BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0171.p (273 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IY20.1 D8IY20_HERSS Exodeoxyribonuclease III protein EC=3.1.11.2 468 e-130 A4G1K9.1 A4G1K9_HERAR Putative Nuclease 424 e-117 A6SUD3.1 A6SUD3_JANMA Exodeoxyribonuclease III EC=3.1.11.2 423 e-116 F1W1U6.1 F1W1U6_9BURK Exodeoxyribonuclease III 419 e-115 C3XBT5.1 C3XBT5_OXAFO Exodeoxyribonuclease III 392 e-107 >D8IY20.1 D8IY20_HERSS Exodeoxyribonuclease III protein EC=3.1.11.2 Length = 258 Score = 468 bits (1204), Expect = e-130, Method: Compositional matrix adjust. Identities = 214/256 (83%), Positives = 236/256 (92%) Query: 16 MPKIVSANLNGIRSAAKKGFFEWMAKESADFICVQELKAQEADMSPEFLAPEGYVGHFHY 75 MPKIVSANLNGIRSAAKKGFFEW+ KE+ DF+CVQELKAQ ADM+ +FLAP GYVGHFHY Sbjct: 1 MPKIVSANLNGIRSAAKKGFFEWLQKEAPDFVCVQELKAQAADMTEQFLAPAGYVGHFHY 60 Query: 76 AVKKGYSGVGVYSKRTPNAVRIGFGVQEFDDEGRYVECDFGDLTVISLYCPSGSSSEERQ 135 A KKGYSGVGVYS+R P++VRIGFG EFDDEGRYVECD+GDLTVISLY PSGSSSEERQ Sbjct: 61 AQKKGYSGVGVYSRRQPDSVRIGFGNTEFDDEGRYVECDYGDLTVISLYAPSGSSSEERQ 120 Query: 136 QAKFRFMEVFLPHLQELKNSGREIVICGDWNIAHKEIDLKNWKSNQKNSGFLPEERAWLT 195 +AKFRFME FLPHL EL+ SGRE+VICGDWNIAHKEIDLKNWKSNQKNSGFLPEERAW+T Sbjct: 121 EAKFRFMEAFLPHLMELEKSGREVVICGDWNIAHKEIDLKNWKSNQKNSGFLPEERAWMT 180 Query: 196 RVFDELGLVDVYRTIHPETTGDAYTWWSNRGQAWANNVGWRIDYHIATAGIAKKAKTAAI 255 R+FD+LGLVDVYR +HPETTG+AYTWWSNRGQAWANNVGWRIDYH++T GIA KA +AAI Sbjct: 181 RIFDQLGLVDVYRRLHPETTGEAYTWWSNRGQAWANNVGWRIDYHVSTPGIAAKAVSAAI 240 Query: 256 YKTARFSDHSPLTIDY 271 YK RFSDH+PLT+ Y Sbjct: 241 YKEQRFSDHAPLTVVY 256 >A4G1K9.1 A4G1K9_HERAR Putative Nuclease Length = 259 Score = 424 bits (1090), Expect = e-117, Method: Compositional matrix adjust. Identities = 196/256 (76%), Positives = 220/256 (85%) Query: 16 MPKIVSANLNGIRSAAKKGFFEWMAKESADFICVQELKAQEADMSPEFLAPEGYVGHFHY 75 M KIVSANLNGIRSAAKKGFF+WMA+ SAD+ICVQELKAQEADM+P+FL PEGY G+FHY Sbjct: 1 MLKIVSANLNGIRSAAKKGFFQWMARHSADYICVQELKAQEADMTPDFLTPEGYFGYFHY 60 Query: 76 