BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0248.p (230 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value F1VXT2.1 F1VXT2_9BURK Capsule polysaccharide export protein 309 2e-82 A4G321.1 A4G321_HERAR Putative polysaccharide export protein 289 2e-76 A6SVM5.1 A6SVM5_JANMA Polysaccharide export outer membrane protein 282 2e-74 D8ISE7.1 D8ISE7_HERSS Periplasmic polysaccharide export protein 263 1e-68 Q1GZP4.1 Q1GZP4_METFK Polysaccharide export protein 253 2e-65 >F1VXT2.1 F1VXT2_9BURK Capsule polysaccharide export protein Length = 262 Score = 309 bits (791), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 147/230 (63%), Positives = 186/230 (80%) Query: 1 VKISVFGNPDLNLETQVSDAGDITFPLIGNVGVGGLPVADAEKKISALLTQGGFLRKAQV 60 +K+SVFGNPDL+LET+VS G I+FPLIG V +GGL ++AEKKI+++L GGFLRK QV Sbjct: 33 IKVSVFGNPDLSLETRVSQTGSISFPLIGEVAIGGLAASEAEKKIASMLETGGFLRKPQV 92 Query: 61 NILVTKVQSQMVSVLGQVLHPGRYVISGQRKVTDMLAMAGGVGPDGGDTVTVIGMRNGQS 120 N+LVT +QSQ VSVLGQV PGRY I G R +TD+LA+AGGVGPDGGD VT++ R+GQ+ Sbjct: 93 NLLVTVLQSQQVSVLGQVTCPGRYPIDGTRTLTDILALAGGVGPDGGDIVTIVRTRDGQT 152 Query: 121 SKQVINLAQIVHSPEMTPDLELRNGDTVYVDRAPKFYIYGEVQHPGGYRLEADMTVLQAL 180 +K+ I+L +++ S + +LEL + D VYV+RAP+FYIYGEVQ G +RLE DMTVLQAL Sbjct: 153 TKEAIDLVEMMRSGDFNKNLELTSNDVVYVERAPRFYIYGEVQRAGFFRLERDMTVLQAL 212 Query: 181 SVGGGLTPRGTERGLRIKRRDASGNLQMIDAKNNTVLKADDIVYVKESLF 230 S GGGL+PRGTERG+RIKRRDA G L I AK + +LK DD+V+VKES+F Sbjct: 213 SAGGGLSPRGTERGIRIKRRDADGKLSEISAKMDDLLKVDDVVFVKESMF 262 >A4G321.1 A4G321_HERAR Putative polysaccharide export protein Length = 267 Score = 289 bits (740), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 138/230 (60%), Positives = 189/230 (82%) Query: 1 VKISVFGNPDLNLETQVSDAGDITFPLIGNVGVGGLPVADAEKKISALLTQGGFLRKAQV 60 +KI+VFGNPDL LET+VS+AG I++PL+G+V VGGL +AE+KI+ LL +GGF+RK QV Sbjct: 38 LKITVFGNPDLTLETRVSEAGSISYPLVGDVKVGGLSSNEAERKIAELLDKGGFVRKPQV 97 Query: 61 NILVTKVQSQMVSVLGQVLHPGRYVISGQRKVTDMLAMAGGVGPDGGDTVTVIGMRNGQS 120 N++VT++QSQ VSVLGQV PGRY + G+R +TD+LA+AGG + GDTV + ++G++ Sbjct: 98 NLMVTEMQSQQVSVLGQVNKPGRYPVDGKRSLTDILALAGGANEEAGDTVILTHTQDGKT 157 Query: 121 SKQVINLAQIVHSPEMTPDLELRNGDTVYVDRAPKFYIYGEVQHPGGYRLEADMTVLQAL 180 SK++I+L ++V S + + +L GD+++V+RAP+FYIYGEVQ PG Y+LE DM VLQAL Sbjct: 158 SKEIIDLLELVRSGDPAKNRQLTAGDSLFVERAPRFYIYGEVQKPGSYKLERDMMVLQAL 217 Query: 181 SVGGGLTPRGTERGLRIKRRDASGNLQMIDAKNNTVLKADDIVYVKESLF 230 S GGGL+PRGTERG+RIKRRDA+G LQ+I+ K++ +LK +DIVYVKESLF Sbjct: 218 SSGGGLSPRGTERGVRIKRRDANGVLQIINVKHDDLLKPNDIVYVKESLF 267 >A6SVM5.1 A6SVM5_JANMA Polysaccharide export outer membrane protein Length = 262 Score = 282 bits (722), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 139/230 (60%), Positives = 181/230 (78%) Query: 1 VKISVFGNPDLNLETQVSDAGDITFPLIGNVGVGGLPVADAEKKISALLTQGGFLRKAQV 