BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0015.p (453 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004752859.1| putative transporter protein [Collimonas fun... 677 0.0 ref|YP_003775872.1| major facilitator superfamily permease [Herb... 650 0.0 ref|ZP_08274762.1| putative transporter protein [Oxalobacteracea... 641 0.0 ref|YP_004156984.1| general substrate transporter [Variovorax pa... 639 0.0 ref|YP_001354331.1| major facilitator transporter [Janthinobacte... 637 0.0 >ref|YP_004752859.1| putative transporter protein [Collimonas fungivorans Ter331] gb|AEK62036.1| putative transporter protein [Collimonas fungivorans Ter331] Length = 448 Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust. Identities = 355/452 (78%), Positives = 411/452 (90%), Gaps = 5/452 (1%) Query: 2 IMASTHIHHPEVPGKFSANTPVGGSDNVNNAKSDHPVIAPGDIAIGVVIGRASEYFDFFV 61 +M STH + EV FS+++ + ++ NAK D IAPG+IAIGVVIGRASEYFDFFV Sbjct: 1 MMTSTHSRNGEVSADFSSHSTI---NDAQNAKPDS--IAPGEIAIGVVIGRASEYFDFFV 55 Query: 62 YAIASVLVFPTIFFPFEQRLEGTLYSFTIFAFAFLARPFGTILFMAIQRKLGREVKLTLA 121 YA+ASVLVFP++FFPFEQ+LEGTLY+F IF+FAFLARPFGT+LFMAIQR+LGREVKLT A Sbjct: 56 YAMASVLVFPSVFFPFEQQLEGTLYAFVIFSFAFLARPFGTVLFMAIQRRLGREVKLTAA 115 Query: 122 LFLLGLSTAGIAFLPTYEHLGFTAIVLLSVLRIGQGLALGGSWDGLPSLLALNVPKNKRG 181 LF+LG+STAGIAFLPTY+HLGF AIVLL++LRIGQG+ALGGSWDGLPSLLALN P+N+RG Sbjct: 116 LFILGISTAGIAFLPTYQHLGFYAIVLLALLRIGQGIALGGSWDGLPSLLALNAPQNRRG 175 Query: 182 WYAMLGQLGAPVGFIVAGLVFAYLIGNLSSDDFLEWGWRYPFYVAFAINVVALFARLRLV 241 WYAMLGQLGAPVGF++AG +FAY++ NL+++DFL+WGWRYPFYVAFAINVVALFARLRLV Sbjct: 176 WYAMLGQLGAPVGFMIAGGLFAYMLSNLTTEDFLDWGWRYPFYVAFAINVVALFARLRLV 235 Query: 242 ASDEYAQLLKERELEPTGVVDITRTQGRNLIIGALAALASYALFHLVSVFPLSWISLYSM 301 ++ EYA+LL ERELEPT +++TR+QGRN+IIGALAALASYALFHLV+VFPLSWI+LYSM Sbjct: 236 STPEYARLLDERELEPTNALEMTRSQGRNVIIGALAALASYALFHLVTVFPLSWITLYSM 295 Query: 302 RSMSDFLMVQVFGAVLMMVGIVLSGPIADRFGRRTTLGALAVLIAVLSGFVPTLINGGDT 361 RS+SDFL++QV GA LM +G+V SG IADR GRRTTLGA AVLIAVLS FVP L+NGG+ Sbjct: 296 RSVSDFLIIQVIGAGLMALGVVASGLIADRLGRRTTLGACAVLIAVLSAFVPALMNGGEF 355 Query: 362 GQDIFILVGFALLGLSYGQAAGAVTANFPAKYRYTGAALTSDLAWLVGAGFAPLVALGLS 421 GQ+ FIL+GF LLGLSYGQAAGAVTANFPAKYRYTGAALTSDL+WLVGAGFAPLVALGLS Sbjct: 356 GQNTFILLGFILLGLSYGQAAGAVTANFPAKYRYTGAALTSDLSWLVGAGFAPLVALGLS 415 Query: 422 AHFGLAYVSIYLLSGAVCSLAALSVNRALDIR 453 AHFGLAYVS YLLSGA CSLAALS+NRAL+IR Sbjct: 416 AHFGLAYVSFYLLSGAACSLAALSLNRALEIR 447 >ref|YP_003775872.1| major facilitator superfamily permease [Herbaspirillum