSHKIKQWQQRIGNIA-KPRIGLVWSGS 1683 Query: 388 QYGERNHTRDIPLSHLRPLAEIEVELVSLQQQIPAGDLAELAQWARMHRLEAAMTDMAET 447 + +H R I LS L +SLQ+++ D A L A M + D +T Sbjct: 1684 TKHKNDHNRSIELSKLLEYLPDHYHYISLQKELRESDKATLEATANMVHFGDELHDFTDT 1743 Query: 448 AALIDNLDLVISADTAVIHLAGALGKPAWLLLRYESEWRWGWQTGSSRWYPTVKVFRQQH 507 AAL + ++LVIS DT+V HLA ALGKP W+LL + +WRW + WY + ++RQ Sbjct: 1744 AALCELVELVISVDTSVAHLAAALGKPTWILLPFIPDWRWLLDRNDTPWYASATLYRQHT 1803 Query: 508 RGDWSGVVEEVAECLR 523 R DW+ +E + E LR Sbjct: 1804 RDDWTAALERLHEDLR 1819 Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 163/489 (33%), Positives = 255/489 (52%), Gaps = 31/489 (6%) Query: 34 EALDVIGQAIVLDPAFVPALMRRAYLLMAQERYAEAIVAYDDCLQRFPALEEAAQSRHRA 93 +ALD++ QAI L P F A R +L +R+ EA+ +Y+ L Sbjct: 334 KALDLLNQAIALKPTFTEAYSNRGAVLKELKRFDEALASYNKAL---------------- 377 Query: 94 VILALDHCRIMLEERPQDAGLLCGQAALLERLGRFDEALASLDRALGYAPTHQQALNQRG 153 E + A +A LL+ +F EA+ S ++A+ + P + +A + RG Sbjct: 378 ------------ELKENYAAAWYNRANLLKEWKQFSEAIESYNKAIEFQPNYPEAYSNRG 425 Query: 154 NVLLHLNRHEEAVLCYDRILAQSAVNAAAIFNRGNVLQKMNCINQALWCYEQALTLQPNF 213 VL L + + A Y++ +A A N+G VL+++ ++ A+ + +A+ L+P++ Sbjct: 426 VVLKELKQFDAAFASYNQAIALKPTYVEAYSNKGTVLKELKQLDAAIESFNKAIALKPDY 485 Query: 214 PEAEMAQSHCLLLQGDFAGGWQHHEARWRTSQLRDQGLFPHEPAWLGEPSLAGRSILLWA 273 E + +S LLL G+F GW +E RW+ + +P WLG+ SL ++ILL + Sbjct: 486 AEVQWNKSLVLLLSGNFIDGWMLYEWRWKKADFTSPKRNFTQPLWLGKESLEHKTILLHS 545 Query: 274 EQGLGDTIQFARYIPLVADLAAQVTVCVPESLRRLLASLTALPNVTLVSNDKALTPHDFH 333 EQGLGDT+QF RY LVA A+V + VP+ L LL L + + ++ K + P D+H Sbjct: 546 EQGLGDTLQFCRYATLVAKRGARVILEVPDILIPLLKQLEGVEQI--IAKGKKIPPFDYH 603 Query: 334 CPLMSLPLALSWTLATIPAAVPYLHADIELKQQWSAVLGPASPRLRVGLAWAGRQYGERN 393 PL+SLPLA + L IP+ YL D ++W L P R+GL W+GR + + Sbjct: 604 TPLLSLPLAFTTRLENIPSPSKYLFIDNNKIEEWKQRLHTI-PHPRIGLVWSGRAEHKND 662 Query: 394 HTRDIPLSHLRPLAEIEVELVSLQQQIPAGDLAELAQWARMHRLEAAMTDMAETAALIDN 453 H R I L+ L + VSLQ+++ D L + M + D A+TAAL + Sbjct: 663 HNRSIALADLLRYLPNKYHYVSLQKEVRDSDKKTLDVTSNMVHFGNELHDFADTAALCEL 722 Query: 454 LDLVISADTAVIHLAGALGKPAWLLLRYESEWRWGWQTGSSRWYPTVKVFRQQHRGDWSG 513 +DLVIS DT+V HL+ +LGKP W+LL + +WRW + WY + ++RQ R DW Sbjct: 723 MDLVISVDTSVAHLSASLGKPTWILLPFIPDWRWLLDRNDTPWYASATLYRQHTRDDWES 782 Query: 514 VVEEVAECL 522 V++ +A L Sbjct: 783 VLKNIATDL 791 Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 155/421 (36%), Positives = 228/421 (54%), Gaps = 5/421 (1%) Query: 103 IMLEERPQDAGLLCGQAALLERLGRFDEALASLDRALGYAPTHQQALNQRGNVLLHLNRH 162 I L+ DA L G A + +++EAL L++A+ A RG V +L Sbjct: 838 IQLQPNHVDALHLLGVVAFQKE--QYNEALNLLNQAIALNTDFASAYFNRGLVFKNLYHF 895 Query: 163 EEAVLCYDRILAQSAVNAAAIFNRGNVLQKMNCINQALWCYEQALTLQPNFPEAEMAQSH 222 ++A+ +DR L A A RGN+L+++ I AL Y AL L+ ++ + ++ Sbjct: 896 DKALEDFDRALRLKPNYAEAYHKRGNILKELGLITAALSSYNNALALKADYAGVYLDKAI 955 Query: 223 CLLLQGDFAGGWQHHEARWRTSQLRDQGLFPHEPAWLGEPSLAGRSILLWAEQGLGDTIQ 282 LLL G+FA GW +E RW+ L +P WLG+ + ++ILL +EQGLGDTIQ Sbjct: 956 