AVKKGYSGVGVYSKRTPNAVRIGFGVQEFDDEGRYVECDFGDLTVISLYCPSGSSSEERQ 135 A KKGYSG GVY K P+ V+IGF EFD EGRYV+CDFG+L+VIS+YCPSGSS EERQ Sbjct: 61 AEKKGYSGAGVYCKTKPDNVQIGFNCPEFDAEGRYVQCDFGNLSVISVYCPSGSSGEERQ 120 Query: 136 QAKFRFMEVFLPHLQELKNSGREIVICGDWNIAHKEIDLKNWKSNQKNSGFLPEERAWLT 195 QAKFRFM+VFLPHL ELK+ GRE VICGDWNIAH EIDLKN+K N+KNSGFLPEER WLT Sbjct: 121 QAKFRFMDVFLPHLLELKSQGREFVICGDWNIAHNEIDLKNYKGNRKNSGFLPEEREWLT 180 Query: 196 RVFDELGLVDVYRTIHPETTGDAYTWWSNRGQAWANNVGWRIDYHIATAGIAKKAKTAAI 255 RVFDE+GLVDVYR +HP TT + YTWWSNRGQA+A NVGWRIDY +AT +A +A A I Sbjct: 181 RVFDEVGLVDVYRRLHPGTTEECYTWWSNRGQAYAKNVGWRIDYQVATPSLAARAHAAEI 240 Query: 256 YKTARFSDHSPLTIDY 271 YK RFSDH+PLTI Y Sbjct: 241 YKVERFSDHAPLTITY 256 >A6SUD3.1 A6SUD3_JANMA Exodeoxyribonuclease III EC=3.1.11.2 Length = 259 Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust. Identities = 197/256 (76%), Positives = 219/256 (85%) Query: 16 MPKIVSANLNGIRSAAKKGFFEWMAKESADFICVQELKAQEADMSPEFLAPEGYVGHFHY 75 M KIVSANLNGIRSAAKKGFF WMAK ADFICVQELKAQ DM+PEFL P GY G+FHY Sbjct: 1 MLKIVSANLNGIRSAAKKGFFTWMAKHDADFICVQELKAQAPDMTPEFLTPPGYTGYFHY 60 Query: 76 AVKKGYSGVGVYSKRTPNAVRIGFGVQEFDDEGRYVECDFGDLTVISLYCPSGSSSEERQ 135 A KKGYSG GVY K P+ V+IGFG EFD EGRYV+CDFG L+VIS+YCPSGSSSEERQ Sbjct: 61 AEKKGYSGAGVYCKTVPDHVQIGFGCSEFDAEGRYVQCDFGKLSVISVYCPSGSSSEERQ 120 Query: 136 QAKFRFMEVFLPHLQELKNSGREIVICGDWNIAHKEIDLKNWKSNQKNSGFLPEERAWLT 195 AKFRFM+VFLPHL ELK GR+ VICGDWNIAH EIDLKN+K N+KNSGFLPEERAWL+ Sbjct: 121 LAKFRFMDVFLPHLLELKAQGRDFVICGDWNIAHNEIDLKNFKGNRKNSGFLPEERAWLS 180 Query: 196 RVFDELGLVDVYRTIHPETTGDAYTWWSNRGQAWANNVGWRIDYHIATAGIAKKAKTAAI 255 RVFDE+GLVDVYR +HP TT + YTWWSNRGQA+A NVGWRIDY +AT +A+ A++AAI Sbjct: 181 RVFDEVGLVDVYRRLHPTTTEECYTWWSNRGQAYAKNVGWRIDYQVATPALAETARSAAI 240 Query: 256 YKTARFSDHSPLTIDY 271 YK RFSDH+PLTIDY Sbjct: 241 YKDERFSDHAPLTIDY 256 >F1W1U6.1 F1W1U6_9BURK Exodeoxyribonuclease III Length = 256 Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust. Identities = 194/256 (75%), Positives = 220/256 (85%), Gaps = 2/256 (0%) Query: 