seropedicae SmR1] gb|ADJ63964.1| permease of the major facilitator superfamily protein [Herbaspirillum seropedicae SmR1] Length = 447 Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust. Identities = 333/451 (73%), Positives = 392/451 (86%), Gaps = 6/451 (1%) Query: 3 MASTHIHHPEVPGKFSANTPVGGSDNVNNAKSDHPVIAPGDIAIGVVIGRASEYFDFFVY 62 MAST IH+ + G+ +G + DH I PG+IA+GVVIGRASEYFDFFVY Sbjct: 1 MASTSIHNGQGSGE------LGPHSTHPSTSHDHGKIEPGEIAVGVVIGRASEYFDFFVY 54 Query: 63 AIASVLVFPTIFFPFEQRLEGTLYSFTIFAFAFLARPFGTILFMAIQRKLGREVKLTLAL 122 A+ASVLVFP +FFP E +LEGTLY+F IFAFAFLARP GT +FMAIQ+ GREVKLTLAL Sbjct: 55 ALASVLVFPAVFFPNEPKLEGTLYAFVIFAFAFLARPIGTTIFMAIQKHYGREVKLTLAL 114 Query: 123 FLLGLSTAGIAFLPTYEHLGFTAIVLLSVLRIGQGLALGGSWDGLPSLLALNVPKNKRGW 182 F+LG STAGIA LPT+EH+G AI+LLS+LR+GQGLALGG+WDGLPSLLA+N P++KRGW Sbjct: 115 FMLGFSTAGIALLPTFEHIGVWAIILLSLLRVGQGLALGGAWDGLPSLLAMNAPQHKRGW 174 Query: 183 YAMLGQLGAPVGFIVAGLVFAYLIGNLSSDDFLEWGWRYPFYVAFAINVVALFARLRLVA 242 YA LGQLGAP+GF+VA +FAY++ +L++ DFLEWGWRYPFYVAFAINVVALF+RLRLV+ Sbjct: 175 YAALGQLGAPLGFVVAASLFAYMLSSLTTADFLEWGWRYPFYVAFAINVVALFSRLRLVS 234 Query: 243 SDEYAQLLKERELEPTGVVDITRTQGRNLIIGALAALASYALFHLVSVFPLSWISLYSMR 302 + EYA+LL ERELEP GVV++ TQGRN+IIGALAALASYALFHLV+VFPLSWI LYS+R Sbjct: 235 APEYAKLLDERELEPAGVVELATTQGRNIIIGALAALASYALFHLVTVFPLSWIKLYSLR 294 Query: 303 SMSDFLMVQVFGAVLMMVGIVLSGPIADRFGRRTTLGALAVLIAVLSGFVPTLINGGDTG 362 +DFL+VQ++G ++M VGIV+SG IADRFGRR TLG++A+LIA+LS FVPTL+NGG+ G Sbjct: 295 EATDFLVVQIWGGLIMAVGIVISGLIADRFGRRNTLGSMALLIAILSAFVPTLMNGGEAG 354 Query: 363 QDIFILVGFALLGLSYGQAAGAVTANFPAKYRYTGAALTSDLAWLVGAGFAPLVALGLSA 422 Q+ FIL+GFALLGLSYGQAAGAVTANF A+YRYTGAALTSDLAWLVGAGFAPLVALGLSA Sbjct: 355 QNTFILIGFALLGLSYGQAAGAVTANFKARYRYTGAALTSDLAWLVGAGFAPLVALGLSA 414 Query: 423 HFGLAYVSIYLLSGAVCSLAALSVNRALDIR 453 HFG+AYVS YLLSGAV SLAALS+NRAL+ R Sbjct: 415 HFGMAYVSFYLLSGAVGSLAALSLNRALEAR 445 >ref|ZP_08274762.1| putative transporter protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF31769.1| putative transporter protein [Oxalobacteraceae bacterium IMCC9480] Length = 449 Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/447 (72%), Positives = 388/447 (86%) Query: 7 HIHHPEVPGKFSANTPVGGSDNVNNAKSDHPVIAPGDIAIGVVIGRASEYFDFFVYAIAS 66 HI + G A + ++A DH VI P +IA+GV+IGRASEYFDFFVYA+AS Sbjct: 2 HIQQGQHTGTAGAAQTHSSVRDRHHANHDHSVIKPAEIAVGVIIGRASEYFDFFVYAMAS 61 Query: 67 VLVFPTIFFPFEQRLEGTLYSFTIFAFAFLARPFGTILFMAIQRKLGREVKLTLALFLLG 126 VLVFP++FFPF L+G LY+F IF+FAFLARP GT+LFM IQR+ GREVKLTLALF+LG