ILLLLGNFADGWDIYEWRWKCKDLPLVQRNFTQPLWLGQKDIQSKTILLHSEQGLGDTIQ 1015 Query: 283 FARYIPLVADLAAQVTVCVPESLRRLLASLTALPNVTLVSNDKALTPHDFHCPLMSLPLA 342 F RY LVA+ A V + VP SL L+ SL + + V K L P D HCPL+SLPLA Sbjct: 1016 FCRYTQLVAERGALVILEVPASLASLMQSLEGVTEI--VVKGKKLPPFDCHCPLLSLPLA 1073 Query: 343 LSWTLATIPAAVPYLHADIELKQQWSAVLGPASPRLRVGLAWAGRQYGERNHTRDIPLSH 402 + TL IP+ YL ++ + + +W L A P+ R+GL W+G + + R I LS Sbjct: 1074 CNTTLENIPSPSKYLSSNTKKRNKWKDRLQ-AIPQPRIGLVWSGSTQHKNDRNRSIELSE 1132 Query: 403 LRPLAEIEVELVSLQQQIPAGDLAELAQWARMHRLEAAMTDMAETAALIDNLDLVISADT 462 L +SLQ+++ D A + + + A+ D A+TAAL + +D+VIS DT Sbjct: 1133 LLQYLPDAYHYISLQKELRESDKATVEATSNIVHFGDALHDFADTAALCELVDIVISVDT 1192 Query: 463 AVIHLAGALGKPAWLLLRYESEWRWGWQTGSSRWYPTVKVFRQQHRGDWSGVVEEVAECL 522 +V HL+ ALGKP W+LL Y +WRW + WY + ++RQ HR DW V + + E L Sbjct: 1193 SVAHLSAALGKPTWILLPYIPDWRWLLDRNDTPWYASATLYRQAHRDDWLSVFKRLQEDL 1252 Query: 523 R 523 + Sbjct: 1253 Q 1253 >ref|YP_001895065.1| hypothetical protein Bphyt_1426 [Burkholderia phytofirmans PsJN] gb|ACD15841.1| TPR repeat-containing protein [Burkholderia phytofirmans PsJN] Length = 574 Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 196/515 (38%), Positives = 266/515 (51%), Gaps = 22/515 (4%) Query: 31 RPDEALDVIGQAIVLDPAFVPALMRRAYLLMAQERYAEAIVAYDDCLQRFPALEEAAQSR 90 R E ++++G+A+ ++ P AY L +R+ EA+ + D L P +A +R Sbjct: 60 RLQEGVELLGKALAINAKQAPLHSNLAYALNVLQRFDEALASADRALALQPKFPDALNNR 119 Query: 91 HRA------VILALDHCRIMLEERPQDAGLLCGQAALLERLGRFDEALASLDRALGYAPT 144 A + AL + P A +A +L LGR +ALAS D AL P Sbjct: 120 GNAQAGLNRPLDALGSFDRAIALNPDFAQAWNNRACVLRDLGRPADALASCDHALALQPG 179 Query: 145 HQQALNQRGNVLLHLNRHEEAVLCYDRILAQSAVNAAAIFNRGNVLQKMNCINQALWCYE 204 + A + RGN LN+ EEA CY R L + A A N G +N QAL YE Sbjct: 180 YPDAWSNRGNAFSDLNQPEEAERCYRRALELAPAFADAWNNLGLTQIDLNQHAQALVSYE 239 Query: 205 QALTLQPNFPEAEMAQSHCLLLQGDFAGGWQHHEARWRTSQLRDQGLFPHEPAWLGEPSL 264 +AL + + E +S CLL GWQ +E RW S+++ EP WLG+ S+ Sbjct: 240 RALAVNSDAAETHWNESLCLLQMRQLEAGWQKYEWRWERSRIKASRRSFAEPLWLGDFSI 299 Query: 265 AGRSILLWAEQGLGDTIQFARYIPLVADLAAQVTVCVPESLRRLLASLTALPNVTLVSND 324 G++ILL AEQGLGDT+QF RY LV+ L A+V + VP L RL+A+L + L+ Sbjct: 300 DGKTILLHAEQGLGDTLQFCRYAALVSKLGAKVVLEVPRELMRLMATLDGVDQ--LIEAG 357 Query: 325 KALTPHDFHCPLMSLPLALSWTLATIPAAVPYLHADIELKQQWSAVL-GPASPRLRVGLA 383 + L D HCPL+SLPLA L +IP+ PYL AD E +QW L PA RL+VGL Sbjct: 358 QTLPSFDCHCPLLSLPLAFKTGLDSIPSNTPYLCADAEAARQWRERLHAPADARLKVGLV 417 Query: 384 WAGRQYGERNHT---------RDIPLSHLRPLAEI-EVELVSLQQQIPAGDLAELAQWAR 433 WAG G R H R I + L PL ++ V SLQ+ A L + R Sbjct: 418 WAG---GNRPHVAELRKNDARRSIAFARLAPLLDVPNVRFFSLQKGPAAQQLESDERGGR 474 Query: 434 MHRLEAAMTDMAETAALIDNLDLVISADTAVIHLAGALGKPAWLLLRYESEWRWGWQTGS 493 + + D A+TAAL+ NLDLVIS DT+ HLAGAL KP W+L R+++ WRW + Sbjct: 475 VIDYTGELDDFADTAALVANLDLVISVDTSTAHLAGALDKPVWILNRFDTCWRWMLERTD 534 Query: 494 SRWYPTVKVFRQQHRGDWSGVVEEVAECLRLAAGG 528 + WYP ++FRQ GDW V+ + L A G Sbjct: 535 TPWYPRARLFRQPALGDWDSVMMAARDALNALAAG 569