BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0203.p (289 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IY00.1 D8IY00_HERSS Methyl-accepting chemotaxis transducer tra... 373 e-101 C5CXU6.1 C5CXU6_VARPS Methyl-accepting chemotaxis sensory transd... 252 6e-65 A6SUA4.1 A6SUA4_JANMA Methyl-accepting chemotaxis transducer tra... 210 2e-52 A6T1W8.1 A6T1W8_JANMA Methyl-accepting chemotaxis protein 205 7e-51 A6SX63.1 A6SX63_JANMA Methyl-accepting chemotaxis protein 204 1e-50 >D8IY00.1 D8IY00_HERSS Methyl-accepting chemotaxis transducer transmembrane protein Length = 533 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 174/254 (68%), Positives = 210/254 (82%) Query: 1 MKNYKIGVRLGIGFIAMLMLMAVMVGIGVWRLQGIGDATDDMVKNALQKERDASRWHAAI 60 MKN KIGVRL IGFIA+LMLMAVMV +GVWRL IGDATDDM + AL+KERDA +WHAAI Sbjct: 1 MKNLKIGVRLAIGFIALLMLMAVMVALGVWRLGSIGDATDDMTRIALKKERDAVQWHAAI 60 Query: 61 KENGVRTFAVMRSDDAEFQKYFQTQIDAESKKVSDTQKRVEAAISSPEEKQLFDEVGKLR 120 KENGVRTFAVM+SDD FQ YFQ QIDA+S ++S QK VEAAI+ EEK+LFDEVGKLR Sbjct: 61 KENGVRTFAVMKSDDDAFQAYFQKQIDAQSARISQLQKEVEAAITDAEEKRLFDEVGKLR 120 Query: 121 AVYRTTREDIFKMKTAGNAEEAKQLTNTKLVKMMDEYSGSVLKYANYQTEIINQAAQHIN 180 A YR TR+ IF +KTAG+ A+++T+T LVKMMD+Y+ VL+YA++Q ++I+Q A IN Sbjct: 121 AAYRATRQSIFDVKTAGDDARAREMTDTTLVKMMDDYADGVLRYADFQKQVIDQTAAAIN 180 Query: 181 DSYQSGRTLLLSLGMIELILGGLLGWLLTLSITRPLNEAVSIAETVASGDLTSHIDGSGK 240 Y+SGR++LL+LG IE++LG L WLLT SITRPLN+AV+IAETVA+GDLTS ID S + Sbjct: 181 RDYRSGRSMLLALGAIEIVLGAALAWLLTRSITRPLNQAVTIAETVAAGDLTSRIDSSSR 240 Query: 241 DETSKLLQALKTMN 254 DET KLL ALKTMN Sbjct: 241 DETGKLLAALKTMN 254 >C5CXU6.1 C5CXU6_VARPS Methyl-accepting chemotaxis sensory transducer Length = 559 Score = 252 bits (643), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 129/266 (48%), Positives = 175/266 (65%), Gaps = 1/266 (0%) Query: 1 MKNYKIGVRLGIGFIAMLMLMAVMVGIGVWRLQGIGDATDDMVKNALQKERDASRWHAAI 60 MKN KIG RLGIGF +L LMA + GIGV+RLQG+GDA +MV+ +L KER A+ W Sbjct: 1 MKNLKIGTRLGIGFALVLALMACIAGIGVFRLQGVGDAVQEMVQRSLVKERLAANWLLNT 60 Query: 61 KENGVRTFAVMRSDDAEFQKYFQTQIDAESKKVSDTQKRVEAAISSPEEKQLFDEVGKLR 120 N VRTFA+++S+DAE Q Y Q Q+ S +S+TQ ++EA + SPEE+ + ++ + R Sbjct: 61 SSNSVRTFALVKSNDAEVQDYLQKQMSKTSAGISETQAKLEAMLDSPEEQAISADIKEKR 120 Query: 121 AVYRTTREDIFKMKTAGNAEEAKQLTNTKLVKMMDEYSGSVLKYANYQTEIINQAAQHIN 180 + Y R I K+K G EEA LTN KLV M++ Y S+ +Q E I++AA ++ Sbjct: 121 SQYVGLRNTILKLKAEGKQEEAAALTNGKLVPMLEVYDASIRGMLTHQAERIDKAADAVD 180 Query: 181 DSYQSGRTLLLSLGMIELILGGLLGWLLTLSITRPLNEAVSIAETVASGDLTSHIDGSGK 240 ++GR ++ L M L+LGG+L WLLT SITRPLNEAV +A+TVA GDLTS I+ S + Sbjct: 181 SLNRAGRMNVIVLAMAALLLGGVLAWLLTRSITRPLNEAVRVAQTVADGDLTSRIESSSR 240 Query: 241 DETSKLLQALKTMNXPPPPVFHCGIR 266 DET +L+ ALK MN V G+R Sbjct: 241 DETGQLMLALKNMNASLATVV-SGVR 265 >A6SUA4.1 A6SUA4_JANMA Methyl-accepting chemotaxis transducer transmembrane protein Length = 568 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 106/253 (41%), Positives = 156/253 (61%) Query: 1 MKNYKIGVRLGIGFIAMLMLMAVMVGIGVWRLQGIGDATDDMVKNALQKERDASRWHAAI 