BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0043.p         (123 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004752008.1| putative stomatin/prohibitin-family membrane...   204   3e-51
ref|YP_001353729.1| membrane protease subunit [Janthinobacterium...   192   1e-47
ref|YP_001099654.1| hypothetical protein HEAR1354 [Herminiimonas...   188   2e-46
ref|YP_003775604.1| membrane protease stomatin/prohibitin protei...   176   1e-42
ref|ZP_08275480.1| Putative stomatin/prohibitin-family membrane ...   175   2e-42

>ref|YP_004752008.1| putative stomatin/prohibitin-family membrane protease subunit YbbK
           [Collimonas fungivorans Ter331]
 gb|AEK61185.1| Putative stomatin/prohibitin-family membrane protease subunit YbbK
           [Collimonas fungivorans Ter331]
          Length = 305

 Score =  204 bits (520), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 107/122 (87%), Positives = 115/122 (94%)

Query: 2   KSALIAASEGRKQEQINIATGEREASIAKSEGEKQASINRAEGQAAAIIAIANASAEALR 61
           K ALIAASEGRKQEQINIATGEREASIAKSEGEKQASINRA+GQAAAI++IA ASAEA+R
Sbjct: 183 KRALIAASEGRKQEQINIATGEREASIAKSEGEKQASINRAQGQAAAILSIAEASAEAIR 242

Query: 62  KTAAAIQSPGGEEAVNLKVAEQYVAAFSQLAKTNNSIIVPANLSDMSTLIASALQVVKAQ 121
           KTAAAIQSPGG +AVNLKVAEQYVAAF QLAKTNNSIIVPANL D+S LIA+ALQVVK+Q
Sbjct: 243 KTAAAIQSPGGSDAVNLKVAEQYVAAFGQLAKTNNSIIVPANLGDISGLIATALQVVKSQ 302

Query: 122 GK 123
            K
Sbjct: 303 TK 304


>ref|YP_001353729.1| membrane protease subunit [Janthinobacterium sp. Marseille]
 gb|ABR89973.1| Membrane protease subunit [Janthinobacterium sp. Marseille]
          Length = 310

 Score =  192 bits (489), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 96/121 (79%), Positives = 113/121 (93%)

Query: 2   KSALIAASEGRKQEQINIATGEREASIAKSEGEKQASINRAEGQAAAIIAIANASAEALR 61
           K ALIAASEGRKQEQINIATGEREASIA+SEGEKQA+INRA+G+A+AI++IA A+AEA+R
Sbjct: 185 KRALIAASEGRKQEQINIATGEREASIARSEGEKQAAINRAQGEASAILSIAEATAEAIR 244

Query: 62  KTAAAIQSPGGEEAVNLKVAEQYVAAFSQLAKTNNSIIVPANLSDMSTLIASALQVVKAQ 121
           KTA+AI+ PGG +AVNLKVAEQYV AF +LAKTNNSII+PANL DMS LIA+A+QVVK+Q
Sbjct: 245 KTASAIREPGGSDAVNLKVAEQYVEAFGKLAKTNNSIIIPANLGDMSGLIATAMQVVKSQ 304

Query: 122 G 122
           G
Sbjct: 305 G 305


>ref|YP_001099654.1| hypothetical protein HEAR1354 [Herminiimonas arsenicoxydans]
 emb|CAL61527.1| putative membrane protein [Herminiimonas arsenicoxydans]
          Length = 311

 Score =  188 bits (478), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 94/121 (77%), Positives = 111/121 (91%)

Query: 2   KSALIAASEGRKQEQINIATGEREASIAKSEGEKQASINRAEGQAAAIIAIANASAEALR 61
           K ALIAASEGRKQEQINIA GEREASIA+SEGEKQA+INRA+G+A+AI++IA A+AEA+R
Sbjct: 186 KRALIAASEGRKQEQINIANGEREASIARSEGEKQAAINRAQGEASAILSIAEATAEAIR 245

Query: 62  KTAAAIQSPGGEEAVNLKVAEQYVAAFSQLAKTNNSIIVPANLSDMSTLIASALQVVKAQ 121
           KTA+AI+ PGG +AVNLKVAEQYV AF +LAKTNNSII+PANL DM  LIA+A+QVVK+Q
Sbjct: 246 KTASAIREPGGSDAVNLKVAEQYVEAFGKLAKTNNSIIIPANLGDMGGLIATAMQVVKSQ 305

Query: 122 G 122
           G
Sbjct: 306 G 306


>ref|YP_003775604.1| membrane protease stomatin/prohibitin protein [Herbaspirillum
           seropedicae SmR1]
 gb|ADJ63696.1| membrane protease stomatin/prohibitin protein [Herbaspirillum
           seropedicae SmR1]
          Length = 303

 Score =  176 bits (446), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 105/120 (87%), Positives = 112/120 (93%)

Query: 2   KSALIAASEGRKQEQINIATGEREASIAKSEGEKQASINRAEGQAAAIIAIANASAEALR 61
           K ALIAASEGRKQEQINIATGEREA+IA+SEGEKQASIN AEGQAAAI+AIA ASAEA+R
Sbjct: 183 KRALIAASEGRKQEQINIATGEREAAIARSEGEKQASINGAEGQAAAILAIAEASAEAIR 242

Query: 62  KTAAAIQSPGGEEAVNLKVAEQYVAAFSQLAKTNNSIIVPANLSDMSTLIASALQVVKAQ 121
           KTAAAIQ PGGE+AVNLKVAEQYV AF +LAKTNNSIIVPANLSDMS LIASALQV+K Q
Sbjct: 243 KTAAAIQQPGGEDAVNLKVAEQYVDAFGKLAKTNNSIIVPANLSDMSGLIASALQVIKQQ 302


>ref|ZP_08275480.1| Putative stomatin/prohibitin-family membrane protease subunit YbbK
           [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF31053.1| Putative stomatin/prohibitin-family membrane protease subunit YbbK
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 308

 Score =  175 bits (444), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 97/122 (79%), Positives = 112/122 (91%)

Query: 2   KSALIAASEGRKQEQINIATGEREASIAKSEGEKQASINRAEGQAAAIIAIANASAEALR 61
           K ALIAASEGR+QEQINIA GEREA IA+SEG++QASINRA+GQAAAI+A+A A+A+ALR
Sbjct: 186 KRALIAASEGRRQEQINIANGEREAQIARSEGDQQASINRAQGQAAAIVALAEANADALR 245

Query: 62  KTAAAIQSPGGEEAVNLKVAEQYVAAFSQLAKTNNSIIVPANLSDMSTLIASALQVVKAQ 121
           KT++AI  PGG +AVNLKVAEQYVAAFSQLAKTNNSIIVPANLSD+S LIA A+QVVK+Q
Sbjct: 246 KTSSAILEPGGSDAVNLKVAEQYVAAFSQLAKTNNSIIVPANLSDISGLIAGAMQVVKSQ 305

Query: 122 GK 123
            K
Sbjct: 306 QK 307