BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0005.p         (161 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002872041.1| hypothetical protein PFLU2443 [Pseudomonas f...   145   2e-33
ref|ZP_07774906.1| hypothetical protein PFWH6_2305 [Pseudomonas ...   141   4e-32
ref|YP_372587.1| hypothetical protein Bcep18194_B1829 [Burkholde...   129   1e-28
ref|YP_002233941.1| hypothetical protein BCAM1325 [Burkholderia ...   125   2e-27
emb|CAQ36912.1| conserved hypothetical protein [Ralstonia solana...   123   7e-27

>ref|YP_002872041.1| hypothetical protein PFLU2443 [Pseudomonas fluorescens SBW25]
 emb|CAY48670.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
          Length = 182

 Score =  145 bits (366), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/153 (49%), Positives = 95/153 (62%), Gaps = 5/153 (3%)

Query: 1   MWDNTPGLYFKSFSLREAGKNGAPTNVYSSIYLWKDAMAASEFLTSDRFEAVLATFGRPG 60
           +WDN  GL FK+F  +E G      NVYSS+YLW D + A++FL  +RF+ VL +FGRP 
Sbjct: 29  LWDNAEGLLFKAFIAQERG-----GNVYSSVYLWADPLQAADFLLGERFQKVLDSFGRPH 83

Query: 61  IELWLPLDAQAGPAQQGRWIYREDLPFGDTTDMGALRAAEHERNRALAHRAETVAAVTAL 120
           IE WLPLD Q GPAQ    +YRE  P     D  +L A E  RN+ +A R++T A   AL
Sbjct: 84  IESWLPLDVQWGPAQGALSLYREAWPLEPGADRASLLAEEKRRNQQVAGRSDTFAVCLAL 143

Query: 121 DPAGWKLVRLHITSAAYDAEHAGDGYEVLYLAQ 153
           D   W+LVR  ++SAA D    G GY VLYLAQ
Sbjct: 144 DVQAWRLVRFTLSSAALDEARQGTGYHVLYLAQ 176


>ref|ZP_07774906.1| hypothetical protein PFWH6_2305 [Pseudomonas fluorescens WH6]
 gb|EFQ63854.1| hypothetical protein PFWH6_2305 [Pseudomonas fluorescens WH6]
          Length = 185

 Score =  141 bits (355), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 71/153 (46%), Positives = 94/153 (61%)

Query: 1   MWDNTPGLYFKSFSLREAGKNGAPTNVYSSIYLWKDAMAASEFLTSDRFEAVLATFGRPG 60
           +WD T GL FK+F  +E G+    +N+Y+S+YLW D + A++FL  +RF+ VL +FGRP 
Sbjct: 29  VWDRTEGLLFKAFIAQECGQAPGVSNLYASVYLWSDPLQAADFLLGERFQKVLDSFGRPD 88

Query: 61  IELWLPLDAQAGPAQQGRWIYREDLPFGDTTDMGALRAAEHERNRALAHRAETVAAVTAL 120
           IE WLPLD   GPAQ    +YRE+       D  A    E   NR LA  ++T A   AL
Sbjct: 89  IESWLPLDVLRGPAQSALSLYREEWALEPGADRLARLVEEKRCNRQLADSSDTFAVFLAL 148

Query: 121 DPAGWKLVRLHITSAAYDAEHAGDGYEVLYLAQ 153
           D   W+LVR+ ++S A D  H G GY+VLYLAQ
Sbjct: 149 DVQAWRLVRITLSSHALDPGHPGTGYQVLYLAQ 181


>ref|YP_372587.1| hypothetical protein Bcep18194_B1829 [Burkholderia sp. 383]
 gb|ABB11943.1| hypothetical protein Bcep18194_B1829 [Burkholderia sp. 383]
          Length = 192

 Score =  129 bits (325), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 69/159 (43%), Positives = 97/159 (61%)