16 MPKIVSANLNGIRSAAKKGFFEWMAKESADFICVQELKAQEADMSPEFLAPEGYVGHFHY 75 M KI++ANLNGIRSA+KKGFFEWMAK+ ADFICVQELKAQ ADMSPE LAPEGY G+FHY Sbjct: 1 MLKIIAANLNGIRSASKKGFFEWMAKQDADFICVQELKAQAADMSPEMLAPEGYHGYFHY 60 Query: 76 AVKKGYSGVGVYSKRTPNAVRIGFGVQEFDDEGRYVECDFGDLTVISLYCPSGSSSEERQ 135 A KKGYSG GVYSKR P+ V GFG EFD EGRYV+CD+G+L+++S+YCPSGSS EERQ Sbjct: 61 AEKKGYSGTGVYSKRVPDQVITGFGTPEFDAEGRYVQCDYGNLSIVSVYCPSGSSGEERQ 120 Query: 136 QAKFRFMEVFLPHLQELKNSGREIVICGDWNIAHKEIDLKNWKSNQKNSGFLPEERAWLT 195 AKFRFM+VFLPHL LK SGRE+VICGDWNIAH+EIDLKNWK N+KNSGFLPEERAWL+ Sbjct: 121 LAKFRFMDVFLPHLAALKASGREVVICGDWNIAHQEIDLKNWKGNKKNSGFLPEERAWLS 180 Query: 196 RVFDELGLVDVYRTIHPETTGDAYTWWSNRGQAWANNVGWRIDYHIATAGIAKKAKTAAI 255 R+FDE+ LVDV+R + + + YTWWSNRGQAWANNVGWRIDY IAT GIA AK AI Sbjct: 181 RLFDEVALVDVFRRV--DERAEQYTWWSNRGQAWANNVGWRIDYQIATPGIAATAKAVAI 238 Query: 256 YKTARFSDHSPLTIDY 271 YK RFSDH+PLTI+Y Sbjct: 239 YKDERFSDHAPLTIEY 254 >C3XBT5.1 C3XBT5_OXAFO Exodeoxyribonuclease III Length = 260 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 180/256 (70%), Positives = 211/256 (82%) Query: 16 MPKIVSANLNGIRSAAKKGFFEWMAKESADFICVQELKAQEADMSPEFLAPEGYVGHFHY 75 M I S NLNGIRSA KKGF +WM + +DF+C+QE+KAQ D++PE P+GY G+F Sbjct: 1 MFSITSVNLNGIRSAVKKGFLDWMNRSGSDFVCLQEIKAQSCDITPEVATPDGYQGYFEC 60 Query: 76 AVKKGYSGVGVYSKRTPNAVRIGFGVQEFDDEGRYVECDFGDLTVISLYCPSGSSSEERQ 135 A KKGYSG G+Y+K P+ + GFG +EFD EGRY +CDF D +++SLY PSGSSS ERQ Sbjct: 61 AEKKGYSGTGIYTKTMPDKIENGFGSKEFDAEGRYFQCDFRDFSLVSLYAPSGSSSPERQ 120 Query: 136 QAKFRFMEVFLPHLQELKNSGREIVICGDWNIAHKEIDLKNWKSNQKNSGFLPEERAWLT 195 +AKFRFM+ F P+L++LK+SGRE VICGDWNIAHKEIDLKNWKSNQKNSGFLPEERAWLT Sbjct: 121 EAKFRFMDEFYPYLKKLKDSGREFVICGDWNIAHKEIDLKNWKSNQKNSGFLPEERAWLT 180 Query: 196 RVFDELGLVDVYRTIHPETTGDAYTWWSNRGQAWANNVGWRIDYHIATAGIAKKAKTAAI 255 VFDELG VDVYR +HP+TTG+AYTWWSNRGQA+A NVGWRIDY IAT GIAKKA +A I Sbjct: 181 DVFDELGWVDVYRLLHPDTTGEAYTWWSNRGQAYAKNVGWRIDYQIATPGIAKKAVSADI 240 Query: 256 YKTARFSDHSPLTIDY 271 YK RFSDH+PLTI Y Sbjct: 241 YKGERFSDHAPLTIRY 256