60 VKI+VFGN DL +ET+VS+AG I+FPL+G V VGGL AEKKI+ LL +GGF+R QV Sbjct: 33 VKITVFGNNDLTVETRVSEAGSISFPLVGEVKVGGLSSNQAEKKIADLLDKGGFIRNPQV 92 Query: 61 NILVTKVQSQMVSVLGQVLHPGRYVISGQRKVTDMLAMAGGVGPDGGDTVTVIGMRNGQS 120 N++VT++QSQ VSVLGQV PGRY + G+R +TD+LAMAGG + DTV + +G++ Sbjct: 93 NLMVTEMQSQQVSVLGQVNKPGRYPVDGKRSLTDVLAMAGGANEEAADTVILTHTSDGKT 152 Query: 121 SKQVINLAQIVHSPEMTPDLELRNGDTVYVDRAPKFYIYGEVQHPGGYRLEADMTVLQAL 180 SK+ I+L ++V S + + + EL GD V+V+RAP+FYIYGEVQ PG Y+LE +M VLQAL Sbjct: 153 SKETIDLLELVRSGDPSKNRELVAGDQVFVERAPRFYIYGEVQKPGSYKLERNMMVLQAL 212 Query: 181 SVGGGLTPRGTERGLRIKRRDASGNLQMIDAKNNTVLKADDIVYVKESLF 230 S GGGL+PRGTERG+RIKRRDA+G LQ++ K++ +LK DDIVYVKESLF Sbjct: 213 STGGGLSPRGTERGVRIKRRDANGVLQIMTVKHDDLLKPDDIVYVKESLF 262 >D8ISE7.1 D8ISE7_HERSS Periplasmic polysaccharide export protein Length = 264 Score = 263 bits (673), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 127/230 (55%), Positives = 172/230 (74%) Query: 1 VKISVFGNPDLNLETQVSDAGDITFPLIGNVGVGGLPVADAEKKISALLTQGGFLRKAQV 60 ++I+V+G+ DL LET++S+AG I++PLIG V +GG+ A AE+KI+ +L QGG+L QV Sbjct: 35 IRINVYGSQDLTLETRISEAGVISYPLIGEVKIGGMSTAQAERKIAGMLKQGGYLVNPQV 94 Query: 61 NILVTKVQSQMVSVLGQVLHPGRYVISGQRKVTDMLAMAGGVGPDGGDTVTVIGMRNGQS 120 NILVT SQM+SVLGQV PGRY + G+R V D++A+AGGV PDGGDT+T++ +G+ Sbjct: 95 NILVTAPASQMISVLGQVYKPGRYPLDGRRNVADVIALAGGVNPDGGDTITIVRTEDGKV 154 Query: 121 SKQVINLAQIVHSPEMTPDLELRNGDTVYVDRAPKFYIYGEVQHPGGYRLEADMTVLQAL 180 ++ +++ I H+ + T + D VYV+R +FYIYGEVQ PG Y+LE TVLQAL Sbjct: 155 TRTAVDIYAITHNGDTTELPTVGANDVVYVERYQRFYIYGEVQRPGAYKLERGTTVLQAL 214 Query: 181 SVGGGLTPRGTERGLRIKRRDASGNLQMIDAKNNTVLKADDIVYVKESLF 230 ++GGGLTPRGTERGL++KRRDA+G LQ I K + +L DDIVYVKES F Sbjct: 215 TLGGGLTPRGTERGLKVKRRDANGELQEISVKKDDLLLPDDIVYVKESWF 264 >Q1GZP4.1 Q1GZP4_METFK Polysaccharide export protein Length = 270 Score = 253 bits (645), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 119/230 (51%), Positives = 174/230 (75%) Query: 1 VKISVFGNPDLNLETQVSDAGDITFPLIGNVGVGGLPVADAEKKISALLTQGGFLRKAQV 60 ++ISVF PDL+LE +VS++G IT+PLIG V VGG A AE+KI+++L GGFL+ V Sbjct: 41 LRISVFEQPDLSLEVRVSESGTITYPLIGEVRVGGETPAAAERKIASMLESGGFLKNPHV 100 Query: 61 NILVTKVQSQMVSVLGQVLHPGRYVISGQRKVTDMLAMAGGVGPDGGDTVTVIGMRNGQS 120 NI+V ++QSQ VSVLGQV PGRY + + + D+LA+AGGV PDGGD ++++ G+S Sbjct: 101 NIIVAQLQSQQVSVLGQVNRPGRYPLDSAKSLADVLALAGGVAPDGGDLISLVRKIEGKS 160 Query: 121 SKQVINLAQIVHSPEMTPDLELRNGDTVYVDRAPKFYIYGEVQHPGGYRLEADMTVLQAL 180 +++I+ A+++ ++ ++ L GD +YVDRAP+FYIYGEVQ PG YRLE MTVLQAL Sbjct: 161 VREIIDFAEMMRDGDLNKNILLTAGDIIYVDRAPRFYIYGEVQRPGQYRLEYHMTVLQAL 220 Query: 181 SVGGGLTPRGTERGLRIKRRDASGNLQMIDAKNNTVLKADDIVYVKESLF 230 +VGGGL+ RGTE+G+++KR D G +++I K++ ++ +D+VYV+ES+F Sbjct: 221 AVGGGLSLRGTEKGIKVKRLDDEGGVKIIKVKHDDFIQPNDVVYVQESVF 270