Query: 1   MWDNTPGLYFKSFSLREAGKNGAPTNVYSSIYLWKDAMAASEFLTSDRFEAVLATFGRPG 60
           +WD+TP L FK F LREAG+ GA  N Y+S+YLW++  A + F+T  R+  V  +FGR  
Sbjct: 29  LWDDTPDLVFKGFLLREAGRYGATENGYASLYLWRNEQAFARFVTDGRYRVVTDSFGRAP 88

Query: 61  IELWLPLDAQAGPAQQGRWIYREDLPFGDTTDMGALRAAEHERNRALAHRAETVAAVTAL 120
           I++ + LDA+ G A  GR++  E +      D+ A  A E  RNR +A R  TVAA  +L
Sbjct: 89  IDVQVALDARKGSASTGRFVRLEAVDIPADADLDATLAQEVARNREVAARQGTVAAAVSL 148

Query: 121 DPAGWKLVRLHITSAAYDAEHAGDGYEVLYLAQPLLAEL 159
           DP  W+L R+ ++    D   AG  Y+VL+LA+PLL  L
Sbjct: 149 DPLRWRLTRVLVSEHEPDNGGAGTVYQVLHLARPLLDTL 187


>ref|YP_002233941.1| hypothetical protein BCAM1325 [Burkholderia cenocepacia J2315]
 emb|CAR55182.1| conserved hypothetical protein [Burkholderia cenocepacia J2315]
          Length = 192

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 69/159 (43%), Positives = 93/159 (58%)

Query: 1   MWDNTPGLYFKSFSLREAGKNGAPTNVYSSIYLWKDAMAASEFLTSDRFEAVLATFGRPG 60
           +WD+TP L FK F LREAG++GA  N Y+S YLW++  A + F+T  R+  V  +FGR  
Sbjct: 29  LWDDTPDLLFKGFLLREAGRHGATENGYASFYLWRNEQAFARFVTDGRYRVVTDSFGRAP 88

Query: 61  IELWLPLDAQAGPAQQGRWIYREDLPFGDTTDMGALRAAEHERNRALAHRAETVAAVTAL 120
           I+  + LDA+ G A  GR+   E +      D+ A+ A E  RNR  A R   VAA  +L
Sbjct: 89  IDTQIALDARKGSASTGRFARLETIEIPADADLDAVLAREIARNREAAARPGVVAAAVSL 148

Query: 121 DPAGWKLVRLHITSAAYDAEHAGDGYEVLYLAQPLLAEL 159
           DP  W+L R  +T    D   AG  Y+VL+LA+PLL  L
Sbjct: 149 DPLRWRLTRALVTEHEPDDGGAGTMYQVLHLARPLLDTL 187


>emb|CAQ36912.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
          Length = 188

 Score =  123 bits (309), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 69/159 (43%), Positives = 90/159 (56%)

Query: 1   MWDNTPGLYFKSFSLREAGKNGAPTNVYSSIYLWKDAMAASEFLTSDRFEAVLATFGRPG 60
           +WD  P L+FK+F LRE G+ GA    YSS+YLW+   A  +FL + R+ AV   FGR  
Sbjct: 29  LWDAAPDLHFKAFLLRERGQFGAAAGSYSSLYLWRHDGAFRDFLVNGRYRAVTDRFGRAD 88

Query: 61  IELWLPLDAQAGPAQQGRWIYREDLPFGDTTDMGALRAAEHERNRALAHRAETVAAVTAL 120
           I+  L LDA+ GP    R+ YREDL      D+ A+  AE ERN A+A R  TVA    +
Sbjct: 89  IQTRLVLDARKGPGCAPRFAYREDLDIPLDADLTAILHAEMERNAAVAGRPGTVATAVGV 148

Query: 121 DPAGWKLVRLHITSAAYDAEHAGDGYEVLYLAQPLLAEL 159
           D   W L R+ ++  +      G GY VL+LA PLL  L
Sbjct: 149 DTKDWTLTRILLSELSPSGNEPGVGYTVLHLAAPLLGAL 187