60 + N KI RL GF +L LM +M +G+ RLQ +G + D M + L KER A W +A+ Sbjct: 3 ITNLKISTRLSFGFALLLTLMVMMTVVGILRLQEVGTSADVMTQTMLPKERLAQEWLSAV 62 Query: 61 KENGVRTFAVMRSDDAEFQKYFQTQIDAESKKVSDTQKRVEAAISSPEEKQLFDEVGKLR 120 NG RT A ++ AE Q +FQ Q+D S + ++ QK +E+ I +PE+K+LF+E+ R Sbjct: 63 DVNGARTLASAKTTSAEDQAFFQKQMDKTSVRANELQKEIESMIKTPEDKRLFEELVVAR 122 Query: 121 AVYRTTREDIFKMKTAGNAEEAKQLTNTKLVKMMDEYSGSVLKYANYQTEIINQAAQHIN 180 YR R+ +FK+K G EA+ L N K++ M+ YS S+ + ++I++A I Sbjct: 123 NAYRDIRQTVFKLKAEGKLPEAQLLINEKMLPAMNAYSNSIDAVLQNEKKLIDEAGTSIQ 182 Query: 181 DSYQSGRTLLLSLGMIELILGGLLGWLLTLSITRPLNEAVSIAETVASGDLTSHIDGSGK 240 ++ SGR+LL+ L + LG W L +SITRPLN AV++A TVASGDL++ I+ S Sbjct: 183 SAFLSGRSLLIGLLAAAVALGVFFAWRLAISITRPLNRAVTVARTVASGDLSAKIEVSSN 242 Query: 241 DETSKLLQALKTM 253 DET +L+QALK M Sbjct: 243 DETGQLMQALKDM 255 >A6T1W8.1 A6T1W8_JANMA Methyl-accepting chemotaxis protein Length = 567 Score = 205 bits (521), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 114/257 (44%), Positives = 158/257 (61%), Gaps = 4/257 (1%) Query: 1 MKNYKIGVRLGIGFIAMLMLMAVMVGIGVWRLQGIGDATDDMVKNALQKERDASRWHAAI 60 + N KIG+RLG+ F +L+LMA M+ +GVWRLQ + AT M + A KER W+ Sbjct: 3 ISNLKIGMRLGLAFAVILLLMASMIVVGVWRLQDVAQATVHM-EEAAHKERLTHEWYLGN 61 Query: 61 KENGVRTFAVMRSDDAEFQKYFQTQIDAESKKVSDTQKRVEAAISSPEEKQLFDEVGKLR 120 N +RT A +RS+DAE QK FQ +++ +S+++S Q + A I S E K+L VG+ R Sbjct: 62 VANAIRTAARIRSNDAEIQKQFQKEMELQSQEISKLQNEIVALIHSEEGKKLMSVVGEKR 121 Query: 121 AVYRTTREDIFKMKTAGNAEEAK---QLTNTKLVKMMDEYSGSVLKYANYQTEIINQAAQ 177 Y R+D+FK+K NA +L TK+ M Y+ SV ++Q I +A Sbjct: 122 TAYMDIRKDVFKLKAEANAAADLAATKLVETKMDPAMAAYNESVQAVVSFQQVIFQRAKA 181 Query: 178 HINDSYQSGRTLLLSLGMIELILGGLLGWLLTLSITRPLNEAVSIAETVASGDLTSHIDG 237 ++ Y SGRT+L++LG I LIL L WLL+ SITRPL+ AVS+A TVASGDL + I Sbjct: 182 DVDALYASGRTILITLGSIALILSAFLAWLLSRSITRPLDYAVSVARTVASGDLRNKIQS 241 Query: 238 SGKDETSKLLQALKTMN 254 S DET +LL+AL+ MN Sbjct: 242 SSNDETGQLLRALRDMN 258 >A6SX63.1 A6SX63_JANMA Methyl-accepting chemotaxis protein Length = 571 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 120/255 (47%), Positives = 169/255 (66%), Gaps = 3/255 (1%) Query: 1 MKNYKIGVRLGIGFIAMLMLMAVMVGIGVWRLQGIGDATDDMVKNALQKERDASRWHAAI 60 + N KIGVRLG+GF +L+L+A M G+ RL+ I +A+ ++V +L+K++ A W A Sbjct: 3 IANMKIGVRLGLGFGLILLLVAAMGATGIMRLENINNASRNLVDQSLKKQKAAEDWLLAT 62 Query: 61 KENGVRTFAVMRSDDAEFQKYFQTQIDAESKKVSDTQKRVEAAISSPEEKQLFDEVGKLR 120 NGVRT A+++S D E Q++FQ I A+SK+++D Q VEA++ +PEEKQLF EVGK R Sbjct: 63 SVNGVRTVALVKSADPETQQFFQKAITAQSKQITDIQNGVEASLVTPEEKQLFAEVGKKR 122 Query: 121 AVYRTTREDIFKMKTAGNAEEAKQLTNTKLVKMMDEYSGSVLKY-ANYQTEIINQAAQHI 179 AVY R+ IF +K GN EAKQL ++K++ +D Y SV + A+YQ E + A Q I Sbjct: 123 AVYVDLRKAIFAVKEKGNEAEAKQLIDSKMIPALDAYVESVREVLAHYQNE-VKLADQSI 181 Query: 180 NDSYQSGRTLLLSLGMIELILGGLLGWLLTLSITRPLNEAVSIAETVASGDLTSHID-GS 238 Y SGR L+ +I L+LG L+ W LT+ ITRPL EA+S+AE+VA GDLT+ + Sbjct: 182 TADYASGRMTLIIGAVIALLLGALIAWRLTVGITRPLQEALSVAESVAEGDLTARSTMPA 241 Query: 239 GKDETSKLLQALKTM 253 DE LL+AL+ M Sbjct: 242 ANDEAGLLLKALRRM 256