Sbjct: 62 VLVFPSVFFPFASPLDGALYAFMIFSFAFLARPLGTVLFMEIQRRFGREVKLTLALFILG 121 Query: 127 LSTAGIAFLPTYEHLGFTAIVLLSVLRIGQGLALGGSWDGLPSLLALNVPKNKRGWYAML 186 +STAGIAFLP Y LG +IV+LS+LRIGQG+A+GGSWDGLPSLLALN P +RGWYAML Sbjct: 122 ISTAGIAFLPGYASLGSASIVVLSLLRIGQGIAIGGSWDGLPSLLALNAPPERRGWYAML 181 Query: 187 GQLGAPVGFIVAGLVFAYLIGNLSSDDFLEWGWRYPFYVAFAINVVALFARLRLVASDEY 246 GQLGAP+GF+VAG +FAYL+ NL+S +F++WGWR+PFY AFAINVVALFARLRLV+++EY Sbjct: 182 GQLGAPIGFMVAGGLFAYLLTNLTSAEFMDWGWRFPFYAAFAINVVALFARLRLVSTNEY 241 Query: 247 AQLLKERELEPTGVVDITRTQGRNLIIGALAALASYALFHLVSVFPLSWISLYSMRSMSD 306 A LL+ERELEPTGVV++TR+QGRN++IGALAALASYALFHLV+VFPLSWISL+S+R +S+ Sbjct: 242 ANLLEERELEPTGVVELTRSQGRNIVIGALAALASYALFHLVTVFPLSWISLHSIRPVSE 301 Query: 307 FLMVQVFGAVLMMVGIVLSGPIADRFGRRTTLGALAVLIAVLSGFVPTLINGGDTGQDIF 366 FL +Q+ GA LM +G+V+SG IADR GRRTTLGA AVLIA+LS FVP L+NGG G++IF Sbjct: 302 FLEIQILGAALMALGVVVSGLIADRVGRRTTLGACAVLIAILSAFVPMLMNGGVMGENIF 361 Query: 367 ILVGFALLGLSYGQAAGAVTANFPAKYRYTGAALTSDLAWLVGAGFAPLVALGLSAHFGL 426 ILVGF+LLGLSYGQAAGAVTANF ++YRYTGAALTSDL+WLVGAGFAPLVAL L++HFG+ Sbjct: 362 ILVGFSLLGLSYGQAAGAVTANFASRYRYTGAALTSDLSWLVGAGFAPLVALALASHFGM 421 Query: 427 AYVSIYLLSGAVCSLAALSVNRALDIR 453 AYV +YL+SGAVCSLAAL +NRAL+IR Sbjct: 422 AYVGLYLVSGAVCSLAALRLNRALEIR 448 >ref|YP_004156984.1| general substrate transporter [Variovorax paradoxus EPS] gb|ADU38873.1| general substrate transporter [Variovorax paradoxus EPS] Length = 450 Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/431 (74%), Positives = 371/431 (86%) Query: 20 NTPVGGSDNVNNAKSDHPVIAPGDIAIGVVIGRASEYFDFFVYAIASVLVFPTIFFPFEQ 79 NT G+ + +DH IAPG+IA+GVVIGRASEYFDFFVY IASVLVFP +FFPFEQ Sbjct: 17 NTSGNGAGPSQSGGADHSHIAPGEIAVGVVIGRASEYFDFFVYGIASVLVFPYVFFPFEQ 76 Query: 80 RLEGTLYSFTIFAFAFLARPFGTILFMAIQRKLGREVKLTLALFLLGLSTAGIAFLPTYE 139 RLEG LY+F +F+FAF+ARPFGT++ MAIQR+ GRE KLT+ALFLLG STAGIAFLP YE Sbjct: 77 RLEGILYAFVVFSFAFIARPFGTVISMAIQRRFGRETKLTIALFLLGTSTAGIAFLPGYE 136 Query: 140 HLGFTAIVLLSVLRIGQGLALGGSWDGLPSLLALNVPKNKRGWYAMLGQLGAPVGFIVAG 199 LGFTAIVLLSV R QGLALGGSWDGLPSLLALN P N+RGWYAMLGQLGAP+GF +A Sbjct: 137 SLGFTAIVLLSVFRFCQGLALGGSWDGLPSLLALNAPPNRRGWYAMLGQLGAPIGFFIAS 196 Query: 200 LVFAYLIGNLSSDDFLEWGWRYPFYVAFAINVVALFARLRLVASDEYAQLLKERELEPTG 259 +FAYL +LS +FL+WGWRY FYVAFAINVVALFARLRLVA++EY++LL+EREL+PT Sbjct: 197 ALFAYLYASLSIKEFLDWGWRYTFYVAFAINVVALFARLRLVATEEYSRLLEERELQPTS 256 Query: 260 VVDITRTQGRNLIIGALAALASYALFHLVSVFPLSWISLYSMRSMSDFLMVQVFGAVLMM 319 VV++TR+QG NL+IGA AALASYALFHL++VFPLSWI+LYS +S+++FL+VQ+ GAV Sbjct: 257 VVELTRSQGANLLIGAFAALASYALFHLITVFPLSWITLYSDQSITEFLIVQMIGAVFCA 316 Query: 320 VGIVLSGPIADRFGRRTTLGALAVLIAVLSGFVPTLINGGDTGQDIFILVGFALLGLSYG 379 GIV SG IADR GRR TLG LA LIAV SGF PTL++GG GQD+FIL+GF LLGLSYG Sbjct: 317 GGIVASGLIADRVGRRFTLGGLAALIAVFSGFAPTLLDGGRIGQDVFILLGFVLLGLSYG 376 Query: 380 QAAGAVTANFPAKYRYTGAALTSDLAWLVGAGFAPLVALGLSAHFGLAYVSIYLLSGAVC 439 QAAGAVT+NF KYRYTGAALT+DLAWL+GA FAPLVALGLSA+FGLAYVS+YLLSGA Sbjct: 377 QAAGAVTSNFEPKYRYTGAALTADLAWLIGAAFAPLVALGLSANFGLAYVSVYLLSGAAG 436 Query: 440 SLAALSVNRAL 450 +LAAL +NRAL Sbjct: 437 TLAALGLNRAL 447 >ref|YP_001354331.1| major facilitator transporter [Janthinobacterium sp. Marseille] gb|ABR89369.1| transporter of the MFS superfamily [Janthinobacterium sp. Marseille] Length = 447 Score = 637 bits (1644), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/451 (74%), Positives = 384/451 (85%), Gaps = 5/451 (1%) Query: 3 MASTHIHHPEVPGKFSANTPVGGSDNVNNAKSDHPVIAPGDIAIGVVIGRASEYFDFFVY 62 MA+T+ +P +P G + N + H IAPG+IAIGVVIGRASEYFDFFVY Sbjct: 1 MATTY--DTGLPDDSKLASP-GNGPRLVNTRGGH--IAPGEIAIGVVIGRASEYFDFFVY 55 Query: 63 AIASVLVFPTIFFPFEQRLEGTLYSFTIFAFAFLARPFGTILFMAIQRKLGREVKLTLAL 122 AIASVLVFP++FFPF Q LEGTLYSFT+FAFAFLARP GT+ FMAIQR+ RE KLTLAL Sbjct: 56 AIASVLVFPSVFFPFAQPLEGTLYSFTVFAFAFLARPLGTVAFMAIQRRFSREAKLTLAL 115 Query: 123 FLLGLSTAGIAFLPTYEHLGFTAIVLLSVLRIGQGLALGGSWDGLPSLLALNVPKNKRGW 182 FLLG STAGIAFLP+Y LG +AI+ LS+LRIGQG+ALGGSWDGLPSLLALN P+N+RGW Sbjct: 116 FLLGFSTAGIAFLPSYAQLGMSAILFLSLLRIGQGIALGGSWDGLPSLLALNAPQNRRGW 175 Query: 183 YAMLGQLGAPVGFIVAGLVFAYLIGNLSSDDFLEWGWRYPFYVAFAINVVALFARLRLVA 242 YAMLGQLGAPVGF++A +F++L+ LS DFLEWGWRYPFYVAFAINVVALFARLRLV+ Sbjct: 176 YAMLGQLGAPVGFLIAAGLFSFLLSELSRADFLEWGWRYPFYVAFAINVVALFARLRLVS 235 Query: 243 SDEYAQLLKERELEPTGVVDITRTQGRNLIIGALAALASYALFHLVSVFPLSWISLYSMR 302 + EY++LL E+ELEP +I + QGRNLIIGALAALASYALFHLV+VFPLSWISLYS R Sbjct: 236 TPEYSRLLDEQELEPVSATEIVQKQGRNLIIGALAALASYALFHLVTVFPLSWISLYSDR 295 Query: 303 SMSDFLMVQVFGAVLMMVGIVLSGPIADRFGRRTTLGALAVLIAVLSGFVPTLINGGDTG 362 S+S FL VQ+ GA L VG+V+SG IADRFGRRTTLG LA LIA+ SGFVP L+NGG G Sbjct: 296 SISAFLHVQMMGAALAAVGVVISGLIADRFGRRTTLGTLACLIAIFSGFVPMLLNGGTRG 355 Query: 363 QDIFILVGFALLGLSYGQAAGAVTANFPAKYRYTGAALTSDLAWLVGAGFAPLVALGLSA 422 +D+FIL+GFALLGLSYGQAAGAV+ANF AKYRYTGAALTSDLAWLVGA FAPLVALGLSA Sbjct: 356 EDLFILIGFALLGLSYGQAAGAVSANFHAKYRYTGAALTSDLAWLVGAAFAPLVALGLSA 415 Query: 423 HFGLAYVSIYLLSGAVCSLAALSVNRALDIR 453 HFGL YVS+YLLSGAV SLAALS+NRAL+I+ Sbjct: 416 HFGLGYVSLYLLSGAVGSLAALSLNRALEIK 446